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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_E07
         (652 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U12964-6|AAM29681.1|  329|Caenorhabditis elegans Hypothetical pr...    33   0.13 
AL132902-14|CAE18021.2|  758|Caenorhabditis elegans Hypothetical...    32   0.31 
Z79603-2|CAB01893.4|  500|Caenorhabditis elegans Hypothetical pr...    31   0.54 
Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical pr...    31   0.71 
M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger pro...    31   0.71 
Z77667-6|CAB01235.2|  870|Caenorhabditis elegans Hypothetical pr...    31   0.94 
AF416567-1|AAL27004.1|  870|Caenorhabditis elegans nuclear zinc ...    31   0.94 
Z82074-1|CAB04928.2|  480|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z69659-1|CAA93483.1|  329|Caenorhabditis elegans Hypothetical pr...    30   1.6  
AL132864-6|CAB63395.1|  480|Caenorhabditis elegans Hypothetical ...    30   1.6  
U40939-3|ABD63235.1|  960|Caenorhabditis elegans Hunchback like ...    29   2.2  
U40939-2|AAA81701.3|  982|Caenorhabditis elegans Hunchback like ...    29   2.2  
M93256-1|AAB59181.1| 1110|Caenorhabditis elegans tra-1 protein.        29   2.2  
AL117202-5|CAB61040.2| 1109|Caenorhabditis elegans Hypothetical ...    29   2.2  
AF097737-1|AAD16170.1|  982|Caenorhabditis elegans hunchback-rel...    29   2.2  
U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical pr...    29   2.9  
U61949-4|AAB03150.2|  414|Caenorhabditis elegans Hypothetical pr...    28   5.0  
U39997-9|AAA81101.2|  468|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z81547-1|CAB04459.1|  354|Caenorhabditis elegans Hypothetical pr...    28   6.6  
AL132904-7|CAC35838.1|  430|Caenorhabditis elegans Hypothetical ...    28   6.6  
Z81542-1|CAB04414.1|  379|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z81534-5|CAB04348.2|  694|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z81515-3|CAC42289.2| 1693|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z81515-2|CAB04197.2| 1691|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z81129-4|CAB03405.1|  330|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z47074-2|CAA87377.2|  694|Caenorhabditis elegans Hypothetical pr...    27   8.7  
U22832-3|AAA64508.2|  359|Caenorhabditis elegans Hypothetical pr...    27   8.7  
AL132904-23|CAC35839.2|  312|Caenorhabditis elegans Hypothetical...    27   8.7  

>U12964-6|AAM29681.1|  329|Caenorhabditis elegans Hypothetical
           protein F26F4.8 protein.
          Length = 329

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 6/41 (14%)
 Frame = +2

Query: 218 PCSIPGCKHIADTLLDYENHYNATHRYS------CAQCKKV 322
           PC   GC  + +T+L+ ENH N  H  +      C  C +V
Sbjct: 107 PCRAEGCDQLVETMLEGENHANTAHHVNGTVSIKCKDCSEV 147


>AL132902-14|CAE18021.2|  758|Caenorhabditis elegans Hypothetical
           protein Y71A12B.15 protein.
          Length = 758

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 17/54 (31%), Positives = 27/54 (50%)
 Frame = +2

Query: 242 HIADTLLDYENHYNATHRYSCAQCKKVLPSPHFLDLHIQENHDSYFAVMAEKKP 403
           ++ D   D+ ++Y  T RY  A C+KVLP   FLD       +  +  +A+  P
Sbjct: 237 NVLDVSRDWPDNYRQTIRYFLA-CEKVLPELKFLDCSSAYLDEDLYKELAQSHP 289


>Z79603-2|CAB01893.4|  500|Caenorhabditis elegans Hypothetical
           protein M163.2 protein.
          Length = 500

 Score = 31.5 bits (68), Expect = 0.54
 Identities = 24/100 (24%), Positives = 37/100 (37%)
 Frame = +2

