Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_F02
(533 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68315-8|CAA92674.1| 142|Caenorhabditis elegans Hypothetical pr... 127 4e-30
Z68315-10|CAD59149.1| 109|Caenorhabditis elegans Hypothetical p... 95 3e-20
Z68315-9|CAA92678.1| 106|Caenorhabditis elegans Hypothetical pr... 95 3e-20
Z81075-7|CAI79229.1| 342|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z81075-3|CAI79228.1| 192|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z81075-2|CAB03048.1| 368|Caenorhabditis elegans Hypothetical pr... 28 4.8
AL032645-3|CAI79264.1| 342|Caenorhabditis elegans Hypothetical ... 28 4.8
AL031637-1|CAA21047.2| 317|Caenorhabditis elegans Hypothetical ... 28 4.8
U41028-4|AAA82357.1| 455|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical pr... 27 8.5
>Z68315-8|CAA92674.1| 142|Caenorhabditis elegans Hypothetical
protein F28C6.7a protein.
Length = 142
Score = 127 bits (307), Expect = 4e-30
Identities = 57/105 (54%), Positives = 82/105 (78%)
Frame = +2
Query: 149 PXSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 328
P +KELR K ++++PIR DDEV V+RG +KG G+V++ YRKKFV++I++I REKANG
Sbjct: 33 PLTKELRTKHGIRAIPIRTDDEVVVMRGRHKGN-TGRVLRCYRKKFVIHIDKITREKANG 91
Query: 329 ATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 463
+T ++GIHPSK I KLK++KDR+A+++R+A GR G KGK+
Sbjct: 92 STVHIGIHPSKVAITKLKLDKDRRALVERKAAGRSRVTGILKGKH 136
Score = 44.8 bits (101), Expect = 4e-05
Identities = 22/41 (53%), Positives = 28/41 (68%)
Frame = +1
Query: 52 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLX*GTKTK 174
MK N V+S K+RK HF+APSH RR +MS+PL +TK
Sbjct: 1 MKVNPFVSSDSGKSRKAHFNAPSHERRRIMSAPLTKELRTK 41
>Z68315-10|CAD59149.1| 109|Caenorhabditis elegans Hypothetical
protein F28C6.7c protein.
Length = 109
Score = 95.1 bits (226), Expect = 3e-20
Identities = 41/71 (57%), Positives = 58/71 (81%)
Frame = +2
Query: 149 PXSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 328
P +KELR K ++++PIR DDEV V+RG +KG G+V++ YRKKFV++I++I REKANG
Sbjct: 33 PLTKELRTKHGIRAIPIRTDDEVVVMRGRHKGN-TGRVLRCYRKKFVIHIDKITREKANG 91
Query: 329 ATAYVGIHPSK 361
+T ++GIHPSK
Sbjct: 92 STVHIGIHPSK 102
Score = 44.8 bits (101), Expect = 4e-05
Identities = 22/41 (53%), Positives = 28/41 (68%)
Frame = +1
Query: 52 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLX*GTKTK 174
MK N V+S K+RK HF+APSH RR +MS+PL +TK
Sbjct: 1 MKVNPFVSSDSGKSRKAHFNAPSHERRRIMSAPLTKELRTK 41
>Z68315-9|CAA92678.1| 106|Caenorhabditis elegans Hypothetical
protein F28C6.7b protein.
Length = 106
Score = 95.1 bits (226), Expect = 3e-20
Identities = 41/71 (57%), Positives = 58/71 (81%)
Frame = +2
Query: 149 PXSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 328
P +KELR K ++++PIR DDEV V+RG +KG G+V++ YRKKFV++I++I REKANG
Sbjct: 33 PLTKELRTKHGIRAIPIRTDDEVVVMRGRHKGN-TGRVLRCYRKKFVIHIDKITREKANG 91
Query: 329 ATAYVGIHPSK 361
+T ++GIHPSK
Sbjct: 92 STVHIGIHPSK 102
Score = 44.8 bits (101), Expect = 4e-05
Identities = 22/41 (53%), Positives = 28/41 (68%)
Frame = +1
Query: 52 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLX*GTKTK 174
MK N V+S K+RK HF+APSH RR +MS+PL +TK
Sbjct: 1 MKVNPFVSSDSGKSRKAHFNAPSHERRRIMSAPLTKELRTK 41
>Z81075-7|CAI79229.1| 342|Caenorhabditis elegans Hypothetical
protein F35C12.3c protein.
