BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_G07
(655 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ438610-7|CAD27479.1| 86|Anopheles gambiae hypothetical prote... 24 3.7
>AJ438610-7|CAD27479.1| 86|Anopheles gambiae hypothetical protein
protein.
Length = 86
Score = 24.2 bits (50), Expect = 3.7
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +3
Query: 249 QKGVKPQEGPRKSNVLDRKLVTEAPLVKDIIKYHATYHQDVYSQN 383
+ G KPQE + + + R+L P V + ++ H+D S N
Sbjct: 38 EDGYKPQEQRKLAMKVKRRLPGGPPSVCPVWRHGQRKHKDASSYN 82
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 641,732
Number of Sequences: 2352
Number of extensions: 12582
Number of successful extensions: 23
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -