Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_E07
(652 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_04_0391 + 17127309-17127449,17127886-17127950,17129209-171293... 37 0.016
02_02_0286 - 8589736-8590857 30 1.4
02_05_0473 + 29319824-29322511,29322659-29322820,29324133-293242... 30 1.8
08_01_0469 - 4127950-4127988,4127989-4128264,4128845-4130861,413... 29 4.2
01_03_0231 + 14014243-14014390,14015053-14015141,14017859-140179... 29 4.2
06_01_0099 + 824557-825532,826090-826245,826422-828064 28 5.6
02_05_0847 + 32183249-32183486,32184001-32184118,32184231-321843... 28 5.6
02_01_0113 - 854108-854302,854399-854542,854658-854893,855036-85... 28 5.6
12_01_0919 - 9086879-9087064,9087842-9087923,9088357-9089553,908... 28 7.4
05_06_0033 + 25074301-25074393,25074680-25075203,25076367-250764... 28 7.4
01_01_0588 + 4372877-4372949,4374328-4376262,4376940-4377015,437... 28 7.4
02_05_0549 + 29900714-29900953,29902224-29902323,29902578-299027... 27 9.8
>11_04_0391 +
17127309-17127449,17127886-17127950,17129209-17129305,
17129729-17130193,17130505-17130528
Length = 263
Score = 36.7 bits (81), Expect = 0.016
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +2
Query: 359 ENHDSYFAVMAEKKPSYCCYIEECKQKFNNTADRLDHCVREHRIPKDFRFERQKK 523
EN + ++ SY C +E C K + R H + +H+ PK F F ++ +
Sbjct: 86 ENFEDHYRTRHTASCSYECLVEGCGVKLKSYKSRQQHLLDKHQFPKSFEFFKKAR 140
Score = 31.1 bits (67), Expect = 0.80
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 221 CSIPGCKHIADTLLDYENHYNATHRYSCA 307
C I GC D L ++E+HY H SC+
Sbjct: 73 CPISGCGAHLDCLENFEDHYRTRHTASCS 101
>02_02_0286 - 8589736-8590857
Length = 373
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 209 KQTPCSIPGCKHIADTLLDYENHYNATHRYSCAQCKK 319
K +PC P C I Y N+ A RY C +C++
Sbjct: 42 KSSPCC-PRCNSIKTKFCYYNNYSMAQPRYFCRECRR 77
>02_05_0473 +
29319824-29322511,29322659-29322820,29324133-29324249,
29324360-29324469,29324504-29324540,29324696-29324862,
29325002-29325089,29325163-29325270
Length = 1158
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/63 (28%), Positives = 25/63 (39%)
Frame = +2
Query: 296 YSCAQCKKVLPSPHFLDLHIQENHDSYFAVMAEKKPSYCCYIEECKQKFNNTADRLDHCV 475
YSCA C + L+ H+QE H + + + S C F NT H V
Sbjct: 497 YSCAVCMDSFTNRRVLERHVQEKHGAQYL-----QYSTLLRCISCNSNFLNTDLLWQHIV 551
Query: 476 REH 484
+H
Sbjct: 552 SDH 554
>08_01_0469 -
4127950-4127988,4127989-4128264,4128845-4130861,
4131134-4131987
Length = 1061
Score = 28.7 bits (61), Expect = 4.2
Identities = 8/21 (38%), Positives = 16/21 (76%)
Frame = +2
Query: 137 FIHDKQPTRLGIYDVDDGNYN 199
F+H+KQ +LG+++ +G +N
Sbjct: 460 FVHEKQAAKLGLFETGEGYFN 480
>01_03_0231 +
14014243-14014390,14015053-14015141,14017859-14017949,
14018088-14018215,14018703-14018784,14019022-14019081,
14019160-14019251,14019342-14019462,14019873-14019928,
14020193-14020272,14020774-14020820,14020940-14020989,
14021304-14021366,14021515-14021595,14021703-14021717,
14021875-14021985,14022072-14022147,14022350-14022492,
14022721-14022794,14023364-14023454,14023589-14023687
Length = 598
Score = 28.7 bits (61), Expect = 4.2
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 374 YFAVMAEKKPSYCCYIEECK 433
YFA M K +YCC E CK
Sbjct: 484 YFADMFSKSANYCCASEACK 503
