Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_F13
         (525 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X13107-1|CAA31500.1|  153|Drosophila melanogaster protein ( Dros...   267   7e-72
AY113576-1|AAM29581.1|  153|Drosophila melanogaster RH27794p pro...   267   7e-72
AE014297-4796|AAF57188.3|  172|Drosophila melanogaster CG2210-PA...   267   7e-72
BT001459-1|AAN71214.1|  118|Drosophila melanogaster GM19775p pro...   153   2e-37
BT024430-1|ABC86492.1|  153|Drosophila melanogaster IP02578p pro...    57   2e-08
BT029417-1|ABK57074.1|  151|Drosophila melanogaster IP02577p pro...    56   2e-08
AF241152-1|AAF64469.1|  151|Drosophila melanogaster type 6 nucle...    56   2e-08
AF241151-1|AAF64467.1|  151|Drosophila melanogaster type 6 nucle...    56   2e-08
AE014298-2041|AAF48378.2|  151|Drosophila melanogaster CG5310-PA...    56   2e-08
AY069763-1|AAL39908.1|  387|Drosophila melanogaster RE01365p pro...    33   0.18 
AF202050-1|AAF20908.1|  244|Drosophila melanogaster nmdyn-D7 pro...    33   0.18 
AE014297-999|AAF54425.1|  387|Drosophila melanogaster CG8362-PA ...    33   0.18 
X85331-1|CAA59680.1|  437|Drosophila melanogaster msh protein.         33   0.24 
AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA...    32   0.41 
BT003254-1|AAO25011.1| 1074|Drosophila melanogaster LD25748p pro...    28   8.9  
AE014298-958|AAN09188.1| 1074|Drosophila melanogaster CG4532-PE,...    28   8.9  
AE014298-957|AAF46202.1| 1074|Drosophila melanogaster CG4532-PD,...    28   8.9  
AE014298-956|AAN09187.1| 1074|Drosophila melanogaster CG4532-PC,...    28   8.9  
AE014298-955|AAN09186.1| 1074|Drosophila melanogaster CG4532-PB,...    28   8.9  
AE014298-954|AAN09185.1| 1074|Drosophila melanogaster CG4532-PA,...    28   8.9  

>X13107-1|CAA31500.1|  153|Drosophila melanogaster protein (
           Drosophila melanogasterawd mRNA ( abnormal wing disc ).
           ).
          Length = 153

 Score =  267 bits (654), Expect = 7e-72
 Identities = 120/152 (78%), Positives = 136/152 (89%)
 Frame = +1

Query: 70  MAEQRERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRP 249
           MA  +ERTFIMVKPDGVQRGLVG IIERFE+KGFKLV LKF W S+ELL++HY+DL++RP
Sbjct: 1   MAANKERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWASKELLEKHYADLSARP 60

Query: 250 FFPGLVKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPTDSQPGTIRGDLCIQVGRNIIHG 429
           FFPGLV YM+SGPVVPMVWEGLNVVKTGRQMLGATNP DS PGTIRGD CIQVGRNIIHG
Sbjct: 61  FFPGLVNYMNSGPVVPMVWEGLNVVKTGRQMLGATNPADSLPGTIRGDFCIQVGRNIIHG 120

Query: 430 SDSVESAKKXIGLWFTDKEVVGWTPANENXVY 525
           SD+VESA+K I LWF +KE+V WTPA ++ +Y
Sbjct: 121 SDAVESAEKEIALWFNEKELVTWTPAAKDWIY 152


>AY113576-1|AAM29581.1|  153|Drosophila melanogaster RH27794p
           protein.
          Length = 153

 Score =  267 bits (654), Expect = 7e-72
 Identities = 120/152 (78%), Positives = 136/152 (89%)
 Frame = +1

Query: 70  MAEQRERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRP 249
           MA  +ERTFIMVKPDGVQRGLVG IIERFE+KGFKLV LKF W S+ELL++HY+DL++RP
Sbjct: 1   MAANKERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWASKELLEKHYADLSARP 60

Query: 250 FFPGLVKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPTDSQPGTIRGDLCIQVGRNIIHG 429
           FFPGLV YM+SGPVVPMVWEGLNVVKTGRQMLGATNP DS PGTIRGD CIQVGRNIIHG
Sbjct: 61  FFPGLVNYMNSGPVVPMVWEGLNVVKTGRQMLGATNPADSLPGTIRGDFCIQVGRNIIHG 120

