Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_G11
         (461 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M64716-1|AAA16105.1|  125|Homo sapiens ribosomal protein protein.     113   3e-25
BC004986-1|AAH04986.1|  125|Homo sapiens ribosomal protein S25 p...   113   3e-25
BC004294-1|AAH04294.1|  125|Homo sapiens ribosomal protein S25 p...   113   3e-25
BC003537-1|AAH03537.1|  125|Homo sapiens ribosomal protein S25 p...   113   3e-25
AB061844-1|BAB79482.1|  125|Homo sapiens ribosomal protein S25 p...   113   3e-25
AK097034-1|BAC04932.1|  120|Homo sapiens protein ( Homo sapiens ...    31   1.9  
BC028615-1|AAH28615.1|  408|Homo sapiens solute carrier family 3...    29   7.8  

>M64716-1|AAA16105.1|  125|Homo sapiens ribosomal protein protein.
          Length = 125

 Score =  113 bits (272), Expect = 3e-25
 Identities = 58/77 (75%), Positives = 61/77 (79%)
 Frame = +3

Query: 144 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQH 323
           LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL  KGLIK V +H
Sbjct: 44  LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103

Query: 324 HGQVIYTRATKGDDPVA 374
             QVIYTR TKG D  A
Sbjct: 104 RAQVIYTRNTKGGDAPA 120


>BC004986-1|AAH04986.1|  125|Homo sapiens ribosomal protein S25
           protein.
          Length = 125

 Score =  113 bits (272), Expect = 3e-25
 Identities = 58/77 (75%), Positives = 61/77 (79%)
 Frame = +3

Query: 144 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQH 323
           LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL  KGLIK V +H
Sbjct: 44  LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103

Query: 324 HGQVIYTRATKGDDPVA 374
             QVIYTR TKG D  A
Sbjct: 104 RAQVIYTRNTKGGDAPA 120


>BC004294-1|AAH04294.1|  125|Homo sapiens ribosomal protein S25
           protein.
          Length = 125

 Score =  113 bits (272), Expect = 3e-25
 Identities = 58/77 (75%), Positives = 61/77 (79%)
 Frame = +3

Query: 144 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQH 323
           LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL  KGLIK V +H
Sbjct: 44  LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103

Query: 324 HGQVIYTRATKGDDPVA 374
             QVIYTR TKG D  A
Sbjct: 104 RAQVIYTRNTKGGDAPA 120


>BC003537-1|AAH03537.1|  125|Homo sapiens ribosomal protein S25
           protein.
          Length = 125

 Score =  113 bits (272), Expect = 3e-25
 Identities = 58/77 (75%), Positives = 61/77 (79%)
 Frame = +3

Query: 144 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQH 323
           LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL  KGLIK V +H
Sbjct: 44  LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103

Query: 324 HGQVIYTRATKGDDPVA 374
             QVIYTR TKG D  A
Sbjct: 104 RAQVIYTRNTKGGDAPA 120


>AB061844-1|BAB79482.1|  125|Homo sapiens ribosomal protein S25
           protein.
          Length = 125

 Score =  113 bits (272), Expect = 3e-25
 Identities = 58/77 (75%), Positives = 61/77 (79%)
 Frame = +3

Query: 144 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQH 323
           LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL  KGLIK V +H
Sbjct: 44  LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103

Query: 324 HGQVIYTRATKGDDPVA 374
             QVIYTR TKG D  A
Sbjct: 104 RAQVIYTRNTKGGDAPA 120


>AK097034-1|BAC04932.1|  120|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39715 fis, clone SMINT2013228. ).
          Length = 120

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
 Frame = -3

Query: 204 VGLPCTVSHTWVYQTTPGCSTCH---ELFLWTTSSSWLCRHRILPSSSVFFEAVWPKPSR 34
           +GL  T +HTW Y+  P CS C+    ++++ T       H   P  S   + V  +P+ 
Sbjct: 20  LGLLHTHTHTWYYRCEPTCSACYTHTNIYIFKTEF-----HSYCPGWSAMRDLVSLQPAT 74

Query: 33  PSWAASL--NW 7
            +   SL  NW
Sbjct: 75  SASCLSLPSNW 85


>BC028615-1|AAH28615.1|  408|Homo sapiens solute carrier family 35,
           member F1 protein.
          Length = 408

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
 Frame = -2

Query: 328 PWCWTTCLMRP------FSLSS-MSALLAREPRT-FNLSDTTAGVISLYCGTSLYSFSYV 173
           PW W   L+        F L S M  ++ +   T  NLS  TA + SL+CG  L+ + + 
Sbjct: 277 PWDWQIGLLYVGFSACMFGLYSFMQVVIKKTSATSVNLSLLTADLYSLFCGLFLFHYKFS 336

Query: 172 GL 167
           GL
Sbjct: 337 GL 338


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,623,984
Number of Sequences: 237096
Number of extensions: 1528505
Number of successful extensions: 3341
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3340
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3929066862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)