Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_E18
(472 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome al... 103 6e-23
Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical pr... 64 5e-11
Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical pr... 58 4e-09
Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical pr... 56 1e-08
AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome al... 47 6e-06
Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical pr... 47 8e-06
Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical pr... 46 1e-05
U61955-4|AAC24407.1| 772|Caenorhabditis elegans Zygotic epiderm... 29 1.7
U61955-3|AAC24406.1| 775|Caenorhabditis elegans Zygotic epiderm... 29 1.7
U61955-2|AAM97993.1| 777|Caenorhabditis elegans Zygotic epiderm... 29 1.7
AF057568-1|AAC33438.1| 772|Caenorhabditis elegans kinesin-like ... 29 1.7
AF057567-1|AAC33437.1| 775|Caenorhabditis elegans kinesin-like ... 29 1.7
>AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome alpha
subunit protein 3 protein.
Length = 250
Score = 103 bits (247), Expect = 6e-23
Identities = 46/70 (65%), Positives = 61/70 (87%)
Frame = +3
Query: 144 TTIFSPEGRLYQVEYAMEAXTHAGTSLGIXATDGILLAAERRNTNKLLDEVFSSEKIYXL 323
TTIFSPEGRLYQVEYAMEA +HAGT LGI +++GI++AAER+N +KLLD+ +EK+Y L
Sbjct: 9 TTIFSPEGRLYQVEYAMEAISHAGTCLGILSSEGIVVAAERKNVHKLLDDSVMTEKVYRL 68
Query: 324 NDDMVCSVAG 353
+D++ C+VAG
Sbjct: 69 SDNISCTVAG 78
Score = 40.3 bits (90), Expect = 7e-04
Identities = 19/39 (48%), Positives = 23/39 (58%)
Frame = +1
Query: 352 GITSDANVXTNEXRLIAXRYLLQYGESIPCEQXVSWLCD 468
GIT+DAN+ N R A Y YGE +P EQ V LC+
Sbjct: 78 GITADANILINHLRWWAASYRNSYGEEMPVEQLVQNLCN 116
>Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical
protein F25H2.9 protein.
Length = 248
Score = 64.1 bits (149), Expect = 5e-11
Identities = 33/67 (49%), Positives = 48/67 (71%)
Frame = +3
Query: 153 FSPEGRLYQVEYAMEAXTHAGTSLGIXATDGILLAAERRNTNKLLDEVFSSEKIYXLNDD 332
FSPEGRL+QVEYA+EA TS+GI ++G+LLAAE+R+T+KL+ + EKI ++
Sbjct: 15 FSPEGRLFQVEYAIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLMVN-DAIEKISKVDQH 73
Query: 333 MVCSVAG 353
+ + AG
Sbjct: 74 IGVTFAG 80
>Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical
protein C36B1.4 protein.
Length = 253
Score = 57.6 bits (133), Expect = 4e-09
Identities = 32/97 (32%), Positives = 55/97 (56%)
Frame = +3
Query: 141 ATTIFSPEGRLYQVEYAMEAXTHAGTSLGIXATDGILLAAERRNTNKLLDEVFSSEKIYX 320
A TIFSP+G L+QVEYA EA T++G+ D I++ E+++ L D+ + KI+
Sbjct: 7 AITIFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDCIVIGVEKKSIPALQDD-RTIRKIHM 65
Query: 321 LNDDMVCSVAGYNIGC*RXDKRXKTDRSXIPAAIWRI 431
++D ++ + AG + D R DR+ I +++
Sbjct: 66 IDDHVMLAFAGLS-----ADARVLVDRARIECQSYKL 97
>Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical
protein ZK945.2 protein.
Length = 250
Score = 56.4 bits (130), Expect = 1e-08
Identities = 25/71 (35%), Positives = 50/71 (70%)
Frame = +3
Query: 141 ATTIFSPEGRLYQVEYAMEAXTHAGTSLGIXATDGILLAAERRNTNKLLDEVFSSEKIYX 320
A + FSP+GR++QVEYA +A +AGT + I +G+++ A++ ++KL + ++ +++
Sbjct: 11 AASTFSPDGRIFQVEYAQKAVDNAGTMIAIRGKNGVVVVADKLISSKLYTD-NANPRMFN 69
Query: 321 LNDDMVCSVAG 353
+ND++ +VAG
Sbjct: 70 VNDNVGVAVAG 80
>AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome alpha
subunit protein 6 protein.
