Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_F01
         (666 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI000051AC42 Cluster: PREDICTED: similar to CG3709-PA;...    44   0.004
UniRef50_A7T450 Cluster: Predicted protein; n=1; Nematostella ve...    40   0.071
UniRef50_Q55G71 Cluster: Putative uncharacterized protein; n=1; ...    39   0.094
UniRef50_UPI0000D5739A Cluster: PREDICTED: similar to CG3709-PA;...    36   0.88 
UniRef50_Q8I265 Cluster: Serine/threonine protein kinase, putati...    35   1.5  
UniRef50_A7Q3M8 Cluster: Chromosome chr13 scaffold_48, whole gen...    34   2.7  
UniRef50_Q3M122 Cluster: Helicase-like; n=2; Cyanobacteria|Rep: ...    33   4.7  
UniRef50_Q7PV53 Cluster: ENSANGP00000013805; n=2; Culicidae|Rep:...    33   6.2  
UniRef50_Q5CT36 Cluster: Narf-like protein nuclear prelamin A re...    33   6.2  
UniRef50_Q07GA4 Cluster: Novel protein; n=2; Xenopus tropicalis|...    33   8.2  

>UniRef50_UPI000051AC42 Cluster: PREDICTED: similar to CG3709-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to CG3709-PA
           - Apis mellifera
          Length = 440

 Score = 43.6 bits (98), Expect = 0.004
 Identities = 17/48 (35%), Positives = 30/48 (62%)
 Frame = +1

Query: 481 VSCLGILQEENWSECFNMVKETLEKKRYECSTFACALSAPIATLLRDK 624
           ++CLGILQ +   +    ++  ++K+ Y+  TF CAL+ PI   LR++
Sbjct: 1   MACLGILQNKIQEQVITKIQAEIKKQNYDSGTFTCALTIPICISLRER 48


>UniRef50_A7T450 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 238

 Score = 39.5 bits (88), Expect = 0.071
 Identities = 17/47 (36%), Positives = 28/47 (59%)
 Frame = +1

Query: 472 SICVSCLGILQEENWSECFNMVKETLEKKRYECSTFACALSAPIATL 612
           +IC  CLGILQ    +   N + +T++   YE  +F  A+S P++T+
Sbjct: 81  TICKGCLGILQNGCDTPTVNKIVDTVQSSGYEFESFTFAISIPLSTM 127


>UniRef50_Q55G71 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 640

 Score = 39.1 bits (87), Expect = 0.094
 Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
 Frame = +1

Query: 475 ICVSCLGILQEENWSECF-NMVKETLEKKRYECSTFACALSAPIATLLRDK 624
           +C  CLGILQ+ N  E F +     ++   YE   ++ ALS P +TL+R++
Sbjct: 214 VCCCCLGILQDTNNKELFLDEFIVKMKNSGYEFQNYSLALSMPTSTLIREQ 264


>UniRef50_UPI0000D5739A Cluster: PREDICTED: similar to CG3709-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG3709-PA - Tribolium castaneum
          Length = 472

 Score = 35.9 bits (79), Expect = 0.88
 Identities = 21/68 (30%), Positives = 32/68 (47%)
 Frame = +1

Query: 418 NKDVNGCDDEXXXXXXXISICVSCLGILQEENWSECFNMVKETLEKKRYECSTFACALSA 597
           N   NG D         ++ C+ CL +LQ+    E     +E    K Y+C TF   +S 
Sbjct: 36  NPQQNGHDQ--LAKKTKLNSCIICLDLLQDVTL-ESMVQCEELEGVKEYDCKTFINFISF 92

Query: 598 PIATLLRD 621
           P+A L+R+
Sbjct: 93  PVAVLIRE 100


>UniRef50_Q8I265 Cluster: Serine/threonine protein kinase, putative;
           n=4; Plasmodium|Rep: Serine/threonine protein kinase,
           putative - Plasmodium falciparum (isolate 3D7)
          Length = 1534

 Score = 35.1 bits (77), Expect = 1.5
 Identities = 21/67 (31%), Positives = 31/67 (46%)
 Frame = -3

Query: 277 RRQHISQHPTSLQNLTMALLSIFLLFYTANKHVTKYSKQMNITFQFFL*FSFKYKNSAVT 98
           ++ H + H + L N+   L ++ L     NKH+ KY K+    F FF      YK S +T
Sbjct: 814 KKIHRNIHKSKLSNMYAHLSNLDLFLCYRNKHIYKYIKKRQALFNFFF-----YKRSYIT 868

