Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_E20
         (652 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88168-4|AAC24402.1|  342|Caenorhabditis elegans Hypothetical pr...    83   1e-16
Z81118-9|CAM84694.1|  208|Caenorhabditis elegans Hypothetical pr...    33   0.18 
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr...    29   2.2  
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha...    29   2.2  
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha...    29   2.2  
U21323-2|AAM22051.1|  155|Caenorhabditis elegans Hypothetical pr...    29   2.9  
U21323-1|AAM22050.1|  542|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical pr...    28   5.0  
AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical ...    28   5.0  
AF016445-6|AAC69053.1|  250|Caenorhabditis elegans Hypothetical ...    28   5.0  
AF016445-4|AAC69058.1|  312|Caenorhabditis elegans Hypothetical ...    27   8.7  
AC199169-4|ABO33250.1|  275|Caenorhabditis elegans Hypothetical ...    27   8.7  

>U88168-4|AAC24402.1|  342|Caenorhabditis elegans Hypothetical
           protein K11H12.8a protein.
          Length = 342

 Score = 83.4 bits (197), Expect = 1e-16
 Identities = 38/76 (50%), Positives = 52/76 (68%)
 Frame = +2

Query: 410 QVLFRESHLWPQYVKERIKTTYGYIAGSLVLTAGSAVAVFRTPALLNLVARNGWMSIIVT 589
           Q + ++S +WP YV+ERI TTY Y+AGSL LTA S VA  R+ A++ L A  G MS+  T
Sbjct: 96  QSILQKSAIWPSYVRERISTTYAYLAGSLALTAVSGVAASRSAAIMRLTAGGGMMSLFGT 155

Query: 590 LGLMIGSGMVXRGMEY 637
           +  MI SGM+ R ++Y
Sbjct: 156 MAAMIASGMLARSIDY 171


>Z81118-9|CAM84694.1|  208|Caenorhabditis elegans Hypothetical
           protein T10G3.8 protein.
          Length = 208

 Score = 33.1 bits (72), Expect = 0.18
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +1

Query: 208 NFVPRNYVVRNYAREPRTRVATRSQPTLRERLMAP 312
           + VP+N V +N + +PR RV TR  P+   +L  P
Sbjct: 119 SLVPKNEVKKNASPQPRVRVITRKSPSPLRKLSTP 153


>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
            K08C7.3b protein.
          Length = 3672

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = -1

Query: 577  GHPSISCYQI*KCGCSENSNCTTS-SQHQRTRDVSIC 470
            GHP IS      C C+ N+N T S S H  + D  +C
Sbjct: 1925 GHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLC 1961


>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
            K08C7.3a protein.
          Length = 3704

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = -1

Query: 577  GHPSISCYQI*KCGCSENSNCTTS-SQHQRTRDVSIC 470
            GHP IS      C C+ N+N T S S H  + D  +C
Sbjct: 1925 GHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLC 1961


>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
            chain protein.
          Length = 3704

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = -1

Query: 577  GHPSISCYQI*KCGCSENSNCTTS-SQHQRTRDVSIC 470
            GHP IS      C C+ N+N T S S H  + D  +C
Sbjct: 1925 GHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLC 1961


>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
            protein.
          Length = 3704

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = -1

Query: 577  GHPSISCYQI*KCGCSENSNCTTS-SQHQRTRDVSIC 470
            GHP IS      C C+ N+N T S S H  + D  +C
Sbjct: 1925 GHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLC 1961


>U21323-2|AAM22051.1|  155|Caenorhabditis elegans Hypothetical
           protein C45G9.6b protein.
          Length = 155

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +3

Query: 150 VYRSLGVQCNAESKIASTTKFCTEKLCGQKLCTRTSNKG 266
           V R  G  CN+ +   S   +CT  + G K+C  TSN G
Sbjct: 58  VQRDEGGYCNSNTDCRSGL-YCTASVNGVKICLSTSNGG 95


>U21323-1|AAM22050.1|  542|Caenorhabditis elegans Hypothetical
           protein C45G9.6a protein.
          Length = 542

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +3

Query: 150 VYRSLGVQCNAESKIASTTKFCTEKLCGQKLCTRTSNKG 266
           V R  G  CN+ +   S   +CT  + G K+C  TSN G
Sbjct: 58  VQRDEGGYCNSNTDCRSGL-YCTASVNGVKICLSTSNGG 95


>Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical protein
            F40E10.4 protein.
          Length = 1410

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
 Frame = +3

Query: 87   KNLNPVEINVYVFRINYVITNVYRSLGVQCNAESKIASTTKFCTEKLCGQKLCTRT--SN 260
            KN   ++  +    IN V  N+ ++L    N E   ++T  FC    CG   CT    S 
Sbjct: 1251 KNSESLKGCISSITINEVPINLQQALE-NVNTEQSCSATVNFCAGIDCGNGKCTNNALSP 1309

Query: 261  KG-RYTLTTHTSGE 299
            KG      +H SGE
Sbjct: 1310 KGYMCQCDSHFSGE 1323


>AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical
            protein F40E10.4 protein.
          Length = 1410

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
 Frame = +3

Query: 87   KNLNPVEINVYVFRINYVITNVYRSLGVQCNAESKIASTTKFCTEKLCGQKLCTRT--SN 260
            KN   ++  +    IN V  N+ ++L    N E   ++T  FC    CG   CT    S 
Sbjct: 1251 KNSESLKGCISSITINEVPINLQQALE-NVNTEQSCSATVNFCAGIDCGNGKCTNNALSP 1309

Query: 261  KG-RYTLTTHTSGE 299
            KG      +H SGE
Sbjct: 1310 KGYMCQCDSHFSGE 1323


>AF016445-6|AAC69053.1|  250|Caenorhabditis elegans Hypothetical
           protein T05B4.10 protein.
          Length = 250

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 19/73 (26%), Positives = 30/73 (41%)
 Frame = +3

Query: 141 ITNVYRSLGVQCNAESKIASTTKFCTEKLCGQKLCTRTSNKGRYTLTTHTSGETHGTCWT 320
           +TN    L + CN          +C ++ CG+  C  T+  G  T+T+       GTC +
Sbjct: 163 VTNCGNDLSI-CNTVGMQTFVNTYC-QRTCGR--CPSTTASGSVTVTS-------GTCTS 211

Query: 321 KCIQLGQGCISWS 359
                   C +WS
Sbjct: 212 YIADSSSNCAAWS 224


>AF016445-4|AAC69058.1|  312|Caenorhabditis elegans Hypothetical
           protein T05B4.8 protein.
          Length = 312

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 17/55 (30%), Positives = 23/55 (41%)
 Frame = +3

Query: 243 CTRTSNKGRYTLTTHTSGETHGTCWTKCIQLGQGCISWSLCSWTSCSVLLWLWGK 407
           C RT  +   T T+ +   T GTC +        C SW+  +   C VL  L  K
Sbjct: 9   CQRTCGRCPSTTTSGSVTVTSGTCTSYIADSSSNCASWARTT-RFCVVLSLLLNK 62


>AC199169-4|ABO33250.1|  275|Caenorhabditis elegans Hypothetical
           protein F38A1.10 protein.
          Length = 275

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 607 FWHGXKRNGVHTWIW 651
           FW G  RN + +W+W
Sbjct: 86  FWIGLSRNNISSWVW 100


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,533,640
Number of Sequences: 27780
Number of extensions: 340105
Number of successful extensions: 992
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 992
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)