Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_G14
(649 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U21321-2|AAG00050.1| 489|Caenorhabditis elegans Cytochrome p450... 48 8e-06
Z79605-1|CAB01904.1| 719|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z29967-2|CAA82855.1| 722|Caenorhabditis elegans lin-15A protein. 28 5.0
U10413-2|AAA20090.1| 719|Caenorhabditis elegans lin-15A protein... 28 5.0
U10411-1|AAA20087.1| 719|Caenorhabditis elegans lin-15A protein... 28 5.0
U58753-8|AAC24439.1| 633|Caenorhabditis elegans Hypothetical pr... 28 6.6
U58753-7|AAC24433.1| 581|Caenorhabditis elegans Hypothetical pr... 28 6.6
U41749-2|AAB52486.2| 308|Caenorhabditis elegans Hypothetical pr... 28 6.6
U41026-6|AAA82353.1| 1081|Caenorhabditis elegans Hypothetical pr... 28 6.6
>U21321-2|AAG00050.1| 489|Caenorhabditis elegans Cytochrome p450
family protein 44A1 protein.
Length = 489
Score = 47.6 bits (108), Expect = 8e-06
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Frame = +1
Query: 235 NCNGPDWWRLRSIFQKNFTSPQSVKTHVSDTDNIAKEFVEWI-KRDKVSSKNDFLTFLNR 411
N NGP+W+RLRS Q PQSV+T++ + ++ + V + + K D R
Sbjct: 132 NLNGPEWYRLRSSVQHAMMRPQSVQTYLPFSQIVSNDLVCHVADQQKRFGLVDMQKVAGR 191
Query: 412 LNLEIIGVVAFNERFNSFALSEQDPESRSSKTIAAAFGSNSGVMKLDKGFLWKMFSTPLY 591
+LE G + F + S L + + + S M+L ++++FSTP +
Sbjct: 192 WSLESAGQILFEKSLGS--LGNRSEWADGLIELNKKIFQLSAKMRLGLP-IFRLFSTPSW 248
Query: 592 KKLVN 606
+K+V+
Sbjct: 249 RKMVD 253
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 170 FEDIPGPRSYPIIGTLHKYLPLIATD 247
F +IPGPR P+IG + + + +D
Sbjct: 30 FSEIPGPREIPVIGNIGYFKYAVKSD 55
>Z79605-1|CAB01904.1| 719|Caenorhabditis elegans Hypothetical
protein ZK678.1 protein.
Length = 719
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2
Query: 254 GGDSEAYFKRISRVHKVLKLTSRTPIISQKNSL 352
G D KR+ +HK K+TS TP+ S KNS+
Sbjct: 296 GHDIYRALKRVGDLHKG-KVTSNTPLYSFKNSI 327
>Z29967-2|CAA82855.1| 722|Caenorhabditis elegans lin-15A protein.
Length = 722
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2
Query: 254 GGDSEAYFKRISRVHKVLKLTSRTPIISQKNSL 352
G D KR+ +HK K+TS TP+ S KNS+
Sbjct: 296 GHDIYRALKRVGDLHKG-KVTSNTPLYSFKNSI 327
>U10413-2|AAA20090.1| 719|Caenorhabditis elegans lin-15A protein
protein.
Length = 719
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2
Query: 254 GGDSEAYFKRISRVHKVLKLTSRTPIISQKNSL 352
G D KR+ +HK K+TS TP+ S KNS+
Sbjct: 296 GHDIYRALKRVGDLHKG-KVTSNTPLYSFKNSI 327
>U10411-1|AAA20087.1| 719|Caenorhabditis elegans lin-15A protein
protein.
Length = 719
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2
Query: 254 GGDSEAYFKRISRVHKVLKLTSRTPIISQKNSL 352
G D KR+ +HK K+TS TP+ S KNS+
Sbjct: 296 GHDIYRALKRVGDLHKG-KVTSNTPLYSFKNSI 327
>U58753-8|AAC24439.1| 633|Caenorhabditis elegans Hypothetical
protein W03B1.9 protein.
Length = 633
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +1
Query: 292 SPQSVKTHVSDTDNIAKEF--VEWIKRDKVSSKNDFLTFLNRLNL 420
SP ++ H N+A +F +EW +D S+ D L NRLN+
Sbjct: 341 SPNFLRNHDVIIGNLAWQFSLIEW--KDNNGSRRDVLELRNRLNV 383
>U58753-7|AAC24433.1| 581|Caenorhabditis elegans Hypothetical
protein W03B1.5 protein.
Length = 581
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +1
Query: 292 SPQSVKTHVSDTDNIAKEF--VEWIKRDKVSSKNDFLTFLNRLNL 420
SP ++ H N+A +F +EW +D S+ D L NRLN+
Sbjct: 289 SPNFLRNHDVIIGNLAWQFSLIEW--KDNNGSRRDVLELRNRLNV 331
>U41749-2|AAB52486.2| 308|Caenorhabditis elegans Hypothetical
protein F09E10.5 protein.
Length = 308
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 170 NS*DYLPVH*PYWHVHYPQNFQTLF 96
N D LP H H H+P NF+ L+
Sbjct: 31 NQLDVLPNHMELCHKHWPDNFEALY 55
>U41026-6|AAA82353.1| 1081|Caenorhabditis elegans Hypothetical
protein C28G1.4 protein.
Length = 1081
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +1
Query: 298 QSVKTHVSDT--DNIAKEFVEWIKRDKVSSKNDFLTFLNRLNLEI 426
Q ++ H D DN+ K + + +++ K+ + LNRLN I
Sbjct: 850 QHLRIHNIDVTDDNVVKAYAKHVRQQKIEEGRARMALLNRLNAAI 894
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,940,071
Number of Sequences: 27780
Number of extensions: 284490
Number of successful extensions: 786
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 786
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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