Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_E24
(654 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC003353-1|AAH03353.1| 135|Homo sapiens mediator of RNA polymer... 145 1e-34
AY598325-1|AAT06736.1| 135|Homo sapiens L6 protein. 145 1e-34
AY453397-1|AAS47514.1| 135|Homo sapiens transformation-related ... 145 1e-34
AY277599-1|AAQ18038.1| 135|Homo sapiens transformation-related ... 145 1e-34
EF068222-1|ABK64187.1| 2358|Homo sapiens jumonji domain-containi... 32 2.1
BX537954-1|CAD97921.1| 2210|Homo sapiens hypothetical protein pr... 32 2.1
AL713895-3|CAI10950.1| 759|Homo sapiens novel protein protein. 32 2.1
AL607128-2|CAI14188.1| 759|Homo sapiens novel protein protein. 32 2.1
AK027280-1|BAB55015.1| 427|Homo sapiens protein ( Homo sapiens ... 32 2.1
>BC003353-1|AAH03353.1| 135|Homo sapiens mediator of RNA polymerase
II transcription, subunit 10 homolog (NUT2, S. cerev
protein.
Length = 135
Score = 145 bits (351), Expect = 1e-34
Identities = 63/101 (62%), Positives = 84/101 (83%)
Frame = +1
Query: 253 FNLRXQSVLNQKIQSLVTGLQEIDKLKSQVHDIHVPTEVFDYIDQGRNPQLYTKDCIDKA 432
F Q+ LNQK+ +VTGLQ+IDK + Q+HDI VP EVF+YIDQGRNPQLYTK+C+++A
Sbjct: 29 FQPSSQAGLNQKLNFIVTGLQDIDKCRQQLHDITVPLEVFEYIDQGRNPQLYTKECLERA 88
Query: 433 LAKNEEVKGKIDSYKRFKTHLLSELSKTFPNEITKYKALRG 555
LAKNE+VKGKID+ K+FK+ L+ ELSK FP ++ KY+++RG
Sbjct: 89 LAKNEQVKGKIDTMKKFKSLLIQELSKVFPEDMAKYRSIRG 129
Score = 41.9 bits (94), Expect = 0.002
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +3
Query: 168 MSSPLXNLETQLEMFIENVRQIRIIVSDFQP 260
M+ +LE LE F+EN+RQ+ IIVSDFQP
Sbjct: 1 MAEKFDHLEEHLEKFVENIRQLGIIVSDFQP 31
>AY598325-1|AAT06736.1| 135|Homo sapiens L6 protein.
Length = 135
Score = 145 bits (351), Expect = 1e-34
Identities = 63/101 (62%), Positives = 84/101 (83%)
Frame = +1
Query: 253 FNLRXQSVLNQKIQSLVTGLQEIDKLKSQVHDIHVPTEVFDYIDQGRNPQLYTKDCIDKA 432
F Q+ LNQK+ +VTGLQ+IDK + Q+HDI VP EVF+YIDQGRNPQLYTK+C+++A
Sbjct: 29 FQPSSQAGLNQKLNFIVTGLQDIDKCRQQLHDITVPLEVFEYIDQGRNPQLYTKECLERA 88
Query: 433 LAKNEEVKGKIDSYKRFKTHLLSELSKTFPNEITKYKALRG 555
LAKNE+VKGKID+ K+FK+ L+ ELSK FP ++ KY+++RG
Sbjct: 89 LAKNEQVKGKIDTMKKFKSLLIQELSKVFPEDMAKYRSIRG 129
Score = 41.9 bits (94), Expect = 0.002
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +3
Query: 168 MSSPLXNLETQLEMFIENVRQIRIIVSDFQP 260
M+ +LE LE F+EN+RQ+ IIVSDFQP
Sbjct: 1 MAEKFDHLEEHLEKFVENIRQLGIIVSDFQP 31
>AY453397-1|AAS47514.1| 135|Homo sapiens transformation-related
protein 20 protein.
Length = 135
Score = 145 bits (351), Expect = 1e-34
Identities = 63/101 (62%), Positives = 84/101 (83%)
Frame = +1
Query: 253 FNLRXQSVLNQKIQSLVTGLQEIDKLKSQVHDIHVPTEVFDYIDQGRNPQLYTKDCIDKA 432
F Q+ LNQK+ +VTGLQ+IDK + Q+HDI VP EVF+YIDQGRNPQLYTK+C+++A
Sbjct: 29 FQPSSQAGLNQKLNFIVTGLQDIDKCRQQLHDITVPLEVFEYIDQGRNPQLYTKECLERA 88
Query: 433 LAKNEEVKGKIDSYKRFKTHLLSELSKTFPNEITKYKALRG 555
LAKNE+VKGKID+ K+FK+ L+ ELSK FP ++ KY+++RG
Sbjct: 89 LAKNEQVKGKIDTMKKFKSLLIQELSKVFPEDMAKYRSIRG 129
Score = 41.9 bits (94), Expect = 0.002
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +3
Query: 168 MSSPLXNLETQLEMFIENVRQIRIIVSDFQP 260
M+ +LE LE F+EN+RQ+ IIVSDFQP
Sbjct: 1 MAEKFDHLEEHLEKFVENIRQLGIIVSDFQP 31
>AY277599-1|AAQ18038.1| 135|Homo sapiens transformation-related
protein 17 protein.