Length = 342
Score = 27.9 bits (59), Expect = 4.8
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 323 WPFLFESSQCIQQTFYDTPASLC 255
W +F ++CI TF + P SLC
Sbjct: 217 WRCMFAQNKCIGTTFQNIPISLC 239
>Z81075-3|CAI79228.1| 192|Caenorhabditis elegans Hypothetical
protein F35C12.3b protein.
Length = 192
Score = 27.9 bits (59), Expect = 4.8
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 323 WPFLFESSQCIQQTFYDTPASLC 255
W +F ++CI TF + P SLC
Sbjct: 67 WRCMFAQNKCIGTTFQNIPISLC 89
>Z81075-2|CAB03048.1| 368|Caenorhabditis elegans Hypothetical
protein F35C12.3a protein.
Length = 368
Score = 27.9 bits (59), Expect = 4.8
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 323 WPFLFESSQCIQQTFYDTPASLC 255
W +F ++CI TF + P SLC
Sbjct: 243 WRCMFAQNKCIGTTFQNIPISLC 265
>AL032645-3|CAI79264.1| 342|Caenorhabditis elegans Hypothetical
protein F35C12.3c protein.
Length = 342
Score = 27.9 bits (59), Expect = 4.8
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 323 WPFLFESSQCIQQTFYDTPASLC 255
W +F ++CI TF + P SLC
Sbjct: 217 WRCMFAQNKCIGTTFQNIPISLC 239
>AL031637-1|CAA21047.2| 317|Caenorhabditis elegans Hypothetical
protein Y47H9B.2 protein.
Length = 317
Score = 27.9 bits (59), Expect = 4.8
Identities = 7/24 (29%), Positives = 15/24 (62%)
Frame = -1
Query: 497 KRPPWLWQFPRCIYPCLCQVQPVC 426
++ PW ++ +YP LC++ +C
Sbjct: 249 RKYPWYYKMSSAMYPALCELAGIC 272
>U41028-4|AAA82357.1| 455|Caenorhabditis elegans Hypothetical
protein C25G6.5 protein.
Length = 455
Score = 27.5 bits (58), Expect = 6.4
Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Frame = -2
Query: 331 CTIGLFSLN--PLNVYNKLFTIHLHHFANLLAFVVS------TYNLNFIVFAN-RHGFYI 179
C + +F++ PLNV++ T L + ++ F + + LN +++A H F I
Sbjct: 275 CVVAVFAVAWLPLNVFHIFNTFELVNSFSVTTFSICHCLAMCSACLNPLIYAFFNHNFRI 334
Query: 178 EFLS*FLRXGERTSTLALYVKEH*NASSCFSFLRKSPAC*T 56
EF+ F R G R+ + ++ ++ S + R C T
Sbjct: 335 EFMHLFDRVGLRSLRVVIFGEQESLKKSMRTEFRSRGGCKT 375
>Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical protein
F22G12.5 protein.
Length = 2396
Score = 27.1 bits (57), Expect = 8.5
Identities = 13/52 (25%), Positives = 23/52 (44%)
Frame = -3
Query: 174 FCLSSLXQGRGHQHSPYM*RSTEMPLPVFPS*GSHLLVELHSVALRQNDTAK 19
+C+SS + HQ +P + LP+ + HLL +++ N K
Sbjct: 873 YCISSTCAVQHHQQNPVFGEEMKAQLPLNLTTSDHLLFSFSHISVAGNSNLK 924
>Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical protein
F22G12.5 protein.
Length = 2396
Score = 27.1 bits (57), Expect = 8.5
Identities = 13/52 (25%), Positives = 23/52 (44%)
Frame = -3
Query: 174 FCLSSLXQGRGHQHSPYM*RSTEMPLPVFPS*GSHLLVELHSVALRQNDTAK 19
+C+SS + HQ +P + LP+ + HLL +++ N K
Sbjct: 873 YCISSTCAVQHHQQNPVFGEEMKAQLPLNLTTSDHLLFSFSHISVAGNSNLK 924
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,999,542
Number of Sequences: 27780
Number of extensions: 263866
Number of successful extensions: 726
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 723
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -