Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_E14
(486 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161 65 2e-11
01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129 52 2e-07
02_04_0074 - 19474786-19474812,19475174-19475400,19476362-194764... 52 2e-07
07_01_1001 - 8460467-8460799 45 3e-05
07_03_0321 + 16757414-16757743 44 5e-05
01_06_0098 - 26416768-26416998 32 0.28
03_06_0485 + 34242121-34243188 29 2.0
03_06_0533 + 34565062-34565439 28 3.5
07_03_1321 - 25794146-25794904 28 4.6
02_01_0545 + 3996568-3996645,3998061-3998168,3998409-3998493,399... 28 4.6
10_08_0425 - 17806117-17806401,17806862-17806984,17807076-178072... 27 6.0
05_04_0338 - 20392482-20392832,20393236-20393305,20393571-203937... 27 6.0
12_02_1217 + 27082452-27083593,27085041-27085158 27 8.0
07_03_1479 - 26832976-26833095,26833737-26833943,26834104-268342... 27 8.0
>05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161
Length = 113
Score = 65.3 bits (152), Expect = 2e-11
Identities = 28/55 (50%), Positives = 44/55 (80%)
Frame = +3
Query: 99 YLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLICXPRDR 263
YLLAVLGG T+P+A D++ IL SVG+EA+ E+L+ +++EL GKD+ ++I R++
Sbjct: 7 YLLAVLGGNTSPSADDIKNILESVGVEANDERLEFLLSELEGKDITEVIAAGREK 61
>01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129
Length = 114
Score = 52.4 bits (120), Expect = 2e-07
Identities = 22/55 (40%), Positives = 38/55 (69%)
Frame = +3
Query: 99 YLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLICXPRDR 263
YL+A L G ++P A D+ IL SVG E D K++ ++++++GKD+ +LI R++
Sbjct: 7 YLMAYLAGNSSPTAEDLTTILESVGCEIDNAKMELLLSQVSGKDITELIACGREK 61
>02_04_0074 -
19474786-19474812,19475174-19475400,19476362-19476496,
19478662-19479193
Length = 306
Score = 52.0 bits (119), Expect = 2e-07
Identities = 23/55 (41%), Positives = 36/55 (65%)
Frame = +3
Query: 99 YLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLICXPRDR 263
YLLA L G P+A D+ IL SVG E D K++ ++++L GKD+ ++I R++
Sbjct: 200 YLLATLAGNPNPSAEDLTTILESVGAEVDHGKMELLLSQLAGKDITEIIASGREK 254
>07_01_1001 - 8460467-8460799
Length = 110
Score = 45.2 bits (102), Expect = 3e-05
Identities = 18/49 (36%), Positives = 31/49 (63%)
Frame = +3
Query: 99 YLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLI 245
YL+A +GG +P DV IL +VG + D +KL + ++ GKD+ +++
Sbjct: 7 YLMATIGGNASPTKDDVRAILGAVGADVDEDKLGYLFDQVAGKDLSEIL 55
>07_03_0321 + 16757414-16757743
Length = 109
Score = 44.4 bits (100), Expect = 5e-05
Identities = 18/49 (36%), Positives = 31/49 (63%)
Frame = +3
Query: 99 YLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLI 245
YL+A +GG +P DV IL +VG + D +KL + ++ GKD+ +++
Sbjct: 7 YLMATIGGNASPTKDDVRAILGAVGADIDEDKLGYLFDQVAGKDLAEIL 55
>01_06_0098 - 26416768-26416998
Length = 76
Score = 31.9 bits (69), Expect = 0.28
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 132 PAAADVEKILSSVGIEADAEKLKKVITELNGKD 230
P V KI+ +V IEAD+ + K ++ L GKD
Sbjct: 16 PPPPAVVKIIETVHIEADSAEFKSIVQRLTGKD 48
>03_06_0485 + 34242121-34243188
Length = 355
Score = 29.1 bits (62), Expect = 2.0
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = -3
Query: 262 RSRGXQISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTASKYRGHVT 83
R++ + S STS S+ T + S+++S T S++AAA ++PP + +
Sbjct: 113 RTKSSKSSSSTSAAGSASATGGTSSSTSSTATGGS--SSAAAAAAMMPPQAQLPFLASLH 170
Query: 82 HFLSPN*HETCNAERITF 29
H L H + A R+ F
Sbjct: 171 HPLGGGDHYSSGASRLGF 188
>03_06_0533 + 34565062-34565439
Length = 125
Score = 28.3 bits (60), Expect = 3.5
