Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_E24
(654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z36753-5|CAA85334.1| 173|Caenorhabditis elegans Hypothetical pr... 101 3e-22
AL137227-7|CAB70235.1| 787|Caenorhabditis elegans Hypothetical ... 31 0.54
U41026-3|AAL02447.3| 817|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z70756-3|CAC42337.1| 2514|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z70756-2|CAA94790.2| 2531|Caenorhabditis elegans Hypothetical pr... 28 5.0
AB018598-1|BAA33886.1| 2514|Caenorhabditis elegans ATM-like prot... 28 5.0
Z81594-7|CAJ55256.1| 4404|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z80221-3|CAB02312.2| 4404|Caenorhabditis elegans Hypothetical pr... 28 6.7
AL032619-1|CAJ55259.1| 4404|Caenorhabditis elegans Hypothetical ... 28 6.7
U39667-4|AAQ91908.1| 123|Caenorhabditis elegans Xo lethal prote... 27 8.8
>Z36753-5|CAA85334.1| 173|Caenorhabditis elegans Hypothetical
protein T09A5.6 protein.
Length = 173
Score = 101 bits (243), Expect = 3e-22
Identities = 42/100 (42%), Positives = 67/100 (67%)
Frame = +1
Query: 253 FNLRXQSVLNQKIQSLVTGLQEIDKLKSQVHDIHVPTEVFDYIDQGRNPQLYTKDCIDKA 432
F + Q LN +I +LV GLQ++D++K D VP ++ Y+D G+NP LY+K C++K
Sbjct: 68 FQTKYQDALNGRIYTLVRGLQDLDRMKGTFSDKKVPLDLLPYLDDGKNPCLYSKHCMEKT 127
Query: 433 LAKNEEVKGKIDSYKRFKTHLLSELSKTFPNEITKYKALR 552
L KN+ V GKI+ YK+F+ HL+ E S+ P+ + Y+++R
Sbjct: 128 LEKNKAVNGKIEIYKKFRAHLMKEFSEEMPDLVMYYRSIR 167
>AL137227-7|CAB70235.1| 787|Caenorhabditis elegans Hypothetical
protein F58D5.6 protein.
Length = 787
Score = 31.5 bits (68), Expect = 0.54
Identities = 23/80 (28%), Positives = 40/80 (50%)
Frame = +1
Query: 313 QEIDKLKSQVHDIHVPTEVFDYIDQGRNPQLYTKDCIDKALAKNEEVKGKIDSYKRFKTH 492
Q++ LKS+ +I + DY N Q K+ IDKALA+ + +I+S + K
Sbjct: 481 QQVTLLKSKEAEIQY---IVDYFKNLTNFQQNIKNSIDKALAEKPKKTREIESLLKIKN- 536
Query: 493 LLSELSKTFPNEITKYKALR 552
+ +S+ F + KA++
Sbjct: 537 -IHRVSQEFGGGVQALKAIQ 555
>U41026-3|AAL02447.3| 817|Caenorhabditis elegans Hypothetical
protein C28G1.3 protein.
Length = 817
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 253 FNLRXQSVLNQKIQSLVTGLQEIDKLKSQVHDIHVPTEVFD 375
++ Q V + QS V +QE+ KLK Q DI T D
Sbjct: 74 YDKNIQKVCSFHYQSFVDAMQELMKLKEQCQDIKEETVAID 114
>Z70756-3|CAC42337.1| 2514|Caenorhabditis elegans Hypothetical protein
T06E4.3b protein.
Length = 2514
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +1
Query: 331 KSQVHDIHVPTEVFDYIDQGRNPQLYTKDCIDKALAKNEEVKGKIDSY-KRFKTHLLSEL 507
KS + + F + RN + K C D K+E+++ I SY K+ HLL
Sbjct: 929 KSLITETFAQLVQFLAFENNRNTTSFWKFCSDHCDFKDEDIRTVISSYRKQVFMHLLLVS 988
Query: 508 SKTFPN 525
++ F N
Sbjct: 989 AREFLN 994
>Z70756-2|CAA94790.2| 2531|Caenorhabditis elegans Hypothetical protein
T06E4.3a protein.