Query: 97  KEENNST 77
             E   T
Sbjct: 869 HYEKYFT 875


>UniRef50_A7Q3M8 Cluster: Chromosome chr13 scaffold_48, whole genome
           shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
           chr13 scaffold_48, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 612

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +3

Query: 144 WKVIFICLLYFVTCLLAV*NKRKMDNKAIVKFCKEV 251
           W+V F  LL     + A  N+RK+D   I+K C+E+
Sbjct: 18  WRVAFYLLLLMAATMHAKMNRRKLDKLNIIKICEEI 53


>UniRef50_Q3M122 Cluster: Helicase-like; n=2; Cyanobacteria|Rep:
           Helicase-like - Anabaena variabilis (strain ATCC 29413 /
           PCC 7937)
          Length = 1223

 Score = 33.5 bits (73), Expect = 4.7
 Identities = 30/90 (33%), Positives = 47/90 (52%)
 Frame = -3

Query: 277 RRQHISQHPTSLQNLTMALLSIFLLFYTANKHVTKYSKQMNITFQFFL*FSFKYKNSAVT 98
           RR   ++ P S+QN     L   ++   +N +    ++ +NIT++ F+  SFKY NSA  
Sbjct: 684 RRASENESPLSVQNFKFKGLGATVI--NSNSYP---ARSLNITYKVFI-ESFKYSNSAFL 737

Query: 97  KEENNSTVCCMNLNSVYIQILLVYFSFVEN 8
            E+NNS V     N V  +I     SF++N
Sbjct: 738 -EKNNSLV-----NRVQAEIAEDINSFLDN 761


>UniRef50_Q7PV53 Cluster: ENSANGP00000013805; n=2; Culicidae|Rep:
           ENSANGP00000013805 - Anopheles gambiae str. PEST
          Length = 505

 Score = 33.1 bits (72), Expect = 6.2
 Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
 Frame = +1

Query: 391 SNPVDNINGNKDVNGCDDEXXXXXXXISICVSCLGILQEENWSECFNMVKETLEKKRYEC 570
           S P + I   +  +  + E        ++C++CLG+   +  +     VKE    K+Y C
Sbjct: 47  SFPAERIRDLEPADQENGEHKAKKLKENVCIACLGLFDLDRIATLACEVKEHAAYKQYRC 106

Query: 571 ST-FACALSAPIATLLR 618
              F  ++S PI   LR
Sbjct: 107 EAGFLTSISLPIVLHLR 123


>UniRef50_Q5CT36 Cluster: Narf-like protein nuclear prelamin A
           recognition factor; n=3; Cryptosporidium|Rep: Narf-like
           protein nuclear prelamin A recognition factor -
           Cryptosporidium parvum Iowa II
          Length = 560

 Score = 33.1 bits (72), Expect = 6.2
 Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 11/79 (13%)
 Frame = +1

Query: 415 GNKD--VNGCDDEXXXXXXXISICVSCLG-----ILQEENWSECFNMVKE----TLEKKR 561
           GNKD   +G  D+          C  C+      +L+++N SE  N++K+     +    
Sbjct: 46  GNKDDKKSGTSDKATVNVADCLACSGCVTSAEAKLLEDQNVSEFMNILKQKRLTVVSISN 105

Query: 562 YECSTFACALSAPIATLLR 618
             CS+FAC L+  + T+ R
Sbjct: 106 QSCSSFACHLNCDLITIQR 124


>UniRef50_Q07GA4 Cluster: Novel protein; n=2; Xenopus
           tropicalis|Rep: Novel protein - Xenopus tropicalis
           (Western clawed frog) (Silurana tropicalis)
          Length = 165

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 23/78 (29%), Positives = 35/78 (44%)
 Frame = +1

Query: 388 TSNPVDNINGNKDVNGCDDEXXXXXXXISICVSCLGILQEENWSECFNMVKETLEKKRYE 567
           TSN  +++  ++DVNG           + IC  CLGILQ+    E    V   +    YE
Sbjct: 75  TSN--EHVGNSEDVNGSQ--------VVGICTLCLGILQQFCEPEFIKKVFVKINSAGYE 124

Query: 568 CSTFACALSAPIATLLRD 621
              F  ++S P    +R+
Sbjct: 125 LKDFVFSVSLPAQLSVRE 142


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 504,575,461
Number of Sequences: 1657284
Number of extensions: 8683817
Number of successful extensions: 20073
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 19463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20066
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50826451017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)