Query: 430 SDSVESAKKXIGLWFTDKEVVGWTPANENXVY 525
           SD+VESA+K I LWF +KE+V WTPA ++ +Y
Sbjct: 121 SDAVESAEKEIALWFNEKELVTWTPAAKDWIY 152


>AE014297-4796|AAF57188.3|  172|Drosophila melanogaster CG2210-PA
           protein.
          Length = 172

 Score =  267 bits (654), Expect = 7e-72
 Identities = 120/152 (78%), Positives = 136/152 (89%)
 Frame = +1

Query: 70  MAEQRERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRP 249
           MA  +ERTFIMVKPDGVQRGLVG IIERFE+KGFKLV LKF W S+ELL++HY+DL++RP
Sbjct: 20  MAANKERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWASKELLEKHYADLSARP 79

Query: 250 FFPGLVKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPTDSQPGTIRGDLCIQVGRNIIHG 429
           FFPGLV YM+SGPVVPMVWEGLNVVKTGRQMLGATNP DS PGTIRGD CIQVGRNIIHG
Sbjct: 80  FFPGLVNYMNSGPVVPMVWEGLNVVKTGRQMLGATNPADSLPGTIRGDFCIQVGRNIIHG 139

Query: 430 SDSVESAKKXIGLWFTDKEVVGWTPANENXVY 525
           SD+VESA+K I LWF +KE+V WTPA ++ +Y
Sbjct: 140 SDAVESAEKEIALWFNEKELVTWTPAAKDWIY 171


>BT001459-1|AAN71214.1|  118|Drosophila melanogaster GM19775p
           protein.
          Length = 118

 Score =  153 bits (370), Expect = 2e-37
 Identities = 68/85 (80%), Positives = 78/85 (91%)
 Frame = +1

Query: 73  AEQRERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPF 252
           A  +ERTFIMVKPDGVQRGLVG IIERFE+KGFKLV LKF W S+ELL++HY+DL++RPF
Sbjct: 1   AANKERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWASKELLEKHYADLSARPF 60

Query: 253 FPGLVKYMSSGPVVPMVWEGLNVVK 327
           FPGLV YM+SGPVVPMVWEGLNVV+
Sbjct: 61  FPGLVNYMNSGPVVPMVWEGLNVVQ 85


>BT024430-1|ABC86492.1|  153|Drosophila melanogaster IP02578p
           protein.
          Length = 153

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 3/138 (2%)
 Frame = +1

Query: 76  EQRERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFF 255
           +  E T  ++KP  ++       I     + F ++  K V  ++EL ++ Y++   + F+
Sbjct: 1   QDMEITLALIKPHVLRNTYAMQQIRALISQNFTILDQKEVCITKELSERFYAEHKGKFFY 60

Query: 256 PGLVKYMSSGPVVPMVWEGLNVVKTGRQMLGAT---NPTDSQPGTIRGDLCIQVGRNIIH 426
             L  +M+SGP   ++ +    ++  R +LG T       S P  IR    I   RN  H
Sbjct: 61  HRLTSFMNSGPSYALILQSETCIQKWRSLLGPTKVFRAVYSDPNCIRALYGISDTRNACH 120

Query: 427 GSDSVESAKKXIGLWFTD 480
           GSDS  SA + I + F +
Sbjct: 121 GSDSEASALREISILFPE 138


>BT029417-1|ABK57074.1|  151|Drosophila melanogaster IP02577p
           protein.
          Length = 151

 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 3/135 (2%)
 Frame = +1

Query: 85  ERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPGL 264
           E T  ++KP  ++       I     + F ++  K V  ++EL ++ Y++   + F+  L
Sbjct: 2   EITLALIKPHVLRNTYAMQQIRALISQNFTILDQKEVCITKELSERFYAEHKGKFFYHRL 61

Query: 265 VKYMSSGPVVPMVWEGLNVVKTGRQMLGAT---NPTDSQPGTIRGDLCIQVGRNIIHGSD 435
             +M+SGP   ++ +    ++  R +LG T       S P  IR    I   RN  HGSD
Sbjct: 62  TSFMNSGPSYALILQSETCIQKWRSLLGPTKVFRAVYSDPNCIRALYGISDTRNACHGSD 121

Query: 436 SVESAKKXIGLWFTD 480
           S  SA + I + F +
Sbjct: 122 SEASALREISILFPE 136


>AF241152-1|AAF64469.1|  151|Drosophila melanogaster type 6
           nucleoside diphosphatekinase protein.
          Length = 151