>06_01_0099 + 824557-825532,826090-826245,826422-828064
Length = 924
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +2
Query: 179 VDDGNYNTQFKQTPCSIPGCKHIADTLLDYENHYNATHRYSCAQCKKVLPSP 334
+DD K P S+P C+++ L + N ++ HR + A LP P
Sbjct: 374 MDDEVSYAAHKSQPVSVPTCQYLCFDFLTHPNSFSPHHR-APAMAPYPLPPP 424
>02_05_0847 +
32183249-32183486,32184001-32184118,32184231-32184376,
32184591-32186080
Length = 663
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +2
Query: 353 IQENHDSYFAVMAEKKPSYCCYIEECKQKFNNTADRLDHCVREHRI 490
+ +++Y A + EK E KF N D+L C+RE R+
Sbjct: 448 VSRYYEAYLARVDEKIGFQIRIFPEKPIKFENMYDQLTRCIREQRL 493
>02_01_0113 -
854108-854302,854399-854542,854658-854893,855036-855315,
856891-857031,857259-857372
Length = 369
Score = 28.3 bits (60), Expect = 5.6
Identities = 23/107 (21%), Positives = 43/107 (40%)
Frame = +2
Query: 182 DDGNYNTQFKQTPCSIPGCKHIADTLLDYENHYNATHRYSCAQCKKVLPSPHFLDLHIQE 361
++ + + + C PGC + H A H+Y QC + H L +I+
Sbjct: 175 EESHVKLDYVEVVCCEPGCMKTFTNVECLRAHNQACHQY--VQC-DICGEKH-LKKNIKR 230
Query: 362 NHDSYFAVMAEKKPSYCCYIEECKQKFNNTADRLDHCVREHRIPKDF 502
+ ++ V + ++ C E C+ F+N ++ H H K F
Sbjct: 231 HLRAHEEVPSTERIK--CSFEGCECSFSNKSNLTKHIKASHDQVKPF 275
>12_01_0919 -
9086879-9087064,9087842-9087923,9088357-9089553,
9089598-9089961,9090086-9090188,9090234-9090479
Length = 725
Score = 27.9 bits (59), Expect = 7.4
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -2
Query: 69 FIFFGCQPFWNQLNFRRRQW 10
F+ GC PFW N QW
Sbjct: 201 FVKTGCTPFWTYANITPNQW 220
>05_06_0033 +
25074301-25074393,25074680-25075203,25076367-25076442,
25076549-25076641,25077167-25077253,25077338-25078095,
25078447-25078575,25079145-25079265
Length = 626
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/48 (25%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +2
Query: 185 DGNYNTQFKQTPCSIPGCKHIADTLLDY--ENHYNATHRYSCAQCKKV 322
+ N + +PG +AD L + +++YSC +CKK+
Sbjct: 163 ESNKTDEIMDISLDLPGSNSVADALARFFQPEILEGSNKYSCERCKKL 210
>01_01_0588 + 4372877-4372949,4374328-4376262,4376940-4377015,
4378900-4378970,4379038-4379144,4379241-4379711,
4379791-4379976,4380132-4380425,4380820-4381434,
4382219-4382615,4382768-4382850,4383397-4383567,
4384046-4384243,4384754-4385314,4385401-4385460,
4385553-4385869,4385980-4386403,4386539-4387006,
4387093-4387209,4387306-4387427,4387506-4388247,
4388453-4388485,4388625-4388879,4388975-4389160,
4390115-4390453,4391293-4392045
Length = 3017
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 211 FKLGVIISIVHIVNSKSSWLFIMYKQNIMKH 119
F++ VI S+ H + S L ++YK MKH
Sbjct: 2746 FRMAVITSLKHFIPSDDDALSLVYKHFDMKH 2776
>02_05_0549 +
29900714-29900953,29902224-29902323,29902578-29902719,
29902720-29902826,29903179-29903480
Length = 296
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +2
Query: 188 GNYNTQFKQTPCSIPGCKHIADTLLDYENHYNATHRYSCAQCKKVL 325
G+YN + HI +T+ D +N Y + Y C Q ++ L
Sbjct: 59 GSYNNASRSEVLKTLSITHILNTVPDCQNLYRNSFTYHCIQDERSL 104
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,174,626
Number of Sequences: 37544
Number of extensions: 362149
Number of successful extensions: 977
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 975
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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