Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_E16
(655 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0928 + 26024589-26024645,26024900-26024956,26025464-260257... 103 1e-22
02_05_0759 + 31545473-31546204 64 7e-11
07_03_1116 - 24084162-24084201,24084481-24084570,24084640-240852... 30 1.9
03_05_1080 + 30229828-30230707,30230861-30231110,30231265-30231499 29 4.3
03_02_0358 + 7784067-7784128,7784239-7785040,7785513-7785617,778... 29 4.3
03_05_0640 - 26326832-26327166,26327295-26327529,26327665-263279... 28 7.5
08_01_0509 + 4433837-4434437,4434564-4434636,4435408-4437367,443... 27 9.9
04_01_0487 + 6406826-6407086,6413538-6413996,6414401-6414570,641... 27 9.9
>06_03_0928 +
26024589-26024645,26024900-26024956,26025464-26025707,
26026126-26026238,26026675-26026761,26026843-26026962
Length = 225
Score = 103 bits (247), Expect = 1e-22
Identities = 56/175 (32%), Positives = 96/175 (54%), Gaps = 2/175 (1%)
Frame = +1
Query: 130 RSLSTSVA--SAQMVKPPVQVFGLEGRYASALFSAASKTKALDIVEKELCQFQQSIKTDA 303
R ++ VA + + +K P ++G G YASALF A+K LD VE E+ ++ K
Sbjct: 23 RGFASQVAKPTGKDIKVPEALYGGTGNYASALFLTAAKANLLDKVETEIRDVVEASKKSP 82
Query: 304 KLKEFIINPTIKRSMKVDALKHVANKISLSPTTGNLLGLLAENGRLGKLEAVINAFKIMM 483
+FI + ++ + +V A+ + + S T N L +LA+NGRL ++ + F +
Sbjct: 83 LFSQFIKDLSVPKETRVKAITEIFAEAGFSDVTKNFLAVLADNGRLKHIDRIAERFVDLT 142
Query: 484 AAHRGEVACEVVTAKPLDQAQRQNLEAALKKFLKGNETVQLTAKVDPSLIGGMVV 648
AH+GEV V T PL + + + L+ L+ L N+T+ + K+D S++GG+V+
Sbjct: 143 MAHKGEVKVLVRTVIPLPEKEEKELKETLQDILGKNKTILIEQKIDYSIMGGLVI 197
>02_05_0759 + 31545473-31546204
Length = 243
Score = 64.5 bits (150), Expect = 7e-11
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 2/150 (1%)
Frame = +1
Query: 205 YASALFSAASKTKALDIVEKELCQFQQSIKTDAKLKEFIINPTIKRSMKVDALKHVANKI 384
YA+AL AS+ L+ +L + ++ +A + EF NPT+ R K + +A
Sbjct: 64 YATALSEVASENGTLEATVSDLEKLEKIFAEEA-IAEFFDNPTVPRDEKAQLIDEIAKSS 122
Query: 385 SLSPTTGNLLGLLAENGRLGKLEAVINAFKIMMAAHRGEVACEVVTAKPLDQAQRQNLEA 564
L N L ++ +NGR G + ++ F+ A EV T + Q + Q+L
Sbjct: 123 ELQAHVVNFLNVVVDNGRAGLMTQIVREFE---NAFNSLTGTEVATVTSVVQLESQDLAQ 179
Query: 565 ALKKF--LKGNETVQLTAKVDPSLIGGMVV 648
++ L G + V++ ++DP LI G +
Sbjct: 180 IAQQVQNLTGAKNVRVKTRIDPELIAGFTI 209
>07_03_1116 -
24084162-24084201,24084481-24084570,24084640-24085220,
24085653-24085822,24086006-24087074
Length = 649
Score = 29.9 bits (64), Expect = 1.9
Identities = 35/129 (27%), Positives = 50/129 (38%), Gaps = 6/129 (4%)
Frame = +1
Query: 193 LEGRYASALFSAASKTKALDIVEKELCQF--QQSIKTDAKLKEFIINPTIKRSMKVDALK 366
LE Y S A K KAL+ + E C+ ++ AK + F+ R V AL
Sbjct: 56 LEKSYKSKCDELAEKQKALEEKKAESCRLIAEKEANVSAKERAFLNQFQELRDTAVSALS 115