Query: 203 QFKQTPCSIPGCKHIADTLLDYENHYNATHRYSCAQCKKVLPSPHFLDLHIQENHDSYFA 382
           Q  +  C    C+       ++  H   TH      C +V P  +       EN  ++  
Sbjct: 257 QKNEVNCKWRYCERSFKQTYEFTAH-KRTHTKQKLYCCEVCPKRYGR----LENLKTHRR 311

Query: 383 VMAEKKPSYCCYIEECKQKFNNTADRLDHCVREHRIPKDF 502
               +KP Y C +  C + F N +DR  H  R H   K +
Sbjct: 312 THTGEKP-YHCNVPNCNKSFTNASDRSKHSKRTHSNEKPY 350



 Score = 29.1 bits (62), Expect = 2.9
 Identities = 20/75 (26%), Positives = 28/75 (37%), Gaps = 7/75 (9%)
 Frame = +2

Query: 197 NTQFKQTPCSIPGCKHIADTLLDYENHYNATHR----YSC--AQCKKVLPSPHFLDLHIQ 358
           +T  K   C++P C        D   H   TH     Y C    C      P  L  H++
Sbjct: 313 HTGEKPYHCNVPNCNKSFTNASDRSKHSKRTHSNEKPYCCDFGSCACAYTDPSSLRKHVK 372

Query: 359 ENHDSYFAV-MAEKK 400
             H  + A+ MA +K
Sbjct: 373 SKHPEHHAMKMAMRK 387


>Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical protein
            C25D7.3 protein.
          Length = 2150

 Score = 31.1 bits (67), Expect = 0.71
 Identities = 15/80 (18%), Positives = 32/80 (40%)
 Frame = +2

Query: 263  DYENHYNATHRYSCAQCKKVLPSPHFLDLHIQENHDSYFAVMAEKKPSYCCYIEECKQKF 442
            D +   + +H++ C QC     S +F    + E H      + E  P      ++C +  
Sbjct: 2067 DVQGQVSESHKHKCVQCSIRNQSVYFSSYSLLELHGKLHQNLHELAPEDADDCQDCYETL 2126

Query: 443  NNTADRLDHCVREHRIPKDF 502
             ++ + + H +  H   + F
Sbjct: 2127 TSSFEVIVHRINHHHSRRCF 2146


>M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger protein
            protein.
          Length = 2150

 Score = 31.1 bits (67), Expect = 0.71
 Identities = 15/80 (18%), Positives = 32/80 (40%)
 Frame = +2

Query: 263  DYENHYNATHRYSCAQCKKVLPSPHFLDLHIQENHDSYFAVMAEKKPSYCCYIEECKQKF 442
            D +   + +H++ C QC     S +F    + E H      + E  P      ++C +  
Sbjct: 2067 DVQGQVSESHKHKCVQCSIRNQSVYFSSYSLLELHGKLHQNLHELAPEDADDCQDCYETL 2126

Query: 443  NNTADRLDHCVREHRIPKDF 502
             ++ + + H +  H   + F
Sbjct: 2127 TSSFEVIVHRINHHHSRRCF 2146


>Z77667-6|CAB01235.2|  870|Caenorhabditis elegans Hypothetical
           protein M04B2.1 protein.
          Length = 870

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 20/67 (29%), Positives = 28/67 (41%)
 Frame = +2

Query: 269 ENHYNATHRYSCAQCKKVLPSPHFLDLHIQENHDSYFAVMAEKKPSYCCYIEECKQKFNN 448
           EN +    ++ C  CK+   S   +  H  E H    A   EK+  Y C I  C++ FN 
Sbjct: 441 ENLHFTGSKFQCTMCKETDTSEQRMKDHYFETH-LVIAKSEEKESKYPCAI--CEEDFNF 497

Query: 449 TADRLDH 469
              R  H
Sbjct: 498 KGVREQH 504


>AF416567-1|AAL27004.1|  870|Caenorhabditis elegans nuclear zinc
           finger protein protein.
          Length = 870

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 20/67 (29%), Positives = 28/67 (41%)
 Frame = +2

