Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_E24
         (654 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118450-1|AAM48479.1|  133|Drosophila melanogaster SD24044p pro...   153   2e-37
AY005465-1|AAF97815.1|  133|Drosophila melanogaster Nut2 protein.     153   2e-37
AE014296-2663|AAF49523.2|  131|Drosophila melanogaster CG5057-PA...   146   2e-35
AY058318-1|AAL13547.1|  872|Drosophila melanogaster GH08353p pro...    30   2.4  
AE014296-3271|AAF49077.2|  872|Drosophila melanogaster CG14183-P...    30   2.4  
AE014298-311|AAF45705.2|  917|Drosophila melanogaster CG4376-PC,...    28   9.6  

>AY118450-1|AAM48479.1|  133|Drosophila melanogaster SD24044p
           protein.
          Length = 133

 Score =  153 bits (372), Expect = 2e-37
 Identities = 73/101 (72%), Positives = 86/101 (85%), Gaps = 1/101 (0%)
 Frame = +1

Query: 253 FNLRXQSVLNQKIQSLVTGLQEIDKLKSQVHDIHVPTEVF-DYIDQGRNPQLYTKDCIDK 429
           F  + Q+VLNQKI SLVTGLQEIDKL+SQV D++VP EVF DYIDQ +NPQLYTKDC++K
Sbjct: 29  FQPQGQNVLNQKINSLVTGLQEIDKLRSQVQDVYVPFEVFFDYIDQDKNPQLYTKDCVEK 88

Query: 430 ALAKNEEVKGKIDSYKRFKTHLLSELSKTFPNEITKYKALR 552
           ALAKNEEVKGKI+  K+FKT+LL EL KTFPNE+  Y+A R
Sbjct: 89  ALAKNEEVKGKIEGLKKFKTNLLLELYKTFPNEMNNYRAYR 129



 Score = 66.9 bits (156), Expect = 2e-11
 Identities = 32/40 (80%), Positives = 33/40 (82%)
 Frame = +3

Query: 168 MSSPLXNLETQLEMFIENVRQIRIIVSDFQPQGAKCTESK 287
           MS+PL NLETQLEMFIENVRQIRIIVSDFQPQG      K
Sbjct: 1   MSAPLENLETQLEMFIENVRQIRIIVSDFQPQGQNVLNQK 40


>AY005465-1|AAF97815.1|  133|Drosophila melanogaster Nut2 protein.
          Length = 133

 Score =  153 bits (372), Expect = 2e-37
 Identities = 73/101 (72%), Positives = 86/101 (85%), Gaps = 1/101 (0%)
 Frame = +1

Query: 253 FNLRXQSVLNQKIQSLVTGLQEIDKLKSQVHDIHVPTEVF-DYIDQGRNPQLYTKDCIDK 429
           F  + Q+VLNQKI SLVTGLQEIDKL+SQV D++VP EVF DYIDQ +NPQLYTKDC++K
Sbjct: 29  FQPQGQNVLNQKINSLVTGLQEIDKLRSQVQDVYVPFEVFFDYIDQDKNPQLYTKDCVEK 88

Query: 430 ALAKNEEVKGKIDSYKRFKTHLLSELSKTFPNEITKYKALR 552
           ALAKNEEVKGKI+  K+FKT+LL EL KTFPNE+  Y+A R
Sbjct: 89  ALAKNEEVKGKIEGLKKFKTNLLLELYKTFPNEMNNYRAYR 129



 Score = 66.9 bits (156), Expect = 2e-11
 Identities = 32/40 (80%), Positives = 33/40 (82%)
 Frame = +3

Query: 168 MSSPLXNLETQLEMFIENVRQIRIIVSDFQPQGAKCTESK 287
           MS+PL NLETQLEMFIENVRQIRIIVSDFQPQG      K
Sbjct: 1   MSAPLENLETQLEMFIENVRQIRIIVSDFQPQGQNVLNQK 40


>AE014296-2663|AAF49523.2|  131|Drosophila melanogaster CG5057-PA
           protein.
          Length = 131

 Score =  146 bits (355), Expect = 2e-35
 Identities = 72/101 (71%), Positives = 85/101 (84%), Gaps = 1/101 (0%)
 Frame = +1

Query: 253 FNLRXQSVLNQKIQSLVTGLQEIDKLKSQVHDIHVPTEVF-DYIDQGRNPQLYTKDCIDK 429
           F  + Q+VLNQKI  LVTGLQEIDKL+SQV D++VP EVF DYIDQ +NPQLYTKDC++K
Sbjct: 29  FQPQGQNVLNQKI--LVTGLQEIDKLRSQVQDVYVPFEVFFDYIDQDKNPQLYTKDCVEK 86

Query: 430 ALAKNEEVKGKIDSYKRFKTHLLSELSKTFPNEITKYKALR 552
           ALAKNEEVKGKI+  K+FKT+LL EL KTFPNE+  Y+A R
Sbjct: 87  ALAKNEEVKGKIEGLKKFKTNLLLELYKTFPNEMNNYRAYR 127



 Score = 66.9 bits (156), Expect = 2e-11
 Identities = 32/40 (80%), Positives = 33/40 (82%)
 Frame = +3

Query: 168 MSSPLXNLETQLEMFIENVRQIRIIVSDFQPQGAKCTESK 287
           MS+PL NLETQLEMFIENVRQIRIIVSDFQPQG      K
Sbjct: 1   MSAPLENLETQLEMFIENVRQIRIIVSDFQPQGQNVLNQK 40


>AY058318-1|AAL13547.1|  872|Drosophila melanogaster GH08353p
           protein.
          Length = 872

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
 Frame = +1

Query: 367 VFDYIDQGRNPQLYTKDCI-DKALAK-NEEVKGKIDSYKRFKTHLLSELSKTFPNEITKY 540
           V +Y+++  +P    K+ + ++ LAK ++EV+G +D Y R +  LL E      +E  KY
Sbjct: 467 VDEYLNKNHDP---IKEWVTEEQLAKIHQEVRGLVDEYMRVEYELLREALAKDNDE--KY 521

Query: 541 KALR 552
           KAL+
Sbjct: 522 KALK 525


>AE014296-3271|AAF49077.2|  872|Drosophila melanogaster CG14183-PA
           protein.
          Length = 872

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
 Frame = +1

Query: 367 VFDYIDQGRNPQLYTKDCI-DKALAK-NEEVKGKIDSYKRFKTHLLSELSKTFPNEITKY 540
           V +Y+++  +P    K+ + ++ LAK ++EV+G +D Y R +  LL E      +E  KY
Sbjct: 467 VDEYLNKNHDP---IKEWVTEEQLAKIHQEVRGLVDEYMRVEYELLREALAKDNDE--KY 521

Query: 541 KALR 552
           KAL+
Sbjct: 522 KALK 525


>AE014298-311|AAF45705.2|  917|Drosophila melanogaster CG4376-PC,
           isoform C protein.
          Length = 917

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 15/55 (27%), Positives = 27/55 (49%)
 Frame = +1

Query: 358 PTEVFDYIDQGRNPQLYTKDCIDKALAKNEEVKGKIDSYKRFKTHLLSELSKTFP 522
           PT  + Y+    N +    + I K L  N+E +  ++ Y+R  + LL  + +T P
Sbjct: 267 PTRQYTYVPNNYNAET-AANRICKVLKVNQENERLMEEYERLASDLLEWIRRTMP 320


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,970,441
Number of Sequences: 53049
Number of extensions: 412395
Number of successful extensions: 1021
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1018
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)