Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_G05
         (562 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical ...    32   0.32 
AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical...    32   0.32 
AF106589-3|AAT81179.1|  511|Caenorhabditis elegans Hypothetical ...    28   5.3  
Z81050-3|CAB02849.1|  291|Caenorhabditis elegans Hypothetical pr...    27   7.0  
AL021448-3|CAA16275.1|  291|Caenorhabditis elegans Hypothetical ...    27   7.0  
AF016427-10|AAB65348.1|  301|Caenorhabditis elegans Hypothetical...    27   7.0  
AC024785-5|AAF60596.1|  577|Caenorhabditis elegans C-type lectin...    27   7.0  
Z48006-4|CAA88048.1|  429|Caenorhabditis elegans Hypothetical pr...    27   9.2  

>AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical
           protein Y57A10A.1 protein.
          Length = 1342

 Score = 31.9 bits (69), Expect = 0.32
 Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
 Frame = -1

Query: 418 DMNGIASPSRP-AEXXPLSQRTXIPRYSPPLRIPGLSISTLS 296
           D++G ++ SRP A+  P+S R  +P+ S P +I    +STL+
Sbjct: 328 DLHGTSTQSRPEAQKTPVSTRKFVPQASLPTKIWKYPVSTLN 369


>AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical
           protein Y57A10A.1 protein.
          Length = 1342

 Score = 31.9 bits (69), Expect = 0.32
 Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
 Frame = -1

Query: 418 DMNGIASPSRP-AEXXPLSQRTXIPRYSPPLRIPGLSISTLS 296
           D++G ++ SRP A+  P+S R  +P+ S P +I    +STL+
Sbjct: 328 DLHGTSTQSRPEAQKTPVSTRKFVPQASLPTKIWKYPVSTLN 369


>AF106589-3|AAT81179.1|  511|Caenorhabditis elegans Hypothetical
           protein Y44E3A.4 protein.
          Length = 511

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = -1

Query: 451 VVXGKGSGSDQDMNG-IASPSRPAEXXPLSQRTXIPRYSPPLRIPGLSISTLS 296
           +V  +   SD+  NG ++SP+  +   P+S    +P  +  + IP  S +T S
Sbjct: 415 MVMNRNRSSDESPNGRLSSPTSISTVNPMSASMFVPATAKEISIPSNSSATSS 467


>Z81050-3|CAB02849.1|  291|Caenorhabditis elegans Hypothetical
           protein C50B6.4 protein.
          Length = 291

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 17/58 (29%), Positives = 23/58 (39%)
 Frame = -1

Query: 556 VSQGVAAYNGSCYRCSRWHXDFPGACGTPACAESDVVXGKGSGSDQDMNGIASPSRPA 383
           V+ G+ +  G C +C        G  G P  A  D   G+     Q   G A P+ PA
Sbjct: 119 VAVGIVSEGGPCIKCPAGEPGPAGEAGAPGPAGPDGQPGQDGQGGQP--GPAGPAGPA 174


>AL021448-3|CAA16275.1|  291|Caenorhabditis elegans Hypothetical
           protein Y2H9A.3 protein.
          Length = 291

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 17/58 (29%), Positives = 23/58 (39%)
 Frame = -1

Query: 556 VSQGVAAYNGSCYRCSRWHXDFPGACGTPACAESDVVXGKGSGSDQDMNGIASPSRPA 383
           V+ G+ +  G C +C        G  G P  A  D   G+     Q   G A P+ PA
Sbjct: 119 VAVGIVSEGGPCIKCPAGEPGPAGEAGAPGPAGPDGQPGQDGQGGQP--GPAGPAGPA 174


>AF016427-10|AAB65348.1|  301|Caenorhabditis elegans Hypothetical
           protein F32D1.7 protein.
          Length = 301

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -1

Query: 442 GKGSGSDQDMNGIASPSRPAEXXPLSQRTXIPRYSP 335
           G GSGS  D +G + P+R +   P +     PR  P
Sbjct: 159 GSGSGSGNDSSGSSGPTRMSGQVPSTSGPPPPRPPP 194


>AC024785-5|AAF60596.1|  577|Caenorhabditis elegans C-type lectin
           protein 73 protein.
          Length = 577

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +3

Query: 219 SDPMYEVMIGGWGNAKSVIRKNRTK 293
           S+P YEV++GG   A  V+ +N+ K
Sbjct: 334 SNPHYEVVLGGKKTANFVVEENKIK 358


>Z48006-4|CAA88048.1|  429|Caenorhabditis elegans Hypothetical
           protein F19C6.3 protein.
          Length = 429

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 5/39 (12%)
 Frame = -1

Query: 547 GVAAYNGSCYRCSRW----HXDFPGA-CGTPACAESDVV 446
           G   + G CYRC  W    H     A C  P+C E D V
Sbjct: 286 GEVFWPGDCYRCQCWDKKVHCSSEYATCEPPSCPEEDWV 324


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,112,178
Number of Sequences: 27780
Number of extensions: 243772
Number of successful extensions: 735
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 735
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)