Length = 2531
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +1
Query: 331 KSQVHDIHVPTEVFDYIDQGRNPQLYTKDCIDKALAKNEEVKGKIDSY-KRFKTHLLSEL 507
KS + + F + RN + K C D K+E+++ I SY K+ HLL
Sbjct: 929 KSLITETFAQLVQFLAFENNRNTTSFWKFCSDHCDFKDEDIRTVISSYRKQVFMHLLLVS 988
Query: 508 SKTFPN 525
++ F N
Sbjct: 989 AREFLN 994
>AB018598-1|BAA33886.1| 2514|Caenorhabditis elegans ATM-like protein
protein.
Length = 2514
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +1
Query: 331 KSQVHDIHVPTEVFDYIDQGRNPQLYTKDCIDKALAKNEEVKGKIDSY-KRFKTHLLSEL 507
KS + + F + RN + K C D K+E+++ I SY K+ HLL
Sbjct: 929 KSLITETFAQLVQFLAFENNRNTTSFWKFCSDHCDFKDEDIRTVISSYRKQVFMHLLLVS 988
Query: 508 SKTFPN 525
++ F N
Sbjct: 989 AREFLN 994
>Z81594-7|CAJ55256.1| 4404|Caenorhabditis elegans Hypothetical protein
ZC247.1 protein.
Length = 4404
Score = 27.9 bits (59), Expect = 6.7
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Frame = +1
Query: 271 SVLNQKIQSLVTGLQEIDKLKSQVHDIHVPTEVFDY---IDQGRNPQLYTKDCIDKALAK 441
S L+ + G E S +HDI + TEV Y + P+ I++ K
Sbjct: 1088 SHLDYPVSESYDGPLETTSRASNIHDIPLTTEVHSYPTEFSYEKQPEHVIPVVIEETEKK 1147
Query: 442 NE-EVKGKIDS-YKRFKTHLLSELSKTF 519
+E +K KI +K+ +HL +S+++
Sbjct: 1148 DEPSLKSKITGLFKKSPSHLDYPVSESY 1175
Score = 27.5 bits (58), Expect = 8.8
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Frame = +1
Query: 271 SVLNQKIQSLVTGLQEIDKLKSQVHDIHVPTEVFDY---IDQGRNPQLYTKDCIDKALAK 441
S L+ + G E S +HDI + TEV Y + P+ I++ K
Sbjct: 703 SHLDYPVSESYDGPLESTSRASNIHDIPLTTEVHSYPTEFSYEKQPEHVIPVVIEETEKK 762
Query: 442 NE-EVKGKIDS-YKRFKTHLLSELSKTF 519
+E +K KI +K+ +HL +S+++
Sbjct: 763 DEPSLKSKITGLFKKSPSHLDYPVSESY 790
Score = 27.5 bits (58), Expect = 8.8
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Frame = +1
Query: 271 SVLNQKIQSLVTGLQEIDKLKSQVHDIHVPTEVFDY---IDQGRNPQLYTKDCIDKALAK 441
S L+ + G E S +HDI + TEV Y + P+ I++ K
Sbjct: 1781 SHLDYPVSESYDGPLESTSRASNIHDIPLTTEVHSYPTEFSYEKQPEHVIPVVIEETEKK 1840
Query: 442 NE-EVKGKIDS-YKRFKTHLLSELSKTF 519
+E +K KI +K+ +HL +S+++
Sbjct: 1841 DEPSLKSKITGLFKKSPSHLDYPVSESY 1868
>Z80221-3|CAB02312.2| 4404|Caenorhabditis elegans Hypothetical protein
ZC247.1 protein.
