Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_F14
         (576 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021261-1|AAX33409.1|  429|Drosophila melanogaster RE52861p pro...    42   8e-04
AB232987-1|BAE94193.1|  429|Drosophila melanogaster Rieske-domai...    42   8e-04
AY089390-1|AAL90128.1|  238|Drosophila melanogaster AT21479p pro...    35   0.069
AE014296-2883|AAF49361.1|  238|Drosophila melanogaster CG6485-PA...    35   0.069
AE014296-720|AAF47812.1|  320|Drosophila melanogaster CG12766-PA...    28   7.9  
AE014134-2072|AAZ66459.1|  690|Drosophila melanogaster CG4970-PB...    28   7.9  

>BT021261-1|AAX33409.1|  429|Drosophila melanogaster RE52861p
           protein.
          Length = 429

 Score = 41.5 bits (93), Expect = 8e-04
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +1

Query: 457 KLPPPXPNGWFAVAETRELKVGSVLSIDALGXNFV 561
           +LPPP PNGW+ + ++ +LK G    +  LG + V
Sbjct: 88  ELPPPYPNGWYGILKSSQLKAGEATCVSCLGEDLV 122


>AB232987-1|BAE94193.1|  429|Drosophila melanogaster Rieske-domain
           protein Neverland protein.
          Length = 429

 Score = 41.5 bits (93), Expect = 8e-04
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +1

Query: 457 KLPPPXPNGWFAVAETRELKVGSVLSIDALGXNFV 561
           +LPPP PNGW+ + ++ +LK G    +  LG + V
Sbjct: 88  ELPPPYPNGWYGILKSSQLKAGEATCVSCLGEDLV 122


>AY089390-1|AAL90128.1|  238|Drosophila melanogaster AT21479p
           protein.
          Length = 238

 Score = 35.1 bits (77), Expect = 0.069
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = -1

Query: 546 QGIDREDAANFKLPCFGDREPPIGXGRGQFAAHPXGGLGA--TDPPP 412
           + +D +  AN       D+ PP G   G+FA+ P GGL      PPP
Sbjct: 175 EDLDEKSLANILADLRNDKLPPAGPRNGRFASEPKGGLTTLKIQPPP 221


>AE014296-2883|AAF49361.1|  238|Drosophila melanogaster CG6485-PA
           protein.
          Length = 238

 Score = 35.1 bits (77), Expect = 0.069
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = -1

Query: 546 QGIDREDAANFKLPCFGDREPPIGXGRGQFAAHPXGGLGA--TDPPP 412
           + +D +  AN       D+ PP G   G+FA+ P GGL      PPP
Sbjct: 175 EDLDEKSLANILADLRNDKLPPAGPRNGRFASEPKGGLTTLKIQPPP 221


>AE014296-720|AAF47812.1|  320|Drosophila melanogaster CG12766-PA
           protein.
          Length = 320

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 18/59 (30%), Positives = 29/59 (49%)
 Frame = -2

Query: 302 ANIKVSIKIYSTIELNTCFDDSIVIFFWSSRKMFVVSAFGPVSGHAVFEETASVMADGK 126
           AN K+   I++ IE++   D   +I     +   +V+AF P+  H     T + M DGK
Sbjct: 178 ANCKIK-PIHNQIEVHPALDQKKLIAL-CKKNGILVTAFSPLGRHNAELRTPTFMYDGK 234


>AE014134-2072|AAZ66459.1|  690|Drosophila melanogaster CG4970-PB
           protein.
          Length = 690

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +2

Query: 425 VAPKPPXGWAANCPLPXPMGGSRSPKQGSLKLAASSLSMP 544
           +A   P  W+ + P+P P      PKQ   +   S  S+P
Sbjct: 67  IASTAPSVWSTSVPIPIPSSQRGMPKQNVRRSVVSISSLP 106


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,739,890
Number of Sequences: 53049
Number of extensions: 634447
Number of successful extensions: 2537
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2525
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2276053890
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)