Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_G03
         (480 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X05016-1|CAA28672.1|  113|Drosophila melanogaster r-protein prot...    92   4e-19
AE013599-2313|AAS64838.1|  113|Drosophila melanogaster CG4918-PB...    92   4e-19
AE013599-2312|AAF57979.1|  113|Drosophila melanogaster CG4918-PA...    92   4e-19
X05466-1|CAA29026.1|  113|Drosophila melanogaster r ribosomal pr...    91   5e-19
AY119253-1|AAM51113.1|  113|Drosophila melanogaster SD22208p pro...    91   5e-19
M25772-1|AAA53372.1|  317|Drosophila melanogaster DNA repair pro...    32   0.35 
BT021447-1|AAX33595.1|  317|Drosophila melanogaster GH01513p pro...    32   0.35 
AY075528-1|AAL68335.1|  317|Drosophila melanogaster RE74511p pro...    32   0.35 
AE014296-3653|AAF51807.1|  317|Drosophila melanogaster CG7490-PA...    32   0.35 
AY069572-1|AAL39717.1|  510|Drosophila melanogaster LD31122p pro...    30   1.9  
AY060416-1|AAL25455.1|  358|Drosophila melanogaster LD37618p pro...    30   1.9  
AE014296-2923|AAF49329.1|  680|Drosophila melanogaster CG6311-PB...    30   1.9  
AE014297-3702|AAF56388.3|  977|Drosophila melanogaster CG11819-P...    29   4.4  

>X05016-1|CAA28672.1|  113|Drosophila melanogaster r-protein
           protein.
          Length = 113

 Score = 91.9 bits (218), Expect = 4e-19
 Identities = 44/62 (70%), Positives = 51/62 (82%)
 Frame = +3

Query: 69  LAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVG 248
           LAVLGGK +PA +D+EKILSSVG+E D E+L KVI EL GK ++ LI  GREKLSSMPVG
Sbjct: 9   LAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVG 68

Query: 249 GG 254
           GG
Sbjct: 69  GG 70


>AE013599-2313|AAS64838.1|  113|Drosophila melanogaster CG4918-PB,
           isoform B protein.
          Length = 113

 Score = 91.9 bits (218), Expect = 4e-19
 Identities = 44/62 (70%), Positives = 51/62 (82%)
 Frame = +3

Query: 69  LAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVG 248
           LAVLGGK +PA +D+EKILSSVG+E D E+L KVI EL GK ++ LI  GREKLSSMPVG
Sbjct: 9   LAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVG 68

Query: 249 GG 254
           GG
Sbjct: 69  GG 70


>AE013599-2312|AAF57979.1|  113|Drosophila melanogaster CG4918-PA,
           isoform A protein.
          Length = 113

 Score = 91.9 bits (218), Expect = 4e-19
 Identities = 44/62 (70%), Positives = 51/62 (82%)
 Frame = +3

Query: 69  LAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVG 248
           LAVLGGK +PA +D+EKILSSVG+E D E+L KVI EL GK ++ LI  GREKLSSMPVG
Sbjct: 9   LAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVG 68

Query: 249 GG 254
           GG
Sbjct: 69  GG 70


>X05466-1|CAA29026.1|  113|Drosophila melanogaster r ribosomal
           protein protein.
          Length = 113

 Score = 91.5 bits (217), Expect = 5e-19
 Identities = 44/62 (70%), Positives = 50/62 (80%)
 Frame = +3

Query: 69  LAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVG 248
           LAVLGGK +PA  D+EKILSSVG+E D E+L KVI EL GK ++ LI  GREKLSSMPVG
Sbjct: 9   LAVLGGKDSPANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVG 68

Query: 249 GG 254
           GG
Sbjct: 69  GG 70


>AY119253-1|AAM51113.1|  113|Drosophila melanogaster SD22208p
           protein.
          Length = 113

 Score = 91.5 bits (217), Expect = 5e-19
 Identities = 44/62 (70%), Positives = 50/62 (80%)
 Frame = +3

