Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_E15
(657 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0242 + 26638401-26638781 30 1.4
12_01_0772 - 7016864-7017012,7017114-7017262,7017346-7017489,701... 29 2.5
06_03_1041 - 27086661-27086981,27087089-27087295,27087398-270876... 29 3.3
02_05_1247 + 35233756-35233785,35234902-35236107 29 3.3
02_01_0547 + 4032161-4032418,4032747-4032953,4033216-4033569 29 3.3
12_01_0964 + 9685989-9686459 29 4.3
08_02_1445 + 27149983-27150382,27151203-27151612,27151955-27152818 29 4.3
09_02_0257 + 6355876-6356444,6356690-6357136,6357231-6359166 28 7.5
03_01_0581 + 4310136-4310186,4310940-4311144,4311245-4311410,431... 28 7.5
02_03_0320 + 17677809-17677929,17678203-17678289,17678657-176787... 28 7.5
09_04_0753 + 19942397-19942805,19943457-19943866,19944252-19945121 27 9.9
>05_06_0242 + 26638401-26638781
Length = 126
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +2
Query: 248 QRLHVHMVTGGSESDAQNKMRENFKMMWEQHPNFGRNSILWE 373
+RLHVH + E D + +R +++WEQ P+ +S L E
Sbjct: 55 ERLHVHF-SQRCEDDDEMAVRRKLEIVWEQEPSRALHSHLEE 95
>12_01_0772 -
7016864-7017012,7017114-7017262,7017346-7017489,
7017549-7017719,7017907-7018020,7018115-7018215,
7018296-7018416,7018601-7018830,7019203-7019265,
7019528-7019570,7019860-7019953,7020428-7020501,
7020616-7020744,7020940-7021017,7021353-7021639
Length = 648
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 317 FKMMWEQHPNFGRNSILWEEWWRQVVKLTLQDHLPEGADTRSL 445
F + W + N G + +L +W RQ + LQ+ L E A++ L
Sbjct: 134 FGLRWPRCDNAGHDGLLTVDWQRQYWEKHLQECLDEAAESALL 176
>06_03_1041 -
27086661-27086981,27087089-27087295,27087398-27087675,
27088360-27088471
Length = 305
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 178 IRLVTFDATNTLLKFKMVPSQYYTKIARTYG 270
+RL+T D T TLL +K YY A+ G
Sbjct: 51 LRLITVDVTGTLLAYKGQLGDYYCMAAKAAG 81
>02_05_1247 + 35233756-35233785,35234902-35236107
Length = 411
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 183 VSHFRCDEHPIKIQNGTLAILHKDCTYIWLQGEAKVML 296
+S F+ +E +++ L + H DC WLQG A L
Sbjct: 237 ISEFQ-EEERVRLLPSCLHVFHVDCIDTWLQGNANCPL 273
>02_01_0547 + 4032161-4032418,4032747-4032953,4033216-4033569
Length = 272
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 178 IRLVTFDATNTLLKFKMVPSQYYTKIARTYG 270
+RLVT D T TL+ +K YY A++ G
Sbjct: 7 LRLVTVDVTGTLIAYKGQLGDYYCMAAKSAG 37
>12_01_0964 + 9685989-9686459
Length = 156
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -3
Query: 322 FKVFPHLILSITFASPCNHMYVQSLCNIARVPF 224
+++ PHL+L SPC +V+ C+ +PF
Sbjct: 31 YQLQPHLMLQQQMLSPCGE-FVRQQCSTVEIPF 62
>08_02_1445 + 27149983-27150382,27151203-27151612,27151955-27152818
Length = 557
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1
Query: 498 AATSQHLEVLKSLIKVFPKLLVSAPS 421
AA HLEVLK L++ FP L ++ S
Sbjct: 127 AAKQGHLEVLKELLQAFPALAMTTNS 152
>09_02_0257 + 6355876-6356444,6356690-6357136,6357231-6359166
Length = 983
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 505 RYIAANNKKEGDSYRSDFEFRPSSLRYSSKFR 600
RYI +K+ D ++SD+ + PS + +S FR
Sbjct: 146 RYIPCVLRKKWDDWKSDWFYTPSPTKRASDFR 177
>03_01_0581 +
4310136-4310186,4310940-4311144,4311245-4311410,
4312035-4312257,4312891-4312967,4313091-4313278,
4313363-4313457,4313674-4313807,4313914-4314024,
4314304-4314619,4314919-4315040,4315183-4315293,
4315824-4316012,4316105-4316263,4316449-4316530,
4317080-4317190
Length = 779
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 317 FKMMWEQHPNFGRNSILWEEWWRQVVKLTLQD 412
+K+ +QH N GR L EE R +K +L D
Sbjct: 578 WKLDSDQHYNIGRQGTLTEETGRSFIKRSLSD 609
>02_03_0320 +
17677809-17677929,17678203-17678289,17678657-17678763,
17679903-17679981,17680574-17680754,17681290-17681411,
17681541-17681677
Length = 277
Score = 27.9 bits (59), Expect = 7.5
Identities = 21/80 (26%), Positives = 36/80 (45%)
Frame = +2
Query: 197 MRRTPY*NSKWYPRNITQRLHVHMVTGGSESDAQNKMRENFKMMWEQHPNFGRNSILWEE 376
MR + N KW + +H+ T G++ +A ++ + M + PNF L EE
Sbjct: 154 MRGVYFKNMKWQAAIKVDKKQIHLGTVGTQEEAA-RLYDRAAFMCGREPNFE----LSEE 208
Query: 377 WWRQVVKLTLQDHLPEGADT 436
+++ T +D L DT
Sbjct: 209 EKKELQNYTWKDFLDMTRDT 228
>09_04_0753 + 19942397-19942805,19943457-19943866,19944252-19945121
Length = 562
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 498 AATSQHLEVLKSLIKVFPKLLVSAPS 421
AA HL+VLK L++ FP L ++ S
Sbjct: 130 AAKQGHLDVLKELLQAFPALAMTTNS 155
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,269,738
Number of Sequences: 37544
Number of extensions: 321434
Number of successful extensions: 751
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 751
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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