Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_F16
(544 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50479-1|AAA93478.1| 151|Anopheles gambiae protein ( Anopheles ... 246 5e-67
AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein. 25 1.6
AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein. 25 1.6
AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein. 25 1.6
AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein. 25 1.6
AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein. 25 1.6
AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein prot... 25 1.6
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 23 4.9
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 23 4.9
DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2 pro... 23 6.5
AJ439060-9|CAD27760.1| 348|Anopheles gambiae putative translati... 23 8.6
>U50479-1|AAA93478.1| 151|Anopheles gambiae protein ( Anopheles
gambiae putativeribosomal protein S13 mRNA, complete
cds. ).
Length = 151
Score = 246 bits (601), Expect = 5e-67
Identities = 121/156 (77%), Positives = 136/156 (87%), Gaps = 4/156 (2%)
Frame = +1
Query: 67 MGRMHAPG*GY----LPXRRCLTAAVSXTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLR 234
MGRMHAPG G LP RR + + WLKL+A+DVKEQI KLGKKG+TPSQIG++LR
Sbjct: 1 MGRMHAPGKGISKSALPYRRSVPS-----WLKLSAEDVKEQIKKLGKKGMTPSQIGIILR 55
Query: 235 DSHGVAQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRL 414
DSHGVAQVRFV G K+LRIMKA+GL PD+PEDLY+LIKKAV++RKHLERNRKD DSKFRL
Sbjct: 56 DSHGVAQVRFVNGNKVLRIMKAVGLKPDIPEDLYFLIKKAVSIRKHLERNRKDIDSKFRL 115
Query: 415 ILVESRIHRLARYYKTKSVLPPNWKYESSTASALVA 522
IL+ESRIHRLARYYK K+VLPPNWKYESSTASALVA
Sbjct: 116 ILIESRIHRLARYYKIKAVLPPNWKYESSTASALVA 151
>AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 25.0 bits (52), Expect = 1.6
Identities = 10/38 (26%), Positives = 15/38 (39%)
Frame = +3
Query: 174 TNLQTWKEGSHSLTNWCNAEGFTWSCPSKIRNWQKDPP 287
T W + + + T + TWS P+ W PP
Sbjct: 142 TTPSQWTDPTITTTTPIWTDPTTWSAPTTTTTWSDQPP 179
>AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 25.0 bits (52), Expect = 1.6
Identities = 10/38 (26%), Positives = 15/38 (39%)
Frame = +3
Query: 174 TNLQTWKEGSHSLTNWCNAEGFTWSCPSKIRNWQKDPP 287
T W + + + T + TWS P+ W PP
Sbjct: 142 TTPSQWTDPTITTTTPIWTDPTTWSAPTTTTTWSDQPP 179
>AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 25.0 bits (52), Expect = 1.6
Identities = 10/38 (26%), Positives = 15/38 (39%)
Frame = +3
Query: 174 TNLQTWKEGSHSLTNWCNAEGFTWSCPSKIRNWQKDPP 287
T W + + + T + TWS P+ W PP
Sbjct: 142 TTPSQWTDPTITTTTPIWTDPTTWSAPTTTTTWSDQPP 179
>AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 25.0 bits (52), Expect = 1.6
Identities = 10/38 (26%), Positives = 15/38 (39%)
Frame = +3
Query: 174 TNLQTWKEGSHSLTNWCNAEGFTWSCPSKIRNWQKDPP 287
T W + + + T + TWS P+ W PP
Sbjct: 141 TTPSQWTDPTITTTTPVWTDPTTWSAPTTTTTWSDQPP 178
>AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 25.0 bits (52), Expect = 1.6
Identities = 10/38 (26%), Positives = 15/38 (39%)
Frame = +3
Query: 174 TNLQTWKEGSHSLTNWCNAEGFTWSCPSKIRNWQKDPP 287
T W + + + T + TWS P+ W PP
Sbjct: 141 TTPSQWTDPTITTTTPVWTDPTTWSAPTTTTTWSDQPP 178
>AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein
protein.
Length = 373
Score = 25.0 bits (52), Expect = 1.6
Identities = 10/38 (26%), Positives = 15/38 (39%)
Frame = +3
Query: 174 TNLQTWKEGSHSLTNWCNAEGFTWSCPSKIRNWQKDPP 287
T W + + + T + TWS P+ W PP
Sbjct: 142 TTPSQWTDPTITTTTPVWTDPTTWSAPTTTTTWSDQPP 179
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 23.4 bits (48), Expect = 4.9
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +1
Query: 244 GVAQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKK 351
G++ V+F+T ++ I +MG+ L D Y+ ++
Sbjct: 443 GMSTVKFITYQEASEISGSMGVGWSLQVDCVYIDRR 478
>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
Length = 3318
Score = 23.4 bits (48), Expect = 4.9
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +1
Query: 244 GVAQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKK 351
G++ V+F+T ++ I +MG+ L D Y+ ++
Sbjct: 444 GMSTVKFITYQEASEISGSMGVGWSLQVDCVYIDRR 479
>DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2
protein.
Length = 961
Score = 23.0 bits (47), Expect = 6.5
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3
Query: 339 PDQESCCNEETLG 377
P QES CNEE +G
Sbjct: 946 PMQESPCNEEKIG 958
>AJ439060-9|CAD27760.1| 348|Anopheles gambiae putative translation
initiation factor protein.
Length = 348
Score = 22.6 bits (46), Expect = 8.6
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 145 LKLTADDVKEQIYKL 189
LKL ADDVK Q+ L
Sbjct: 95 LKLAADDVKGQVESL 109
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 509,533
Number of Sequences: 2352
Number of extensions: 8775
Number of successful extensions: 33
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50040333
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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