Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_G03
(480 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161 82 2e-16
01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129 68 3e-12
02_04_0074 - 19474786-19474812,19475174-19475400,19476362-194764... 68 5e-12
07_01_1001 - 8460467-8460799 50 7e-07
07_03_0321 + 16757414-16757743 48 3e-06
01_06_0098 - 26416768-26416998 31 0.37
07_03_0583 - 19684388-19684498,19685083-19685216,19685765-196858... 29 1.5
11_01_0139 - 1159748-1160173,1160229-1160301,1161600-1161877 29 2.0
12_01_0140 - 1088400-1088843 29 2.6
01_01_0049 - 373980-374148,374407-374451,375003-375149,375647-37... 29 2.6
12_01_0090 + 717524-719080 28 4.5
10_08_0104 + 14824122-14824178,14824274-14824318,14824419-148245... 28 4.5
06_01_0018 + 194295-194640,194679-194917,195737-195885,196248-19... 28 4.5
12_01_0141 - 1091579-1091983 27 6.0
09_04_0360 - 16944990-16945202,16945288-16945377,16945525-169457... 27 6.0
07_01_0461 + 3492302-3492413,3492868-3492964,3493053-3493131,349... 27 7.9
01_01_1092 - 8593414-8593776,8597750-8597931,8598080-8598152 27 7.9
>05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161
Length = 113
Score = 82.2 bits (194), Expect = 2e-16
Identities = 36/62 (58%), Positives = 52/62 (83%)
Frame = +3
Query: 69 LAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVG 248
LAVLGG T+P+A D++ IL SVG+EA+ E+L+ +++EL GKD+ ++IAAGREK +S+P G
Sbjct: 9 LAVLGGNTSPSADDIKNILESVGVEANDERLEFLLSELEGKDITEVIAAGREKFASVPSG 68
Query: 249 GG 254
GG
Sbjct: 69 GG 70
>01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129
Length = 114
Score = 68.1 bits (159), Expect = 3e-12
Identities = 29/62 (46%), Positives = 45/62 (72%)
Frame = +3
Query: 69 LAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVG 248
+A L G ++P A D+ IL SVG E D K++ ++++++GKD+ +LIA GREK +S+P G
Sbjct: 9 MAYLAGNSSPTAEDLTTILESVGCEIDNAKMELLLSQVSGKDITELIACGREKFASVPSG 68
Query: 249 GG 254
GG
Sbjct: 69 GG 70
>02_04_0074 -
19474786-19474812,19475174-19475400,19476362-19476496,
19478662-19479193
Length = 306
Score = 67.7 bits (158), Expect = 5e-12
Identities = 30/62 (48%), Positives = 44/62 (70%)
Frame = +3
Query: 69 LAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVG 248
LA L G P+A D+ IL SVG E D K++ ++++L GKD+ ++IA+GREK +S+P G
Sbjct: 202 LATLAGNPNPSAEDLTTILESVGAEVDHGKMELLLSQLAGKDITEIIASGREKFASVPCG 261
Query: 249 GG 254
GG
Sbjct: 262 GG 263
>07_01_1001 - 8460467-8460799
Length = 110
Score = 50.4 bits (115), Expect = 7e-07
Identities = 23/60 (38%), Positives = 37/60 (61%)
Frame = +3
Query: 69 LAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVG 248
+A +GG +P DV IL +VG + D +KL + ++ GKD+ +++AAG E L+ VG
Sbjct: 9 MATIGGNASPTKDDVRAILGAVGADVDEDKLGYLFDQVAGKDLSEILAAGSEMLAFGGVG 68
>07_03_0321 + 16757414-16757743
Length = 109
Score = 48.4 bits (110), Expect = 3e-06
Identities = 21/55 (38%), Positives = 35/55 (63%)
Frame = +3
Query: 69 LAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLS 233
+A +GG +P DV IL +VG + D +KL + ++ GKD+ +++AAG E L+
Sbjct: 9 MATIGGNASPTKDDVRAILGAVGADIDEDKLGYLFDQVAGKDLAEILAAGSEMLA 63
>01_06_0098 - 26416768-26416998
Length = 76
Score = 31.5 bits (68), Expect = 0.37
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 96 PAAADVEKILSSVGIEADGEKLKKVITELNGKD 194
P V KI+ +V IEAD + K ++ L GKD
Sbjct: 16 PPPPAVVKIIETVHIEADSAEFKSIVQRLTGKD 48
>07_03_0583 -
19684388-19684498,19685083-19685216,19685765-19685888,
19685982-19686251,19686961-19687155,19687236-19687328,
19687411-19687539,19687646-19689277
Length = 895
Score = 29.5 bits (63), Expect = 1.5
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 101 SWRGLATQHSQVNTRPRNAFFK 36
SW+GL ++SQ N RP FF+
Sbjct: 863 SWKGLIDRYSQANLRPEILFFE 884
>11_01_0139 - 1159748-1160173,1160229-1160301,1161600-1161877
Length = 258
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +3
Query: 87 KTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIA 212
