Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_E21
         (651 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0765 - 20421813-20423174,20423591-20423771,20423862-204241...    31   0.80 
05_03_0106 - 8463734-8463971,8464285-8464295                           31   1.1  
01_06_0597 - 30505800-30506021,30506135-30506566,30506673-30506819     31   1.1  
11_05_0010 - 18356835-18357080,18357475-18357672,18357780-183580...    29   3.2  
11_05_0007 - 18324969-18325063,18326580-18326745,18327078-183272...    29   4.2  
01_06_0599 - 30513858-30514079,30514157-30514588,30514683-30514823     29   4.2  
12_02_1286 - 27555143-27555191,27555290-27555511,27555911-275561...    27   9.8  

>10_08_0765 -
           20421813-20423174,20423591-20423771,20423862-20424117,
           20424768-20425095,20425218-20426156,20427015-20427761,
           20428517-20428789
          Length = 1361

 Score = 31.1 bits (67), Expect = 0.80
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +3

Query: 456 LFTLVKPDDELLKKFDEHSKNTDA 527
           LFT+ KP DE +  FD H +  DA
Sbjct: 514 LFTIFKPSDEPIDSFDSHDQTDDA 537


>05_03_0106 - 8463734-8463971,8464285-8464295
          Length = 82

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -3

Query: 631 CLSFIFSTMLVSFGSILILVGSFFKLFYV 545
           CL  +F  +L SFGS  I+V  FF +F V
Sbjct: 51  CLCLLFFFLLFSFGSTEIIVSRFFPVFSV 79


>01_06_0597 - 30505800-30506021,30506135-30506566,30506673-30506819
          Length = 266

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 18/36 (50%), Positives = 24/36 (66%)
 Frame = -2

Query: 416 GSYSNTHLTSPINPGAYSLPSPSHTFKSS*RVF*SA 309
           GSY N  LTSPI PGA +  + + TF+SS  +F +A
Sbjct: 107 GSY-NALLTSPILPGAGAYDAAAETFESSHDLFRAA 141


>11_05_0010 -
           18356835-18357080,18357475-18357672,18357780-18358046,
           18358870-18359067,18359151-18359417,18359524-18359724,
           18359807-18361363,18361499-18361859,18362602-18363467
          Length = 1386

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 415 PLSGWSHLAPLVTLCSRWSNLMMNFSKSLMNIQRILMQEN 534
           PLSGW+  +P  ++  RW N  +     L  I +IL Q++
Sbjct: 731 PLSGWAEFSPF-SILPRWINSSLTNLSYLSIIVKILQQKD 769


>11_05_0007 -
           18324969-18325063,18326580-18326745,18327078-18327275,
           18327377-18327643,18328070-18328129,18328767-18329033,
           18329156-18329359,18329441-18331496,18332517-18333358
          Length = 1384

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = +1

Query: 415 PLSGWSHLAPLVTLCSRWSNLMMNFSKSLMNIQRILMQEN 534
           PLS W   +PL TL  +W N  +     L  I +IL QE+
Sbjct: 768 PLSVWEEFSPLSTL-PKWINSSLTNLSYLSIIVKILRQED 806


>01_06_0599 - 30513858-30514079,30514157-30514588,30514683-30514823
          Length = 264

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = -2

Query: 416 GSYSNTHLTSPINPGAYSLPSPSHTFKSS*RVF*SA 309
           GSY N  L SPI PGA +  + + TF+SS  +F +A
Sbjct: 105 GSY-NALLASPILPGAGAYDAAAETFESSHDLFRAA 139


>12_02_1286 -
           27555143-27555191,27555290-27555511,27555911-27556162,
           27556683-27557062,27557202-27557311,27557864-27558033,
           27558236-27558444,27558528-27558617,27559125-27559264,
           27559356-27559463,27559626-27559716,27560736-27560852,
           27561497-27561767,27561892-27562193,27562400-27562469,
           27563464-27563702,27564613-27564846,27564943-27565179,
           27565276-27565734
          Length = 1249

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 19/59 (32%), Positives = 29/59 (49%)
 Frame = +3

Query: 456 LFTLVKPDDELLKKFDEHSKNTDARKLSKQT*NNLKKLPTKIRIEPKDTSIVEKMNDKH 632
           L ++ K +DEL    +EH+K    R+ S      +K    K R++  DT + E   DKH
Sbjct: 486 LHSIPKHEDELAHLREEHNKIAKERQTS-----GVKYQMLKQRLDEIDTKLRELKADKH 539


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,100,959
Number of Sequences: 37544
Number of extensions: 288558
Number of successful extensions: 636
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 635
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)