Length = 135
Score = 145 bits (351), Expect = 1e-34
Identities = 63/101 (62%), Positives = 84/101 (83%)
Frame = +1
Query: 253 FNLRXQSVLNQKIQSLVTGLQEIDKLKSQVHDIHVPTEVFDYIDQGRNPQLYTKDCIDKA 432
F Q+ LNQK+ +VTGLQ+IDK + Q+HDI VP EVF+YIDQGRNPQLYTK+C+++A
Sbjct: 29 FQPSSQAGLNQKLNFIVTGLQDIDKCRQQLHDITVPLEVFEYIDQGRNPQLYTKECLERA 88
Query: 433 LAKNEEVKGKIDSYKRFKTHLLSELSKTFPNEITKYKALRG 555
LAKNE+VKGKID+ K+FK+ L+ ELSK FP ++ KY+++RG
Sbjct: 89 LAKNEQVKGKIDTMKKFKSLLIQELSKVFPEDMAKYRSIRG 129
Score = 41.9 bits (94), Expect = 0.002
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +3
Query: 168 MSSPLXNLETQLEMFIENVRQIRIIVSDFQP 260
M+ +LE LE F+EN+RQ+ IIVSDFQP
Sbjct: 1 MAEKFDHLEEHLEKFVENIRQLGIIVSDFQP 31
>EF068222-1|ABK64187.1| 2358|Homo sapiens jumonji domain-containing
1 C splice variant protein.
Length = 2358
Score = 31.9 bits (69), Expect = 2.1
Identities = 19/55 (34%), Positives = 33/55 (60%)
Frame = +1
Query: 364 EVFDYIDQGRNPQLYTKDCIDKALAKNEEVKGKIDSYKRFKTHLLSELSKTFPNE 528
E +DYI +G NP+ K ++K K EE + K+ + KR +T +S+ S++ +E
Sbjct: 148 EKYDYISRGENPKGKNKHLMNKR-RKPEEDEKKL-NMKRLRTDNVSDFSESSDSE 200
>BX537954-1|CAD97921.1| 2210|Homo sapiens hypothetical protein
protein.
Length = 2210
Score = 31.9 bits (69), Expect = 2.1
Identities = 19/55 (34%), Positives = 33/55 (60%)
Frame = +1
Query: 364 EVFDYIDQGRNPQLYTKDCIDKALAKNEEVKGKIDSYKRFKTHLLSELSKTFPNE 528
E +DYI +G NP+ K ++K K EE + K+ + KR +T +S+ S++ +E
Sbjct: 111 EKYDYISRGENPKGKNKHLMNKR-RKPEEDEKKL-NMKRLRTDNVSDFSESSDSE 163
>AL713895-3|CAI10950.1| 759|Homo sapiens novel protein protein.
Length = 759
Score = 31.9 bits (69), Expect = 2.1
Identities = 19/55 (34%), Positives = 33/55 (60%)
Frame = +1
Query: 364 EVFDYIDQGRNPQLYTKDCIDKALAKNEEVKGKIDSYKRFKTHLLSELSKTFPNE 528
E +DYI +G NP+ K ++K K EE + K+ + KR +T +S+ S++ +E
Sbjct: 330 EKYDYISRGENPKGKNKHLMNKR-RKPEEDEKKL-NMKRLRTDNVSDFSESSDSE 382
>AL607128-2|CAI14188.1| 759|Homo sapiens novel protein protein.
Length = 759
Score = 31.9 bits (69), Expect = 2.1
Identities = 19/55 (34%), Positives = 33/55 (60%)
Frame = +1
Query: 364 EVFDYIDQGRNPQLYTKDCIDKALAKNEEVKGKIDSYKRFKTHLLSELSKTFPNE 528
E +DYI +G NP+ K ++K K EE + K+ + KR +T +S+ S++ +E
Sbjct: 330 EKYDYISRGENPKGKNKHLMNKR-RKPEEDEKKL-NMKRLRTDNVSDFSESSDSE 382
>AK027280-1|BAB55015.1| 427|Homo sapiens protein ( Homo sapiens
cDNA FLJ14374 fis, clone HEMBA1001635, weakly similar to
TESTIS SPECIFIC PROTEIN A. ).
Length = 427
Score = 31.9 bits (69), Expect = 2.1
Identities = 19/55 (34%), Positives = 33/55 (60%)
Frame = +1
Query: 364 EVFDYIDQGRNPQLYTKDCIDKALAKNEEVKGKIDSYKRFKTHLLSELSKTFPNE 528
E +DYI +G NP+ K ++K K EE + K+ + KR +T +S+ S++ +E
Sbjct: 330 EKYDYISRGENPKGKNKHLMNKR-RKPEEDEKKL-NMKRLRTDNVSDFSESSDSE 382
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,909,794
Number of Sequences: 237096
Number of extensions: 1328994
Number of successful extensions: 2462
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2462
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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