Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_E08
         (505 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14968-1|AAA85656.1|  148|Homo sapiens ribosomal protein L27a pr...   155   1e-37
BC020169-1|AAH20169.1|  147|Homo sapiens Unknown (protein for IM...   155   1e-37
BC005326-1|AAH05326.1|  148|Homo sapiens ribosomal protein L27a ...   155   1e-37
AB020236-1|BAA77361.1|  148|Homo sapiens ribosomal protein L27A ...   155   1e-37
BC066326-1|AAH66326.1|  148|Homo sapiens ribosomal protein L27a ...   149   7e-36
AJ400879-2|CAC35388.1|  106|Homo sapiens ribosomal protein L27a ...   133   3e-31
AB007178-1|BAA25837.1|   34|Homo sapiens ribosomal protein L27a ...    46   1e-04
AY358091-1|AAQ88458.1|  126|Homo sapiens VFLL3057 protein.             29   7.0  
AK126225-1|BAC86496.1|  139|Homo sapiens protein ( Homo sapiens ...    29   9.2  

>U14968-1|AAA85656.1|  148|Homo sapiens ribosomal protein L27a
           protein.
          Length = 148

 Score =  155 bits (375), Expect = 1e-37
 Identities = 72/147 (48%), Positives = 88/147 (59%)
 Frame = +1

Query: 40  PPSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNF 219
           P   +KTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GM+++
Sbjct: 2   PSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHY 61

Query: 220 HFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQP 399
           H ++N++FCP +NLDKLWTLVSEQTR+  A    G  P+I++V++           PKQP
Sbjct: 62  HLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQP 121

Query: 400 VIVXXXXXXXXXXXXXXDVGGACVLSA 480
           VIV               VGGACVL A
Sbjct: 122 VIVKAKFFSRRAEEKIKSVGGACVLVA 148


>BC020169-1|AAH20169.1|  147|Homo sapiens Unknown (protein for
           IMAGE:3543815) protein.
          Length = 147

 Score =  155 bits (375), Expect = 1e-37
 Identities = 72/147 (48%), Positives = 88/147 (59%)
 Frame = +1

Query: 40  PPSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNF 219
           P   +KTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GM+++
Sbjct: 1   PSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHY 60

Query: 220 HFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQP 399
           H ++N++FCP +NLDKLWTLVSEQTR+  A    G  P+I++V++           PKQP
Sbjct: 61  HLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQP 120

Query: 400 VIVXXXXXXXXXXXXXXDVGGACVLSA 480
           VIV               VGGACVL A
Sbjct: 121 VIVKAKFFSRRAEEKIKSVGGACVLVA 147


>BC005326-1|AAH05326.1|  148|Homo sapiens ribosomal protein L27a
           protein.
          Length = 148

 Score =  155 bits (375), Expect = 1e-37
 Identities = 72/147 (48%), Positives = 88/147 (59%)
 Frame = +1

Query: 40  PPSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNF 219
           P   +KTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GM+++
Sbjct: 2   PSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHY 61

Query: 220 HFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQP 399
           H ++N++FCP +NLDKLWTLVSEQTR+  A    G  P+I++V++           PKQP
Sbjct: 62  HLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQP 121

Query: 400 VIVXXXXXXXXXXXXXXDVGGACVLSA 480
           VIV               VGGACVL A
Sbjct: 122 VIVKAKFFSRRAEEKIKSVGGACVLVA 148


>AB020236-1|BAA77361.1|  148|Homo sapiens ribosomal protein L27A
           protein.
          Length = 148

 Score =  155 bits (375), Expect = 1e-37
 Identities = 72/147 (48%), Positives = 88/147 (59%)
 Frame = +1

Query: 40  PPSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNF 219
           P   +KTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GM+++
Sbjct: 2   PSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHY 61

Query: 220 HFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQP 399
           H ++N++FCP +NLDKLWTLVSEQTR+  A    G  P+I++V++           PKQP
Sbjct: 62  HLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQP 121

Query: 400 VIVXXXXXXXXXXXXXXDVGGACVLSA 480
           VIV               VGGACVL A
Sbjct: 122 VIVKAKFFSRRAEEKIKSVGGACVLVA 148


>BC066326-1|AAH66326.1|  148|Homo sapiens ribosomal protein L27a
           protein.
          Length = 148

 Score =  149 bits (360), Expect = 7e-36
 Identities = 70/147 (47%), Positives = 87/147 (59%)
 Frame = +1

Query: 40  PPSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNF 219
           P   +KTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GM+++
Sbjct: 2   PSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHY 61

Query: 220 HFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQP 399
           + ++N++FCP +NLDKLWTLVSEQTR+  A    G  P+I++V++            KQP
Sbjct: 62  NLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLAKQP 121

Query: 400 VIVXXXXXXXXXXXXXXDVGGACVLSA 480
           VIV               VGGACVL A
Sbjct: 122 VIVKAKLFSRRAEEKIKSVGGACVLVA 148


>AJ400879-2|CAC35388.1|  106|Homo sapiens ribosomal protein L27a
           protein.
          Length = 106

 Score =  133 bits (322), Expect = 3e-31
 Identities = 57/105 (54%), Positives = 73/105 (69%)
 Frame = +1

Query: 40  PPSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNF 219
           P   +KTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GM+++
Sbjct: 2   PSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHY 61

Query: 220 HFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKA 354
           H ++N++FCP +NLDKLWTLVSEQTR+  A    G  P+I++V++
Sbjct: 62  HLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRS 106


>AB007178-1|BAA25837.1|   34|Homo sapiens ribosomal protein L27a
           protein.
          Length = 34

 Score = 45.6 bits (103), Expect = 1e-04
 Identities = 19/34 (55%), Positives = 26/34 (76%)
 Frame = +1

Query: 253 LNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKA 354
           +NLDKLWTLVSEQTR+  A    G  P+I++V++
Sbjct: 1   VNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRS 34


>AY358091-1|AAQ88458.1|  126|Homo sapiens VFLL3057 protein.
          Length = 126

 Score = 29.5 bits (63), Expect = 7.0
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
 Frame = -3

Query: 206 PSLPKYPGWYLSMLIL*WCSPPALPRPPGCLRCFPIRPCP---*LT*PLSFLVF 54
           P+LPK+PG  ++ L   W S    P P G +    + PCP       PL FLV+
Sbjct: 55  PALPKWPGHLMAELQGPWLSLAHCPSPSGPI----VLPCPFRVQFEPPLQFLVW 104


>AK126225-1|BAC86496.1|  139|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44237 fis, clone THYMU3007845. ).
          Length = 139

 Score = 29.1 bits (62), Expect = 9.2
 Identities = 12/43 (27%), Positives = 15/43 (34%)
 Frame = +3

Query: 351 SWILQVARQRQTPQTTCHSKSKVLLKISREENQGCGWCLCTIC 479
           +W L      Q PQ        + L   R   + C WC C  C
Sbjct: 71  AWFLSPVHHSQIPQLAACPLQSLRLSKPRSPGRCCAWCGCLNC 113


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,390,587
Number of Sequences: 237096
Number of extensions: 1429426
Number of successful extensions: 3110
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3103
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4649883964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)