Query: 269 ENHYNATHRYSCAQCKKVLPSPHFLDLHIQENHDSYFAVMAEKKPSYCCYIEECKQKFNN 448
           EN +    ++ C  CK+   S   +  H  E H    A   EK+  Y C I  C++ FN 
Sbjct: 441 ENLHFTGSKFQCTMCKETDTSEQRMKDHYFETH-LVIAKSEEKESKYPCAI--CEEDFNF 497

Query: 449 TADRLDH 469
              R  H
Sbjct: 498 KGVREQH 504


>Z82074-1|CAB04928.2|  480|Caenorhabditis elegans Hypothetical
           protein W06H12.1 protein.
          Length = 480

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
 Frame = +2

Query: 221 CSIPGCKHIADTLLDYENHYNATH---RYSCAQCKKVLPSPHFLDLH--IQENHDSY 376
           C + GC  +         H+  TH   R++C +CK      H L LH  I  N D+Y
Sbjct: 361 CPMDGCNKVFKEKGSVHRHF-VTHIGMRFNCDKCKASYTQKHALMLHQKIHANPDAY 416


>Z69659-1|CAA93483.1|  329|Caenorhabditis elegans Hypothetical
           protein F07C6.1 protein.
          Length = 329

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 18/35 (51%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
 Frame = +2

Query: 236 CKHIADT--LLDY-ENHYNATHRYSCAQCKKVLPS 331
           CK   D   LL Y EN Y+A H + C  CKKVL S
Sbjct: 146 CKQHVDNSDLLTYQENPYHAYH-FKCTTCKKVLES 179


>AL132864-6|CAB63395.1|  480|Caenorhabditis elegans Hypothetical
           protein W06H12.1 protein.
          Length = 480

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
 Frame = +2

Query: 221 CSIPGCKHIADTLLDYENHYNATH---RYSCAQCKKVLPSPHFLDLH--IQENHDSY 376
           C + GC  +         H+  TH   R++C +CK      H L LH  I  N D+Y
Sbjct: 361 CPMDGCNKVFKEKGSVHRHF-VTHIGMRFNCDKCKASYTQKHALMLHQKIHANPDAY 416


>U40939-3|ABD63235.1|  960|Caenorhabditis elegans Hunchback like
           (fly gap gene related)protein 1, isoform b protein.
          Length = 960

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
 Frame = +2

Query: 200 TQFKQTPCSI-PGCKHIADTLLDYENHYNATHRYSCAQCKKVLPSPHFLDLHIQENH 367
           TQ  QTP  + P C  +  +   + +H N    + C+ C     +   L  H++E+H
Sbjct: 306 TQNGQTPMLVCPICGFMCPSKFHFNSHMNTHGDHQCSMCDYTSRTEGRLKKHMRESH 362


>U40939-2|AAA81701.3|  982|Caenorhabditis elegans Hunchback like
           (fly gap gene related)protein 1, isoform a protein.
          Length = 982

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
 Frame = +2

Query: 200 TQFKQTPCSI-PGCKHIADTLLDYENHYNATHRYSCAQCKKVLPSPHFLDLHIQENH 367
           TQ  QTP  + P C  +  +   + +H N    + C+ C     +   L  H++E+H
Sbjct: 328 TQNGQTPMLVCPICGFMCPSKFHFNSHMNTHGDHQCSMCDYTSRTEGRLKKHMRESH 384


>M93256-1|AAB59181.1| 1110|Caenorhabditis elegans tra-1 protein.
          Length = 1110

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +2

Query: 359 ENHDSYFAVMAEKKPSYCCYIEECKQKFNNTADRLDHCVREH 484
           EN  ++      +KP Y C   +C++ F+N +DR  H  R H
Sbjct: 291 ENLKTHRRTHTGEKP-YKCEFADCEKAFSNASDRAKHQNRTH 331


>AL117202-5|CAB61040.2| 1109|Caenorhabditis elegans Hypothetical
           protein Y47D3A.6a protein.
          Length = 1109

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +2

Query: 359 ENHDSYFAVMAEKKPSYCCYIEECKQKFNNTADRLDHCVREH 484
           EN  ++      +KP Y C   +C++ F+N +DR  H  R H
Sbjct: 290 ENLKTHRRTHTGEKP-YKCEFADCEKAFSNASDRAKHQNRTH 330


