Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_E24
         (654 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0035 - 20375009-20375080,20375290-20375379,20376582-203766...    81   8e-16
02_05_1007 + 33452774-33452993,33453028-33453122,33453208-334533...    29   2.4  

>09_06_0035 -
           20375009-20375080,20375290-20375379,20376582-20376684,
           20376784-20376864,20376966-20377192
          Length = 190

 Score = 81.0 bits (191), Expect = 8e-16
 Identities = 38/100 (38%), Positives = 61/100 (61%)
 Frame = +1

Query: 253 FNLRXQSVLNQKIQSLVTGLQEIDKLKSQVHDIHVPTEVFDYIDQGRNPQLYTKDCIDKA 432
           F+   Q  L Q++ SLV  L  + K  ++  +I VP EV + ID G+NP  +T+D ++  
Sbjct: 64  FSSASQLPLLQRLNSLVAELDTMQK-HAEGCNIQVPMEVVNLIDDGKNPDEFTRDVLNSC 122

Query: 433 LAKNEEVKGKIDSYKRFKTHLLSELSKTFPNEITKYKALR 552
           +AKN+  KGK D++K  + HLL EL + FP ++  Y+ +R
Sbjct: 123 IAKNQVTKGKTDAFKSLRKHLLEELEQAFPEDVEAYREIR 162


>02_05_1007 +
           33452774-33452993,33453028-33453122,33453208-33453329,
           33453392-33453694,33454657-33454918,33455039-33455140,
           33455931-33457151,33457250-33457342
          Length = 805

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +1

Query: 475 KRFKTHLLSELSKTFPNEITKYKALRGGE 561
           KRFK  + S +SKT P+  T Y   +GG+
Sbjct: 160 KRFKAEISSSISKTAPDFSTVYVVSKGGK 188


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,938,606
Number of Sequences: 37544
Number of extensions: 223197
Number of successful extensions: 516
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 516
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)