Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_E18
(472 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0539 + 3869156-3869908 89 1e-18
06_01_0529 + 3831100-3831852 89 1e-18
11_06_0394 - 23084485-23084577,23084677-23084802,23085134-230852... 66 1e-11
08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323 59 2e-09
09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341 57 6e-09
06_01_0479 + 3419657-3420337 56 1e-08
03_01_0568 - 4192514-4192606,4192694-4192753,4192837-4192932,419... 56 2e-08
01_06_1091 + 34464923-34465026,34465124-34465163,34465245-344653... 54 4e-08
05_05_0306 - 23977543-23977614,23977709-23977799,23978296-239783... 54 6e-08
02_05_0057 + 25472872-25472912,25473012-25473157,25474008-254740... 33 0.088
02_05_0082 + 25679089-25679253,25680998-25681030,25681758-25682579 30 1.1
03_03_0187 + 15253000-15253207,15253281-15253370,15254338-152544... 29 1.4
09_02_0305 - 7122320-7122436,7122781-7122787,7122833-7123023 28 4.4
05_01_0588 + 5278013-5278153,5278641-5278782,5278923-5279019,527... 27 5.8
>06_01_0539 + 3869156-3869908
Length = 250
Score = 89.4 bits (212), Expect = 1e-18
Identities = 40/70 (57%), Positives = 55/70 (78%)
Frame = +3
Query: 144 TTIFSPEGRLYQVEYAMEAXTHAGTSLGIXATDGILLAAERRNTNKLLDEVFSSEKIYXL 323
TTIFSPEGRLYQVEYAMEA +AG++LG+ A DG++L E++ T+KLL S+EK+Y +
Sbjct: 9 TTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKI 68
Query: 324 NDDMVCSVAG 353
+ + C+VAG
Sbjct: 69 DSHLACAVAG 78
Score = 46.8 bits (106), Expect = 9e-06
Identities = 23/39 (58%), Positives = 24/39 (61%)
Frame = +1
Query: 352 GITSDANVXTNEXRLIAXRYLLQYGESIPCEQXVSWLCD 468
GI SDAN+ N RL A RY L Y E IP EQ V LCD
Sbjct: 78 GIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCD 116
>06_01_0529 + 3831100-3831852
Length = 250
Score = 89.4 bits (212), Expect = 1e-18
Identities = 40/70 (57%), Positives = 55/70 (78%)
Frame = +3
Query: 144 TTIFSPEGRLYQVEYAMEAXTHAGTSLGIXATDGILLAAERRNTNKLLDEVFSSEKIYXL 323
TTIFSPEGRLYQVEYAMEA +AG++LG+ A DG++L E++ T+KLL S+EK+Y +
Sbjct: 9 TTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKI 68
Query: 324 NDDMVCSVAG 353
+ + C+VAG
Sbjct: 69 DSHLACAVAG 78
Score = 46.8 bits (106), Expect = 9e-06
Identities = 23/39 (58%), Positives = 24/39 (61%)
Frame = +1
Query: 352 GITSDANVXTNEXRLIAXRYLLQYGESIPCEQXVSWLCD 468
GI SDAN+ N RL A RY L Y E IP EQ V LCD
Sbjct: 78 GIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCD 116
>11_06_0394 -
23084485-23084577,23084677-23084802,23085134-23085236,
23085895-23085953,23086418-23086519,23086601-23086714,
23087666-23087746,23088073-23088154,23088504-23088556
Length = 270
Score = 66.1 bits (154), Expect = 1e-11
Identities = 32/67 (47%), Positives = 48/67 (71%)
Frame = +3
Query: 153 FSPEGRLYQVEYAMEAXTHAGTSLGIXATDGILLAAERRNTNKLLDEVFSSEKIYXLNDD 332
FSPEGRL+QVEYA+EA T++G+ DG++LA E+R T+ LL E S EKI +++
Sbjct: 28 FSPEGRLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSPLL-EPSSVEKIMEIDEH 86
Query: 333 MVCSVAG 353
+ C+++G
Sbjct: 87 IGCAMSG 93
>08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323
Length = 319
Score = 59.3 bits (137), Expect = 2e-09
Identities = 29/71 (40%), Positives = 44/71 (61%)
Frame = +3
Query: 141 ATTIFSPEGRLYQVEYAMEAXTHAGTSLGIXATDGILLAAERRNTNKLLDEVFSSEKIYX 320
A T+FSP+G L+QVEYA+EA ++G+ TD ++L E+++T KL D S KI
Sbjct: 77 AITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDS-RSMRKIAS 135
Query: 321 LNDDMVCSVAG 353
L+ + + AG
Sbjct: 136 LDTHIALACAG 146
>09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341
Length = 249
Score = 57.2 bits (132), Expect = 6e-09
Identities = 28/71 (39%), Positives = 44/71 (61%)
Frame = +3
Query: 141 ATTIFSPEGRLYQVEYAMEAXTHAGTSLGIXATDGILLAAERRNTNKLLDEVFSSEKIYX 320
A T+FSP+G L+QVEYA+EA ++G+ +D ++L E+++T KL D S KI
Sbjct: 7 AITVFSPDGHLFQVEYALEAVRKGNAAVGVRGSDTVVLGVEKKSTPKLQDS-RSVRKIAS 65
Query: 321 LNDDMVCSVAG 353
L+ + + AG
Sbjct: 66 LDTHIALACAG 76
>06_01_0479 + 3419657-3420337
Length = 226
Score = 56.0 bits (129), Expect = 1e-08
Identities = 24/54 (44%), Positives = 39/54 (72%)
Frame = +3
Query: 192 MEAXTHAGTSLGIXATDGILLAAERRNTNKLLDEVFSSEKIYXLNDDMVCSVAG 353
MEA +AG++LG+ A DG++L E++ T+KLL S+EK+Y ++ + C+VAG