Length = 4404
Score = 27.9 bits (59), Expect = 6.7
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Frame = +1
Query: 271 SVLNQKIQSLVTGLQEIDKLKSQVHDIHVPTEVFDY---IDQGRNPQLYTKDCIDKALAK 441
S L+ + G E S +HDI + TEV Y + P+ I++ K
Sbjct: 1088 SHLDYPVSESYDGPLETTSRASNIHDIPLTTEVHSYPTEFSYEKQPEHVIPVVIEETEKK 1147
Query: 442 NE-EVKGKIDS-YKRFKTHLLSELSKTF 519
+E +K KI +K+ +HL +S+++
Sbjct: 1148 DEPSLKSKITGLFKKSPSHLDYPVSESY 1175
Score = 27.5 bits (58), Expect = 8.8
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Frame = +1
Query: 271 SVLNQKIQSLVTGLQEIDKLKSQVHDIHVPTEVFDY---IDQGRNPQLYTKDCIDKALAK 441
S L+ + G E S +HDI + TEV Y + P+ I++ K
Sbjct: 703 SHLDYPVSESYDGPLESTSRASNIHDIPLTTEVHSYPTEFSYEKQPEHVIPVVIEETEKK 762
Query: 442 NE-EVKGKIDS-YKRFKTHLLSELSKTF 519
+E +K KI +K+ +HL +S+++
Sbjct: 763 DEPSLKSKITGLFKKSPSHLDYPVSESY 790
Score = 27.5 bits (58), Expect = 8.8
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Frame = +1
Query: 271 SVLNQKIQSLVTGLQEIDKLKSQVHDIHVPTEVFDY---IDQGRNPQLYTKDCIDKALAK 441
S L+ + G E S +HDI + TEV Y + P+ I++ K
Sbjct: 1781 SHLDYPVSESYDGPLESTSRASNIHDIPLTTEVHSYPTEFSYEKQPEHVIPVVIEETEKK 1840
Query: 442 NE-EVKGKIDS-YKRFKTHLLSELSKTF 519
+E +K KI +K+ +HL +S+++
Sbjct: 1841 DEPSLKSKITGLFKKSPSHLDYPVSESY 1868
>AL032619-1|CAJ55259.1| 4404|Caenorhabditis elegans Hypothetical
protein ZC247.1 protein.
Length = 4404
Score = 27.9 bits (59), Expect = 6.7
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Frame = +1
Query: 271 SVLNQKIQSLVTGLQEIDKLKSQVHDIHVPTEVFDY---IDQGRNPQLYTKDCIDKALAK 441
S L+ + G E S +HDI + TEV Y + P+ I++ K
Sbjct: 1088 SHLDYPVSESYDGPLETTSRASNIHDIPLTTEVHSYPTEFSYEKQPEHVIPVVIEETEKK 1147
Query: 442 NE-EVKGKIDS-YKRFKTHLLSELSKTF 519
+E +K KI +K+ +HL +S+++
Sbjct: 1148 DEPSLKSKITGLFKKSPSHLDYPVSESY 1175
Score = 27.5 bits (58), Expect = 8.8
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Frame = +1
Query: 271 SVLNQKIQSLVTGLQEIDKLKSQVHDIHVPTEVFDY---IDQGRNPQLYTKDCIDKALAK 441
S L+ + G E S +HDI + TEV Y + P+ I++ K
Sbjct: 703 SHLDYPVSESYDGPLESTSRASNIHDIPLTTEVHSYPTEFSYEKQPEHVIPVVIEETEKK 762
Query: 442 NE-EVKGKIDS-YKRFKTHLLSELSKTF 519
+E +K KI +K+ +HL +S+++
Sbjct: 763 DEPSLKSKITGLFKKSPSHLDYPVSESY 790
Score = 27.5 bits (58), Expect = 8.8
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Frame = +1
Query: 271 SVLNQKIQSLVTGLQEIDKLKSQVHDIHVPTEVFDY---IDQGRNPQLYTKDCIDKALAK 441
S L+ + G E S +HDI + TEV Y + P+ I++ K
Sbjct: 1781 SHLDYPVSESYDGPLESTSRASNIHDIPLTTEVHSYPTEFSYEKQPEHVIPVVIEETEKK 1840
Query: 442 NE-EVKGKIDS-YKRFKTHLLSELSKTF 519
+E +K KI +K+ +HL +S+++
Sbjct: 1841 DEPSLKSKITGLFKKSPSHLDYPVSESY 1868
>U39667-4|AAQ91908.1| 123|Caenorhabditis elegans Xo lethal protein
1, isoform a protein.
Length = 123
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 319 IDKLKSQVHDIHVPTEVFDYIDQGRNPQLYTKDCIDKALAK 441
ID L HD H + + D+IDQ + +Y + D A+ K
Sbjct: 82 IDDLPKHAHDQHTLSILRDFIDQLKLHNVYEINFYDPAIKK 122
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,427,636
Number of Sequences: 27780
Number of extensions: 237080
Number of successful extensions: 732
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 732
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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