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +1
Query: 13 RFVQRRTLFFRHYTFRVN*DLKNALRGRDIYWLCWVARPRQLPLTLRRSSA 165
R V+RR LF R Y F + +L R R + W+ R LRR A
Sbjct: 28 RQVERRQLFLRSYHFSRDVELSPRARARRVVWVGLRRLRRAAATGLRRLRA 78
>07_03_1321 - 25794146-25794904
Length = 252
Score = 27.9 bits (59), Expect = 4.6
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = -3
Query: 235 STSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTASKYRGHVTHFLS 71
++S P ++ T L A A + + R +T+AAA PPS+ S G + L+
Sbjct: 161 ASSSPATNTTTSLVLDALAML-AKSRAIATAAAAAAAAPPSSGSDLYGGYGNMLA 214
>02_01_0545 +
3996568-3996645,3998061-3998168,3998409-3998493,
3998789-3999024,3999250-3999423,3999510-3999557,
3999659-3999718,3999815-3999901,4000007-4000095,
4000209-4000300,4001110-4001171,4001271-4001420,
4001507-4001722
Length = 494
Score = 27.9 bits (59), Expect = 4.6
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 84 VTWPRYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKV 206
+TW +LLA K A A+V+ +LS+ I D +LKK+
Sbjct: 283 LTWSVFLLAQNPSKMRKAQAEVDSVLSNETINVD--QLKKL 321
>10_08_0425 -
17806117-17806401,17806862-17806984,17807076-17807222,
17807307-17807450,17808557-17808668,17808762-17808898,
17809016-17809156,17810921-17811004,17811275-17811742,
17811858-17811936,17812494-17812506,17813884-17814460,
17814502-17814774,17814899-17815045,17815354-17815413,
17816124-17816510
Length = 1058
Score = 27.5 bits (58), Expect = 6.0
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = -3
Query: 229 SLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTASKYRGHVTHFLSPN*HE 56
SLPL + S SA I +L+ S+ + PS+AS+ G T +P H+
Sbjct: 569 SLPLRQTVAPASSSALDLIKKKLQDAGASSVPSPLATPSSASELNGSKTTDAAPMGHQ 626
>05_04_0338 -
20392482-20392832,20393236-20393305,20393571-20393790,
20394249-20394342,20394754-20394865,20395081-20395487
Length = 417
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -2
Query: 284 GIDDSFSPVPGPANKLFNILAVELSDYFLKLL 189
G D F+P+ GP + F+ L EL + L +L
Sbjct: 346 GDRDPFTPIDGPVGRYFSALPSELPNVTLHML 377
>12_02_1217 + 27082452-27083593,27085041-27085158
Length = 419
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 99 YLLAVLGGKTTPAAADVEKILSSVGIEADAEKL 197
Y+LA+ TPA +D E+ VG +AD + L
Sbjct: 27 YVLALSSSCNTPACSDEEEEDDEVGSDADGDDL 59
>07_03_1479 - 26832976-26833095,26833737-26833943,26834104-26834252,
26834330-26834732,26834840-26835118,26835285-26835716,
26836362-26836838,26837171-26837212,26837285-26837545,
26837637-26838938,26839146-26839575,26839643-26840046,
26840360-26840716,26840842-26841102,26841494-26842141,
26842231-26842452,26842547-26842768,26842860-26843009,
26843739-26844111,26844467-26844689,26845167-26845425,
26845585-26845920,26846013-26846999,26848395-26849624,
26849706-26849768,26849858-26849910,26849998-26850079,
26850520-26850588,26851070-26851129,26851205-26851267,
26851993-26852101,26852742-26852827,26853120-26853847,
26854613-26854676
Length = 3716
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -2
Query: 266 SPVPGPANKLFNILAVELSDYFLKLLS 186
SP P K N AVE DYFL LS
Sbjct: 1438 SPYRAPLAKFLNRYAVEAVDYFLARLS 1464
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,987,851
Number of Sequences: 37544
Number of extensions: 159283
Number of successful extensions: 533
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 533
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 999806640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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