KTT E +L+ + DG+K KKV+ L ++VE+L++
Sbjct: 137 KTTTEDDHEEVLLAYRSRKEDGKKRKKVVRRLGKEEVERLLS 178
Score = 27.5 bits (58), Expect = 6.0
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = +3
Query: 147 DGEKLKKVITELNGKDVEQLIA 212
DG+K+KKV+ L ++VE+L++
Sbjct: 36 DGKKMKKVVKRLGKEEVERLLS 57
>12_01_0140 - 1088400-1088843
Length = 147
Score = 28.7 bits (61), Expect = 2.6
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = +3
Query: 87 KTTPAAADVEKILSSVGI--EADGEKLKKVITELNGKDVEQLIA 212
KTT D E++L + + DG+K KKV+ L ++VE+L++
Sbjct: 25 KTTTTEDDHEEVLLAYRPREKEDGKKRKKVVRRLGKEEVERLLS 68
>01_01_0049 -
373980-374148,374407-374451,375003-375149,375647-375768,
375938-376042,376123-376234,376314-376381,376617-376766,
377471-377533,377616-377741,377841-377963,378206-378387,
379398-379488
Length = 500
Score = 28.7 bits (61), Expect = 2.6
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +3
Query: 48 VTWPRIYLAVLGGKTTPAAADVEKILSSVGIEAD--GEKLKKVITELNGKDVEQLIAAGR 221
VTWPR+ L LG T A +V+ + A G + V++ N K VE I
Sbjct: 372 VTWPRLDLCKLGSLTFKAPDNVKYPSMDLAYAAGRAGGTMTGVLSAANEKAVELFIDENH 431
Query: 222 EKL 230
+K+
Sbjct: 432 QKV 434
>12_01_0090 + 717524-719080
Length = 518
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -3
Query: 250 PPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIF 116
PP + S P ++ S+S SS + + + S S+PT L F
Sbjct: 60 PPAVLSPSLVCPVIVAFSSSQAPSSALLLFNHASSCSLPTPLPTF 104
>10_08_0104 +
14824122-14824178,14824274-14824318,14824419-14824536,
14825522-14825581,14825783-14825891,14825972-14826197,
14826274-14826390,14826510-14826611
Length = 277
Score = 27.9 bits (59), Expect = 4.5
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 72 AVLGGKTTPAAADVEKILSSVGIEADGEKLK 164
A+L GK TP D+E+ L + G GE++K
Sbjct: 14 ALLRGKETPVILDLEESLRAKGDMTQGEEVK 44
>06_01_0018 + 194295-194640,194679-194917,195737-195885,196248-196342,
196685-196780,197248-197399,198683-198823,199068-199319,
199463-199603,199686-200003,200146-200232,201025-202006,
202091-202179,202968-203072,203155-204306,204844-205359,
205455-205650,206299-207182
Length = 1979
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -2
Query: 191 LAVELSDYFLKLLTVSFDTDGAEDLLNVSGSWRGLATQHSQVNTR 57
L EL DY LK VS + G N++ WR + ++N R
Sbjct: 1035 LCEELLDYILKNHQVSQEPKGILHAFNIALCWRAASLLKHKINRR 1079
>12_01_0141 - 1091579-1091983
Length = 134
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +3
Query: 141 EADGEKLKKVITELNGKDVEQLIA 212
E DG+K KKV+ L ++VE+L++
Sbjct: 30 EEDGKKRKKVVRRLGKEEVERLLS 53
>09_04_0360 -
16944990-16945202,16945288-16945377,16945525-16945746,
16945854-16946081,16946163-16946372
Length = 320
Score = 27.5 bits (58), Expect = 6.0
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = +3
Query: 42 KCVTWPRIYLAVLGGKTTPAAADVEKILSSVGI---EADGEKLKKVITELNGKDVEQLI 209
KC+ P +Y + L ++ +A +++++ + + D +K+K V GKD+E I
Sbjct: 239 KCIYNPSMYFSKLLHRSLQCSATNKRLVTRAILGSDDVDMDKIKSVFKSSYGKDLEDFI 297
>07_01_0461 +
3492302-3492413,3492868-3492964,3493053-3493131,
3493484-3493794,3494219-3494231
Length = 203
Score = 27.1 bits (57), Expect = 7.9
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3
Query: 253 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIP 134
PPP PAA+ S S+P S+V+ ++ PSA +P
Sbjct: 122 PPPEPTPTPAPAPAAVPPSASVP-STVVPPVAAPPSALLP 160
>01_01_1092 - 8593414-8593776,8597750-8597931,8598080-8598152
Length = 205
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = -3
Query: 163 LSFSPSASIPTELRI--FSTSAAAGVVLPPSTAK*IR 59
LS+SPSAS T+L I + + A V PPS++ +R
Sbjct: 114 LSYSPSASSITDLPIAPYPLNYAVAPVAPPSSSSDLR 150
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,435,128
Number of Sequences: 37544
Number of extensions: 166161
Number of successful extensions: 534
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 533
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 991020332
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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