Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_E21
         (651 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical pr...    31   0.94 
U97550-3|AAK18981.2|  423|Caenorhabditis elegans Hypothetical pr...    31   0.94 
M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein ( C.ele...    31   0.94 
L16685-1|AAA28170.3|  145|Caenorhabditis elegans Hypothetical pr...    30   1.6  
AL032657-7|CAA21740.1|  340|Caenorhabditis elegans Hypothetical ...    29   2.2  
AL023830-2|CAA19473.1|  413|Caenorhabditis elegans Hypothetical ...    29   3.8  
U58752-1|AAB00664.1|  377|Caenorhabditis elegans P38 map kinase ...    28   5.0  
U41528-6|AAK39169.3|  424|Caenorhabditis elegans Hypothetical pr...    28   5.0  
L15313-1|AAA28202.1|  305|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical protein
            R107.8 protein.
          Length = 1429

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -2

Query: 419  SGSYSNTHLTSPINPGAYSLPSPSH 345
            S S  +THLT P + G+ S PSP H
Sbjct: 1337 SNSRDSTHLTPPPSDGSTSTPSPQH 1361


>U97550-3|AAK18981.2|  423|Caenorhabditis elegans Hypothetical
           protein T20F7.6 protein.
          Length = 423

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -2

Query: 464 REQSVTNGAKCDHPESGSYSNTHLTSPINPGAYSLPSPSH 345
           RE  +TN A  +H  S S S ++   P N  +YS P P+H
Sbjct: 383 REILLTNAANFEHESSNSSSPSNSALPSNQNSYSKP-PTH 421


>M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein ( C.elegans
            homeotic lin-12 protein gene, complete cds. ).
          Length = 1429

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -2

Query: 419  SGSYSNTHLTSPINPGAYSLPSPSH 345
            S S  +THLT P + G+ S PSP H
Sbjct: 1337 SNSRDSTHLTPPPSDGSTSTPSPQH 1361


>L16685-1|AAA28170.3|  145|Caenorhabditis elegans Hypothetical
           protein ZC21.8 protein.
          Length = 145

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = +3

Query: 495 KFDEHSKNTDARK--LSKQT*NNLKKLPTKIRIEPKDTSIVEKMNDK 629
           KF+ + KNT+ ++        N L K+PTK R+  KDT      N K
Sbjct: 67  KFNLNIKNTEQKRDEFDDDEENPLAKIPTKARLPKKDTLSKTSSNSK 113


>AL032657-7|CAA21740.1|  340|Caenorhabditis elegans Hypothetical
           protein Y47H9C.7 protein.
          Length = 340

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = +3

Query: 456 LFTLVKPDDELLKKFDEHSKNTDARKLSKQT*NNLKKLPTKI 581
           L+TL + DDE +KK     K  D +K+ K    ++K+L T+I
Sbjct: 101 LYTLWRDDDETIKKL----KTADMKKIKKDLQASIKELVTEI 138


>AL023830-2|CAA19473.1|  413|Caenorhabditis elegans Hypothetical
           protein Y26E6A.2 protein.
          Length = 413

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +1

Query: 475 LMMNFSKSLMNIQRILMQENSPNKHRTT*RSCXPKSELNQK 597
           L+++FS   MN++ IL +    N+       C  +SE+N+K
Sbjct: 187 LILDFSSGEMNVRWILEKNQQENESDPDSEKCLNQSEVNEK 227


>U58752-1|AAB00664.1|  377|Caenorhabditis elegans P38 map kinase
           family protein 1 protein.
          Length = 377

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = +3

Query: 474 PDDELLKKFDEHSKNTDARKLSKQT*NNLKKLPTKIRIEPKDTSIVEKM 620
           PD+E LKK          R L K T  + K+L    +  P+   ++EKM
Sbjct: 253 PDEEFLKKISSEEARNYIRNLPKMTRRDFKRL--FAQATPQAIDLLEKM 299


>U41528-6|AAK39169.3|  424|Caenorhabditis elegans Hypothetical
           protein C15C7.6 protein.
          Length = 424

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 21/65 (32%), Positives = 32/65 (49%)
 Frame = +3

Query: 342 SVGRRGQTVSSGIYRTGEMSIAIRATFWVVTFGTIGYALFTLVKPDDELLKKFDEHSKNT 521
           +V    QT+  G Y T +M I+   +  ++  G+  YA F  VK   + L  FD  + NT
Sbjct: 278 AVAEAYQTMIHGHYSTHQMGISQHVSL-LLPIGS--YAKFNNVKVFGKSLNAFDHFAVNT 334

Query: 522 DARKL 536
           +A  L
Sbjct: 335 EADHL 339


>L15313-1|AAA28202.1|  305|Caenorhabditis elegans Hypothetical
           protein ZK353.4 protein.
          Length = 305

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +3

Query: 318 KNSSTRLKSVGRRGQTVSSGIYRTGEMSIAI 410
           KNS T LK+   +    SS   RTGE+S+ I
Sbjct: 159 KNSLTDLKNEATKMANTSSSANRTGEISVEI 189


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,068,621
Number of Sequences: 27780
Number of extensions: 286399
Number of successful extensions: 782
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 782
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)