Query: 69  LAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVG 248
           LAVLGGK +PA  D+EKILSSVG+E D E+L KVI EL GK ++ LI  GREKLSSMPVG
Sbjct: 9   LAVLGGKDSPANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVG 68

Query: 249 GG 254
           GG
Sbjct: 69  GG 70


>M25772-1|AAA53372.1|  317|Drosophila melanogaster DNA repair
           protein protein.
          Length = 317

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 20/50 (40%), Positives = 24/50 (48%)
 Frame = -2

Query: 194 ILAVELSDYFLKLLTVSFDTDGAEDLLNVSGSWRGLATQHSQVNTRPRNA 45
           I  VEL D F K   V  D  G++ + N+  S RGLA      NT  R A
Sbjct: 15  IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMMRKA 64


>BT021447-1|AAX33595.1|  317|Drosophila melanogaster GH01513p
           protein.
          Length = 317

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 20/50 (40%), Positives = 24/50 (48%)
 Frame = -2

Query: 194 ILAVELSDYFLKLLTVSFDTDGAEDLLNVSGSWRGLATQHSQVNTRPRNA 45
           I  VEL D F K   V  D  G++ + N+  S RGLA      NT  R A
Sbjct: 15  IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMMRKA 64


>AY075528-1|AAL68335.1|  317|Drosophila melanogaster RE74511p
           protein.
          Length = 317

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 20/50 (40%), Positives = 24/50 (48%)
 Frame = -2

Query: 194 ILAVELSDYFLKLLTVSFDTDGAEDLLNVSGSWRGLATQHSQVNTRPRNA 45
           I  VEL D F K   V  D  G++ + N+  S RGLA      NT  R A
Sbjct: 15  IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMMRKA 64


>AE014296-3653|AAF51807.1|  317|Drosophila melanogaster CG7490-PA
           protein.
          Length = 317

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 20/50 (40%), Positives = 24/50 (48%)
 Frame = -2

Query: 194 ILAVELSDYFLKLLTVSFDTDGAEDLLNVSGSWRGLATQHSQVNTRPRNA 45
           I  VEL D F K   V  D  G++ + N+  S RGLA      NT  R A
Sbjct: 15  IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMMRKA 64


>AY069572-1|AAL39717.1|  510|Drosophila melanogaster LD31122p
           protein.
          Length = 510

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 19/52 (36%), Positives = 29/52 (55%)
 Frame = -3

Query: 253 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAA 98
           PPP GI++   + + +     LPL+ + T  + S S++  T   I STSAAA
Sbjct: 412 PPPCGINEVAIKYSILPI---LPLNGISTATTSSSSSAAATPTPIASTSAAA 460


>AY060416-1|AAL25455.1|  358|Drosophila melanogaster LD37618p
           protein.
          Length = 358

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 19/52 (36%), Positives = 29/52 (55%)
 Frame = -3

Query: 253 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAA 98
           PPP GI++   + + +     LPL+ + T  + S S++  T   I STSAAA
Sbjct: 260 PPPCGINEVAIKYSILPI---LPLNGISTATTSSSSSAAATPTPIASTSAAA 308


>AE014296-2923|AAF49329.1|  680|Drosophila melanogaster CG6311-PB
           protein.
          Length = 680

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 19/52 (36%), Positives = 29/52 (55%)
 Frame = -3

Query: 253 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAA 98
           PPP GI++   + + +     LPL+ + T  + S S++  T   I STSAAA
Sbjct: 582 PPPCGINEVAIKYSILPI---LPLNGISTATTSSSSSAAATPTPIASTSAAA 630


>AE014297-3702|AAF56388.3|  977|Drosophila melanogaster CG11819-PA
           protein.
          Length = 977

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = +3

Query: 111 VEKILSSVGIEADGEKLKKV-ITELNGKDVEQLIAAGREKLSSMPVGG 251
           V KIL   G++   + +K++ +T  +GK   +LI      L S+PV G
Sbjct: 247 VNKILDVKGVKGLSKLMKEIAVTASSGKHDNELIGRAAITLKSIPVSG 294


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,771,547
Number of Sequences: 53049
Number of extensions: 257984
Number of successful extensions: 934
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 934
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1663799760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)