Sbjct: 1 MEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAG 54
Score = 46.8 bits (106), Expect = 9e-06
Identities = 23/39 (58%), Positives = 24/39 (61%)
Frame = +1
Query: 352 GITSDANVXTNEXRLIAXRYLLQYGESIPCEQXVSWLCD 468
GI SDAN+ N RL A RY L Y E IP EQ V LCD
Sbjct: 54 GIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCD 92
>03_01_0568 -
4192514-4192606,4192694-4192753,4192837-4192932,
4193088-4193170,4193289-4193347,4193463-4193559,
4194151-4194232,4194353-4194447,4194585-4194660
Length = 246
Score = 55.6 bits (128), Expect = 2e-08
Identities = 26/49 (53%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = +3
Query: 147 TIFSPEGRLYQVEYAMEAXTHAG-TSLGIXATDGILLAAERRNTNKLLD 290
TIFSPEGRLYQVEYA +A AG TS+G+ D + + +++ +KLLD
Sbjct: 14 TIFSPEGRLYQVEYAFKAVKSAGVTSIGVRGKDSVCVVTQKKVPDKLLD 62
>01_06_1091 +
34464923-34465026,34465124-34465163,34465245-34465328,
34465457-34465480,34465582-34465655,34465726-34465812,
34465922-34466006,34466215-34466261,34467048-34467113,
34468307-34468397,34468477-34468548
Length = 257
Score = 54.4 bits (125), Expect = 4e-08
Identities = 24/51 (47%), Positives = 37/51 (72%)
Frame = +3
Query: 141 ATTIFSPEGRLYQVEYAMEAXTHAGTSLGIXATDGILLAAERRNTNKLLDE 293
+ T FSP+GR++QVEYA +A ++GT +GI DGI+L E+ T+K++ E
Sbjct: 11 SVTTFSPDGRVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMMLE 61
>05_05_0306 -
23977543-23977614,23977709-23977799,23978296-23978361,
23978399-23978479,23979130-23979176,23979408-23979492,
23979570-23979656,23979728-23979801,23980083-23980166,
23980259-23980298,23980386-23980489
Length = 276
Score = 54.0 bits (124), Expect = 6e-08
Identities = 27/71 (38%), Positives = 48/71 (67%)
Frame = +3
Query: 141 ATTIFSPEGRLYQVEYAMEAXTHAGTSLGIXATDGILLAAERRNTNKLLDEVFSSEKIYX 320
+ T FSP+GR++QVEYA +A ++GT +GI DGI+L E+ T+K++ + S+ +++
Sbjct: 11 SVTTFSPDGRVFQVEYAGKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMILK-GSNRRLHS 69
Query: 321 LNDDMVCSVAG 353
++ +VAG
Sbjct: 70 VHRHSGLAVAG 80
>02_05_0057 +
25472872-25472912,25473012-25473157,25474008-25474072,
25474182-25474228,25474922-25474997,25475176-25475243,
25475862-25475931,25476178-25476263,25476418-25476480,
25476556-25476621,25476740-25476788
Length = 258
Score = 33.5 bits (73), Expect = 0.088
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 147 TIFSPEGRLYQVEYAMEAXTHAGTSLGI 230
T FSP G+L Q+E+A+ A TSLGI
Sbjct: 11 TTFSPSGKLVQIEHALTAVGSGQTSLGI 38
>02_05_0082 + 25679089-25679253,25680998-25681030,25681758-25682579
Length = 339
Score = 29.9 bits (64), Expect = 1.1
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +1
Query: 145 QPYSRRKVVCIKSNMLWKLXLMREHRWVFXQRMVFFW 255
QP ++K+ + S LW L+R+ WV + +F+
Sbjct: 60 QPQQQQKIAAVVSLQLWTATLLRDASWVKILTVAYFF 96
>03_03_0187 +
15253000-15253207,15253281-15253370,15254338-15254402,
15254489-15254535,15255195-15255270,15255432-15255499,
15255793-15255862,15256024-15256109,15256328-15256390,
15256472-15256537,15256938-15256986
Length = 295
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 156 SPEGRLYQVEYAMEAXTHAGTSLGI 230
SP G+L Q+E+A+ A TSLGI
Sbjct: 44 SPSGKLVQIEHALTAVGSGQTSLGI 68
>09_02_0305 - 7122320-7122436,7122781-7122787,7122833-7123023
Length = 104
Score = 27.9 bits (59), Expect = 4.4
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 316 TSSMMTWSVQSLGITSDANVXTNEXRLIAXRYLLQYGESI 435
+SS TWS++ + +S A RLI+ Y +Y E +
Sbjct: 30 SSSSTTWSIKIIQASSSAAYQKVSDRLISNEYAARYPEQL 69
>05_01_0588 +
5278013-5278153,5278641-5278782,5278923-5279019,
5279130-5279199,5279284-5279388,5279531-5279629,
5280062-5280152,5280238-5280311
Length = 272
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +3
Query: 216 TSLGIXATDGILLAAERRNTNKLLDEVFSSEKIYXLNDDMVCSVAG 353
T +G+ DG++L A+ R T + + EKI+ + ++ C AG
Sbjct: 40 TIVGLVFQDGVVLGADTRATEGPIVADKNCEKIHYMAPNIYCCGAG 85
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,831,028
Number of Sequences: 37544
Number of extensions: 186314
Number of successful extensions: 366
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 365
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 955200320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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