Length = 260
Score = 47.2 bits (107), Expect = 6e-06
Identities = 24/69 (34%), Positives = 40/69 (57%)
Frame = +3
Query: 147 TIFSPEGRLYQVEYAMEAXTHAGTSLGIXATDGILLAAERRNTNKLLDEVFSSEKIYXLN 326
T++SP+GRL+QVEYA+EA ++GI + ++ A +R N L +K+Y ++
Sbjct: 11 TVWSPQGRLHQVEYAVEAMKQGSATVGIKSETHAVIVALKRAQNDLSSH---QKKVYEID 67
Query: 327 DDMVCSVAG 353
S+AG
Sbjct: 68 THAGVSIAG 76
>Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical
protein C15H11.7 protein.
Length = 246
Score = 46.8 bits (106), Expect = 8e-06
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Frame = +3
Query: 147 TIFSPEGRLYQVEYAMEAXTHAG-TSLGIXATDGILLAAERRNTNKLL--DEVFSSEKIY 317
TIFSPEGR+YQVEYA +A T++ + D ++A ++R + L+ D V S +Y
Sbjct: 14 TIFSPEGRVYQVEYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSLIVADTVTS---VY 70
Query: 318 XLNDDMVCSVAG 353
++ + C G
Sbjct: 71 QISQSVGCCAIG 82
>Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical
protein D1054.2 protein.
Length = 231
Score = 46.0 bits (104), Expect = 1e-05
Identities = 24/69 (34%), Positives = 39/69 (56%)
Frame = +3
Query: 147 TIFSPEGRLYQVEYAMEAXTHAGTSLGIXATDGILLAAERRNTNKLLDEVFSSEKIYXLN 326
T FSP G+L Q+EYA+ A + S+G+ A DG++LA E N +L + K+ ++
Sbjct: 10 TTFSPSGKLMQIEYALNAVKNGQPSVGLRAKDGVVLATE--NVGSVLTD--DQPKVEQIS 65
Query: 327 DDMVCSVAG 353
+ C +G
Sbjct: 66 KHIGCVYSG 74
>U61955-4|AAC24407.1| 772|Caenorhabditis elegans Zygotic epidermal
enclosure defectiveprotein 4, isoform b protein.
Length = 772
Score = 29.1 bits (62), Expect = 1.7
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +3
Query: 252 LAAERRNTNK-LLDEVFSSEKIYXLNDDMVCSV 347
+AA+R +T++ + D + K+ NDDMVCSV
Sbjct: 177 MAADRLSTSREITDRYCEAIKLSGYNDDMVCSV 209
>U61955-3|AAC24406.1| 775|Caenorhabditis elegans Zygotic epidermal
enclosure defectiveprotein 4, isoform a protein.
Length = 775
Score = 29.1 bits (62), Expect = 1.7
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +3
Query: 252 LAAERRNTNK-LLDEVFSSEKIYXLNDDMVCSV 347
+AA+R +T++ + D + K+ NDDMVCSV
Sbjct: 177 MAADRLSTSREITDRYCEAIKLSGYNDDMVCSV 209
>U61955-2|AAM97993.1| 777|Caenorhabditis elegans Zygotic epidermal
enclosure defectiveprotein 4, isoform c protein.
Length = 777
Score = 29.1 bits (62), Expect = 1.7
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +3
Query: 252 LAAERRNTNK-LLDEVFSSEKIYXLNDDMVCSV 347
+AA+R +T++ + D + K+ NDDMVCSV
Sbjct: 177 MAADRLSTSREITDRYCEAIKLSGYNDDMVCSV 209
>AF057568-1|AAC33438.1| 772|Caenorhabditis elegans kinesin-like
protein ZEN-4b protein.
Length = 772
Score = 29.1 bits (62), Expect = 1.7
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +3
Query: 252 LAAERRNTNK-LLDEVFSSEKIYXLNDDMVCSV 347
+AA+R +T++ + D + K+ NDDMVCSV
Sbjct: 177 MAADRLSTSREITDRYCEAIKLSGYNDDMVCSV 209
>AF057567-1|AAC33437.1| 775|Caenorhabditis elegans kinesin-like
protein ZEN-4a protein.
Length = 775
Score = 29.1 bits (62), Expect = 1.7
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +3
Query: 252 LAAERRNTNK-LLDEVFSSEKIYXLNDDMVCSV 347
+AA+R +T++ + D + K+ NDDMVCSV
Sbjct: 177 MAADRLSTSREITDRYCEAIKLSGYNDDMVCSV 209
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,531,219
Number of Sequences: 27780
Number of extensions: 170995
Number of successful extensions: 393
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 393
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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