Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_G14
         (649 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    35   8e-04
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   2.5  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   2.5  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    23   3.4  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   4.4  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   5.9  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    21   7.8  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 34.7 bits (76), Expect = 8e-04
 Identities = 32/140 (22%), Positives = 55/140 (39%), Gaps = 3/140 (2%)
 Frame = +1

Query: 235 NCNGPDWWRLRSIFQKNFTSPQSVKTHVSDTDNIAKEFVEWIKRDKVSSK-NDFLTFLNR 411
           N  G  W  LR       T+  +V       + +A  F+E I+R +V  K   F     +
Sbjct: 150 NEQGQTWHDLRVALTSELTAASTVLGFFPALNIVADSFIELIRRQRVGYKVTGFEELAYK 209

Query: 412 LNLEIIGVVAFNERFNSFAL-SEQDPESRSSKTIAAAF-GSNSGVMKLDKGFLWKMFSTP 585
           + LE    +            S  +  +R ++ +   F  S      L    LWK+  T 
Sbjct: 210 MGLESTCTLILGRHLGFLKPDSSSELATRLAEAVRIHFTASRDAFYGLP---LWKLLPTC 266

Query: 586 LYKKLVNSQIYLXKISTDIL 645
            YK+L+ S+  +  I ++I+
Sbjct: 267 AYKQLIESEDAIYNIISEII 286


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 331 NIAKEFVEWIKRDKVSSKNDFLTFLN 408
           N+ ++F+ W K+    S+N   T LN
Sbjct: 76  NVVQKFLWWYKQGMFLSRNAIFTPLN 101


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 331 NIAKEFVEWIKRDKVSSKNDFLTFLN 408
           N+ ++F+ W K+    S+N   T LN
Sbjct: 76  NVVQKFLWWYKQGMFLSRNAIFTPLN 101


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +1

Query: 544 KLDKGFLWKMFSTPLYKKLVNSQIYLXKISTDILI 648
           K+DK FL KM +   Y  ++ +  +  ++S D+L+
Sbjct: 275 KIDKWFLHKMKNIIDYYLVLENTDHTKQLSHDVLL 309


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 173 EDIPGPRSYPIIG 211
           E IPGP + P+IG
Sbjct: 42  EKIPGPPALPLIG 54


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +1

Query: 307 KTHVSDTDNIAKEFVEWIKRDKVSSKNDFLTFLNRLNLEIIGVVAFNER 453
           KT  + TD+  + F E ++  KVS++    T       E+I     N+R
Sbjct: 536 KTVRTPTDSYIRSFFELLQNPKVSNEQFLNTAATLSFCEMIHNAQVNKR 584


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/43 (23%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +3

Query: 66  FPTGRGNVFTEERLKILWVVNMP-VRSMNREIIS*ISKIYRDL 191
           +PTGRG    +++  ++W      +R ++ ++   + ++YR L
Sbjct: 203 WPTGRGIYHNDDKTFLVWCNEEDHLRIISMQMGGDLGQVYRRL 245


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,810
Number of Sequences: 438
Number of extensions: 3632
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)