 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 3/135 (2%)
 Frame = +1

Query: 85  ERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPGL 264
           E T  ++KP  ++       I     + F ++  K V  ++EL ++ Y++   + F+  L
Sbjct: 2   EITLALIKPHVLRNTYAMQQIRALISQNFTILDQKEVCITKELSERFYAEHKGKFFYHRL 61

Query: 265 VKYMSSGPVVPMVWEGLNVVKTGRQMLGAT---NPTDSQPGTIRGDLCIQVGRNIIHGSD 435
             +M+SGP   ++ +    ++  R +LG T       S P  IR    I   RN  HGSD
Sbjct: 62  TSFMNSGPSYALILQSETCIQKWRSLLGPTKVFRAVYSDPNCIRALYGISDTRNACHGSD 121

Query: 436 SVESAKKXIGLWFTD 480
           S  SA + I + F +
Sbjct: 122 SEASALREISILFPE 136


>AF241151-1|AAF64467.1|  151|Drosophila melanogaster type 6
           nucleoside diphosphatekinase protein.
          Length = 151

 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 3/135 (2%)
 Frame = +1

Query: 85  ERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPGL 264
           E T  ++KP  ++       I     + F ++  K V  ++EL ++ Y++   + F+  L
Sbjct: 2   EITLALIKPHVLRNTYAMQQIRALISQNFTILDQKEVCITKELSERFYAEHKGKFFYHRL 61

Query: 265 VKYMSSGPVVPMVWEGLNVVKTGRQMLGAT---NPTDSQPGTIRGDLCIQVGRNIIHGSD 435
             +M+SGP   ++ +    ++  R +LG T       S P  IR    I   RN  HGSD
Sbjct: 62  TSFMNSGPSYALILQSETCIQKWRSLLGPTKVFRAVYSDPNCIRALYGISDTRNACHGSD 121

Query: 436 SVESAKKXIGLWFTD 480
           S  SA + I + F +
Sbjct: 122 SEASALREISILFPE 136


>AE014298-2041|AAF48378.2|  151|Drosophila melanogaster CG5310-PA
           protein.
          Length = 151

 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 3/135 (2%)
 Frame = +1

Query: 85  ERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPGL 264
           E T  ++KP  ++       I     + F ++  K V  ++EL ++ Y++   + F+  L
Sbjct: 2   EITLALIKPHVLRNTYAMQQIRALISQNFTILDQKEVCITKELSERFYAEHKGKFFYHRL 61

Query: 265 VKYMSSGPVVPMVWEGLNVVKTGRQMLGAT---NPTDSQPGTIRGDLCIQVGRNIIHGSD 435
             +M+SGP   ++ +    ++  R +LG T       S P  IR    I   RN  HGSD
Sbjct: 62  TSFMNSGPSYALILQSETCIQKWRSLLGPTKVFRAVYSDPNCIRALYGISDTRNACHGSD 121

Query: 436 SVESAKKXIGLWFTD 480
           S  SA + I + F +
Sbjct: 122 SEASALREISILFPE 136


>AY069763-1|AAL39908.1|  387|Drosophila melanogaster RE01365p
           protein.
          Length = 387

 Score = 33.5 bits (73), Expect = 0.18
 Identities = 28/126 (22%), Positives = 53/126 (42%), Gaps = 8/126 (6%)
 Frame = +1

Query: 82  RERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLAS-RPFFP 258
           +  T  ++KP  ++ GL+G II      GF+L  ++ +  +    ++ Y       P + 
Sbjct: 245 KNTTLAIIKPHSIKDGLLGDIISEILSNGFRLTAMRMILMARINCEEFYEVYRGVVPEYI 304

Query: 259 GLVKYMSSGPVVPMVWEGLN-VVKTGRQMLGATNPTDSQ------PGTIRGDLCIQVGRN 417
            +V  ++SG  + M     +   KT R+      P D +      P T+R        +N
Sbjct: 305 PMVAQLASGVCMCMEIACADPEKKTDREFRNFCGPMDPEIAKLLRPHTLRAKFGKSKVQN 364

Query: 418 IIHGSD 435
            +H +D
Sbjct: 365 AVHCTD 370


>AF202050-1|AAF20908.1|  244|Drosophila melanogaster nmdyn-D7
           protein.
          Length = 244

