Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_F13
         (525 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical p...   194   3e-50
AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical ...    66   1e-11
AC025721-13|AAR85897.1|  139|Caenorhabditis elegans Hypothetical...    42   3e-04
U29382-6|AAF99998.1|  379|Caenorhabditis elegans Hypothetical pr...    27   6.2  
L14710-6|AAA28079.1|  227|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr...    27   8.2  

>Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical
           protein F25H2.5 protein.
          Length = 153

 Score =  194 bits (473), Expect = 3e-50
 Identities = 91/148 (61%), Positives = 111/148 (75%), Gaps = 1/148 (0%)
 Frame = +1

Query: 85  ERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPGL 264
           ERTFI +KPDGV RGLVG II RFE++G+KLV LK +  S+  L+ HY DL  +PFFP L
Sbjct: 5   ERTFIAIKPDGVHRGLVGKIIARFEERGYKLVALKQMTASKAHLEVHYQDLKDKPFFPSL 64

Query: 265 VKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPTDSQPGTIRGDLCIQVGRNIIHGSDSVE 444
           ++YMSSGPVV MVW+GL+VVK GR MLGATNP  S PGTIRGD CIQ GRNI HGSD+V+
Sbjct: 65  IEYMSSGPVVAMVWQGLDVVKQGRSMLGATNPLASAPGTIRGDFCIQTGRNICHGSDAVD 124

Query: 445 SAKKXIGLWFTDKEVVGW-TPANENXVY 525
           SA + I  WF  +E+  + +P   + VY
Sbjct: 125 SANREIAHWFKQEEINDYASPFINSWVY 152


>AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical
           protein F55A3.6 protein.
          Length = 118

 Score = 66.1 bits (154), Expect = 1e-11
 Identities = 36/79 (45%), Positives = 47/79 (59%)
 Frame = +1

Query: 244 RPFFPGLVKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPTDSQPGTIRGDLCIQVGRNII 423
           +PFFP L+ YMSSGPVV M+WEG +VVK  R +LG       +  +I  DL ++      
Sbjct: 33  KPFFPLLIDYMSSGPVVAMLWEGCDVVKRARVILGEELEV-GEFRSIFYDLVVRDTHKGC 91

Query: 424 HGSDSVESAKKXIGLWFTD 480
           H SDSV SA +   LWF +
Sbjct: 92  HCSDSVASANREYVLWFEE 110


>AC025721-13|AAR85897.1|  139|Caenorhabditis elegans Hypothetical
           protein Y48G8AL.15 protein.
          Length = 139

 Score = 41.9 bits (94), Expect = 3e-04
 Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 1/126 (0%)
 Frame = +1

Query: 97  IMVKPDGV-QRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPGLVKY 273
           +++KP+ V  R L    +      G ++  ++ +  S  L +Q Y+    + F+  LV++
Sbjct: 14  VVLKPEIVAHRVLAQVALSELRSNGIEIEEMRQMKISGSLAKQLYAQHQGKFFYDRLVRH 73

Query: 274 MSSGPVVPMVWEGLNVVKTGRQMLGATNPTDSQPGTIRGDLCIQVGRNIIHGSDSVESAK 453
           +SSGPV+ M   G      G   L        QP  IR    +   RN+ H SD  ++A+
Sbjct: 74  ISSGPVIAMRVSGNARKCIGSSRLWPRLEPTVQP--IRQRFALSDVRNVAHASDE-DAAE 130

Query: 454 KXIGLW 471
           K + L+
Sbjct: 131 KELQLF 136


>U29382-6|AAF99998.1|  379|Caenorhabditis elegans Hypothetical
           protein R03H10.1 protein.
          Length = 379

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +1

Query: 211 LLQQHYSDLASRPFFPGLVKYMSSGPVVPMVW 306
           LL + + ++ S   +PG V+++   P++P  W
Sbjct: 144 LLDRCWKNVDSMELYPGTVQFLDKLPIIPSNW 175


>L14710-6|AAA28079.1|  227|Caenorhabditis elegans Hypothetical
           protein K02D10.4 protein.
          Length = 227

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 132 CGHHY*TFRKERLQTSRFEIRMAIRRTSP 218
           CGH        R +T +FE R+ ++R+SP
Sbjct: 107 CGHPVEVDDHHRRETKKFENRLTLKRSSP 135


>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical protein
            F12F6.6 protein.
          Length = 1126

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
 Frame = +1

Query: 238  ASRPFFPGLVKYMSSGPVVPMVWEGLNVVKTGRQML---GATNPTDSQPGTI 384
            AS  F      Y+    V+  VW G    +T  Q +   GATN  D++ GTI
Sbjct: 1003 ASSEFLENSKAYIIDNGVILFVWVGSACPQTWVQDVFGVGATNQIDTESGTI 1054


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,846,588
Number of Sequences: 27780
Number of extensions: 235603
Number of successful extensions: 673
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 672
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1028310386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)