Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_F14
         (576 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY748841-1|AAV28189.1|  158|Anopheles gambiae cytochrome P450 pr...    25   1.8  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    25   1.8  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    23   7.1  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    23   9.4  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    23   9.4  

>AY748841-1|AAV28189.1|  158|Anopheles gambiae cytochrome P450
           protein.
          Length = 158

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = -2

Query: 203 FVVSAFGPVSGHAVFEETASVMADGKC*RSAILFV*I*DNNFVQF-ELIIVFFLRII 36
           F+V AFG +  H   ++     ADG   R     + + D   +Q+ E +I+  LR+I
Sbjct: 40  FLVKAFGYIVQHPEVQQRIQAEADGVLERHGRQVIELTDRAEMQYTEAVIMEALRLI 96


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +2

Query: 437 PPXGWAANCPLPXPMGGSRSP 499
           PP     N PLP PM G R P
Sbjct: 99  PPLLMGPNGPLPPPMMGMRPP 119


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +1

Query: 106 KMADRQHF-PSAITEAVSSNTACPDTGPKA 192
           ++ +R  F PSA+T   SS+  C    PK+
Sbjct: 339 RIHERARFDPSALTSHRSSSANCSSAAPKS 368


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 10/18 (55%), Positives = 11/18 (61%), Gaps = 2/18 (11%)
 Frame = -3

Query: 172 GTPCSKRRLP*W--RMEN 125
           G PCSK   P W  R+EN
Sbjct: 295 GRPCSKAEKPAWMRRLEN 312


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +1

Query: 427  RAQASXRMGSKLPPPXPN 480
            RA    R   +LPPP P+
Sbjct: 1067 RAATQQRQAERLPPPPPS 1084


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 630,252
Number of Sequences: 2352
Number of extensions: 13316
Number of successful extensions: 20
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54665910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)