 Score = 33.5 bits (73), Expect = 0.18
 Identities = 28/126 (22%), Positives = 53/126 (42%), Gaps = 8/126 (6%)
 Frame = +1

Query: 82  RERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLAS-RPFFP 258
           +  T  ++KP  ++ GL+G II      GF+L  ++ +  +    ++ Y       P + 
Sbjct: 102 KNTTLAIIKPHSIKDGLLGDIISEILSNGFRLTAMRMILMARINCEEFYEVYRGVVPEYI 161

Query: 259 GLVKYMSSGPVVPMVWEGLN-VVKTGRQMLGATNPTDSQ------PGTIRGDLCIQVGRN 417
            +V  ++SG  + M     +   KT R+      P D +      P T+R        +N
Sbjct: 162 PMVAQLASGVCMCMEIACADPEKKTDREFRNFCGPMDPEIAKLLRPHTLRAKFGKSKVQN 221

Query: 418 IIHGSD 435
            +H +D
Sbjct: 222 AVHCTD 227


>AE014297-999|AAF54425.1|  387|Drosophila melanogaster CG8362-PA
           protein.
          Length = 387

 Score = 33.5 bits (73), Expect = 0.18
 Identities = 28/126 (22%), Positives = 53/126 (42%), Gaps = 8/126 (6%)
 Frame = +1

Query: 82  RERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLAS-RPFFP 258
           +  T  ++KP  ++ GL+G II      GF+L  ++ +  +    ++ Y       P + 
Sbjct: 245 KNTTLAIIKPHSIKDGLLGDIISEILSNGFRLTAMRMILMARINCEEFYEVYRGVVPEYI 304

Query: 259 GLVKYMSSGPVVPMVWEGLN-VVKTGRQMLGATNPTDSQ------PGTIRGDLCIQVGRN 417
            +V  ++SG  + M     +   KT R+      P D +      P T+R        +N
Sbjct: 305 PMVAQLASGVCMCMEIACADPEKKTDREFRNFCGPMDPEIAKLLRPHTLRAKFGKSKVQN 364

Query: 418 IIHGSD 435
            +H +D
Sbjct: 365 AVHCTD 370


>X85331-1|CAA59680.1|  437|Drosophila melanogaster msh protein.
          Length = 437

 Score = 33.1 bits (72), Expect = 0.24
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -2

Query: 218 WRSSSDGHTNFKPTSLKPFFSKRSIMVPTRPRCTPS 111
           WRS+S  H   K TS    FS  S++  TRPR  P+
Sbjct: 41  WRSASAAHHLHKTTSRLSNFSVASLLADTRPRTPPN 76


>AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA
           protein.
          Length = 2284

 Score = 32.3 bits (70), Expect = 0.41
 Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 5/93 (5%)
 Frame = -2

Query: 377 PGCESVGLVAPSI*RPVFTTLRPSHTIGTTGPELMYFTRPGKKGRDAKSL*CCWRSSSDG 198
           P C+    V  +  RP  TT RP    G+T PE    TRP       +    C + S+D 
Sbjct: 474 PECQPATYVPQTTRRPSITTKRPRCYPGSTDPECQPRTRPTITTSQPR----CSQGSTDP 529

Query: 197 H----TNFKPTSLK-PFFSKRSIMVPTRPRCTP 114
                T   PT+ + P  + R  +  ++P C P
Sbjct: 530 ECQPATYLPPTTRRTPIPTTRVPLTTSKPNCYP 562



 Score = 29.1 bits (62), Expect = 3.9
 Identities = 25/88 (28%), Positives = 37/88 (42%)
 Frame = -2

Query: 377  PGCESVGLVAPSI*RPVFTTLRPSHTIGTTGPELMYFTRPGKKGRDAKSL*CCWRSSSDG 198
            P C+      P+   PV TT +P+   G+T           +K R       C+  S D 
Sbjct: 1642 PECQPATYAPPTTRTPV-TTSKPNCYPGSTDKRCPQEIVTTQKPR-------CYPGSPDP 1693

Query: 197  HTNFKPTSLKPFFSKRSIMVPTRPRCTP 114
                +P +  P  + R+ + PTRPRC P
Sbjct: 1694 EC--QPATYLPPTTSRTTIPPTRPRCYP 1719



 Score = 28.7 bits (61), Expect = 5.1
 Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 2/90 (2%)
 Frame = -2