Query: 367 HVANKISLSPTTGNLLGLLAENG-RLGKLEAVINAFKIMMAAHRGEVAC---EVVTAKPL 534
V K + L G+L NG + K+ N + A+ A E A P+
Sbjct: 116 EVRQKYKV-----ELAGILDANGSKDKKVRTSTNDMNALCASEENTTASGLGEPSEASPV 170
Query: 535 DQAQRQNLE 561
D R L+
Sbjct: 171 DVKPRPVLK 179
>03_05_1080 + 30229828-30230707,30230861-30231110,30231265-30231499
Length = 454
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -3
Query: 488 AAIIILKALMTASSFPKRPFSASNPSRLPVVG 393
AA+ +L+ A++ +RP + P RLPV+G
Sbjct: 15 AAVALLQLAKVAATMRRRPRTPPGPWRLPVIG 46
>03_02_0358 +
7784067-7784128,7784239-7785040,7785513-7785617,
7785835-7786194
Length = 442
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Frame = +1
Query: 490 HRGEVACEVV-----TAKPLDQAQR-QNLEAALKKFLKGNETVQLTAKVDPSLIGGM 642
H G VA V T P+D A R + +E+ L+ L+G T DPS G +
Sbjct: 155 HGGRVAALVFVRDEETGAPIDDAARVRRIESRLRHVLRGGARCARTVLADPSAAGNL 211
>03_05_0640 -
26326832-26327166,26327295-26327529,26327665-26327908,
26328389-26328507,26328860-26329050,26329133-26329220,
26331653-26331715,26331816-26333944,26334084-26334186
Length = 1168
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = -1
Query: 271 RVLFPRCQAPWSLMLLKKERKHTDLPIQILALEVLPFVLMRHLCSKSEPADSPLKP 104
RV P + S ++ RK + L + L ++ F+ +C P DSP+ P
Sbjct: 317 RVQTPEPEPTASSERARRPRKRSSLRFLVAPLALVVFMAAALICVPPPPVDSPVMP 372
>08_01_0509 + 4433837-4434437,4434564-4434636,4435408-4437367,
4437721-4437990,4438168-4438605,4438772-4439043,
4439126-4439274,4439339-4439470,4439554-4439880,
4439963-4440357,4440551-4440861,4441304-4441394,
4441806-4441847
Length = 1686
Score = 27.5 bits (58), Expect = 9.9
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 3/110 (2%)
Frame = +1
Query: 46 PKV*KILLTCANIFLNKIMSALKGNLLVRSLSTSVASAQMVKPPVQVFGLEGRYASA-LF 222
PK+ + NIFLN+ AL GN + L + + V + Y SA +
Sbjct: 1016 PKIIHRDIRAVNIFLNEDFEALVGNFCLAKLEDDMDTDDRTAVRGVVGHIAPEYLSAGIL 1075
Query: 223 SAASKTKALDIVEKELCQFQQSIKTD--AKLKEFIINPTIKRSMKVDALK 366
S + I+ EL ++++ D A+ ++ + +KR +K LK
Sbjct: 1076 SEKTDVYGYGIMLLELITGKRALYHDGRARDEDIFLLDWVKRLLKEKKLK 1125
>04_01_0487 +
6406826-6407086,6413538-6413996,6414401-6414570,
6415146-6415175,6415777-6415939,6416020-6417132
Length = 731
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 436 RLGKLEAVINAFKIMMAAHRGEVACEVVT 522
+LG +EAV +AF+ M+ AH + E+ T
Sbjct: 698 KLGYVEAVEDAFRCMVEAHPNQPTLEIET 726
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,795,986
Number of Sequences: 37544
Number of extensions: 365286
Number of successful extensions: 928
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 928
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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