Query: 377  PGCESVGLVAPSI*RPVFTTLRPSHTIGTTGPELM--YFTRPGKKGRDAKSL*CCWRSSS 204
            P C+    + P+   P   T +P    G+T        ++ P  +     S   C+  S 
Sbjct: 1377 PECQPATYLPPTTVSPTIPTTKPRCYPGSTDTSCQPKTYSPPTSRPLITTSKPRCYPGSP 1436

Query: 203  DGHTNFKPTSLKPFFSKRSIMVPTRPRCTP 114
            D     +P +  P  ++R+ +  T+PRC P
Sbjct: 1437 DPEC--QPATYLPPTTRRTTIPVTKPRCYP 1464



 Score = 27.9 bits (59), Expect = 8.9
 Identities = 23/91 (25%), Positives = 35/91 (38%), Gaps = 2/91 (2%)
 Frame = -2

Query: 377  PGCESVGLVAPSI*RPVFTTLRPSHTIGTTGPELM--YFTRPGKKGRDAKSL*CCWRSSS 204
            P C+    + P+  R    T+RP    G+  P+     +T P  K         C+  SS
Sbjct: 2013 PECQPATYLPPTTARTTIPTVRPRCYPGSNDPDCQPSTYTPPVTKTPITTPKPRCYPGSS 2072

Query: 203  DGHTNFKPTSLKPFFSKRSIMVPTRPRCTPS 111
            D       T L P  + R     + P+C P+
Sbjct: 2073 DPSCQ-PATYLPPTTASRCYPGSSDPKCQPA 2102


>BT003254-1|AAO25011.1| 1074|Drosophila melanogaster LD25748p protein.
          Length = 1074

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = -3

Query: 274  CTLLDQGRKAGMPNRCSVAGEVLLMAIRISNRLV*SLSF 158
            CT L QG      N C VA      A R++N  +  LSF
Sbjct: 921  CTSLHQGLSFLTKNHCDVASVEFSKAYRLTNTTIEPLSF 959


>AE014298-958|AAN09188.1| 1074|Drosophila melanogaster CG4532-PE,
            isoform E protein.
          Length = 1074

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = -3

Query: 274  CTLLDQGRKAGMPNRCSVAGEVLLMAIRISNRLV*SLSF 158
            CT L QG      N C VA      A R++N  +  LSF
Sbjct: 921  CTSLHQGLSFLTKNHCDVASVEFSKAYRLTNTTIEPLSF 959


>AE014298-957|AAF46202.1| 1074|Drosophila melanogaster CG4532-PD,
            isoform D protein.
          Length = 1074

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = -3

Query: 274  CTLLDQGRKAGMPNRCSVAGEVLLMAIRISNRLV*SLSF 158
            CT L QG      N C VA      A R++N  +  LSF
Sbjct: 921  CTSLHQGLSFLTKNHCDVASVEFSKAYRLTNTTIEPLSF 959


>AE014298-956|AAN09187.1| 1074|Drosophila melanogaster CG4532-PC,
            isoform C protein.
          Length = 1074

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = -3

Query: 274  CTLLDQGRKAGMPNRCSVAGEVLLMAIRISNRLV*SLSF 158
            CT L QG      N C VA      A R++N  +  LSF
Sbjct: 921  CTSLHQGLSFLTKNHCDVASVEFSKAYRLTNTTIEPLSF 959


>AE014298-955|AAN09186.1| 1074|Drosophila melanogaster CG4532-PB,
            isoform B protein.
          Length = 1074

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = -3

Query: 274  CTLLDQGRKAGMPNRCSVAGEVLLMAIRISNRLV*SLSF 158
            CT L QG      N C VA      A R++N  +  LSF
Sbjct: 921  CTSLHQGLSFLTKNHCDVASVEFSKAYRLTNTTIEPLSF 959


>AE014298-954|AAN09185.1| 1074|Drosophila melanogaster CG4532-PA,
            isoform A protein.
          Length = 1074

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = -3

Query: 274  CTLLDQGRKAGMPNRCSVAGEVLLMAIRISNRLV*SLSF 158
            CT L QG      N C VA      A R++N  +  LSF
Sbjct: 921  CTSLHQGLSFLTKNHCDVASVEFSKAYRLTNTTIEPLSF 959


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,514,591
Number of Sequences: 53049
Number of extensions: 466221
Number of successful extensions: 1004
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 995
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1949978112
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)