>AF097737-1|AAD16170.1|  982|Caenorhabditis elegans
           hunchback-related protein protein.
          Length = 982

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
 Frame = +2

Query: 200 TQFKQTPCSI-PGCKHIADTLLDYENHYNATHRYSCAQCKKVLPSPHFLDLHIQENH 367
           TQ  QTP  + P C  +  +   + +H N    + C+ C     +   L  H++E+H
Sbjct: 328 TQNGQTPMLVCPICGFMCPSKFHFNSHMNTHGDHQCSMCDYTSRTEGRLKKHMRESH 384


>U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical
           protein F42C5.10 protein.
          Length = 1292

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 13/92 (14%)
 Frame = +2

Query: 230 PGCKHIADTLLDYENHYNATHRYSCA------QCKKVLPS-PHFLDLH-----IQENHD- 370
           PG +HI   +  + ++Y+  HR   +       CK V+PS P + DL      +    D 
Sbjct: 456 PGLEHIPYKIGPFADYYDNVHRIILSHTKDLDHCKIVIPSFPDYYDLSTRYEVLHRVEDI 515

Query: 371 SYFAVMAEKKPSYCCYIEECKQKFNNTADRLD 466
            +  ++ E+ P+YC Y E+ K +    +  LD
Sbjct: 516 LHEPIVIEEYPAYCPY-EDTKYEVQEKSVTLD 546


>U61949-4|AAB03150.2|  414|Caenorhabditis elegans Hypothetical
           protein F49E8.2 protein.
          Length = 414

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
 Frame = +2

Query: 173 YDVDDG-NYNTQF-KQTPCSIPGCKHIADTLLDYEN-HYNATHRYSCAQCKKVLPSPHFL 343
           ++V+ G N NT+  KQT       +H+ D   + E  + +   RY C  C + LP     
Sbjct: 211 HEVETGRNRNTKIRKQT-------EHVLDAHPESEFLNVDIAKRYECVHCLRTLPVSKSP 263

Query: 344 DLHIQENHD 370
             HI E+HD
Sbjct: 264 CEHISEHHD 272


>U39997-9|AAA81101.2|  468|Caenorhabditis elegans Hypothetical
           protein F56D1.1 protein.
          Length = 468

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 272 NHYNATHRYSCAQCKKVLPSPHFLDLHIQENH 367
           +H  A+H+  C QC      P F+  H ++NH
Sbjct: 130 HHSKASHK--CPQCSYTNEKPAFIRRHFEQNH 159


>Z81547-1|CAB04459.1|  354|Caenorhabditis elegans Hypothetical
           protein F53F8.1 protein.
          Length = 354

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 13/55 (23%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
 Frame = +2

Query: 209 KQTPCSIPGCKHI---ADTLLDYENHYNATHRYSCAQCKKVLPSPHFLDLHIQEN 364
           K  PC  PGC      +D L  +   +     ++C +C +       L LH++ +
Sbjct: 281 KPYPCEWPGCSWRFARSDELTRHYRKHTGAKPFACKECSRKFSRSDHLQLHMKRH 335


>AL132904-7|CAC35838.1|  430|Caenorhabditis elegans Hypothetical
           protein Y111B2A.10a protein.
          Length = 430

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 13/56 (23%), Positives = 25/56 (44%)
 Frame = +2

Query: 203 QFKQTPCSIPGCKHIADTLLDYENHYNATHRYSCAQCKKVLPSPHFLDLHIQENHD 370
           +  Q+   +   + + D+LL     + A   ++C  C K  P+   L +H  + HD
Sbjct: 118 RMSQSQWKVEQKQQLEDSLL---KPHTAGSIFTCVMCSKAFPNAEALQIHTDQVHD 170


>Z81542-1|CAB04414.1|  379|Caenorhabditis elegans Hypothetical
           protein F49A5.2 protein.
          Length = 379

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = -2

Query: 468 WSNLSAVLLNFCLHSSM*QQYEGFFSAITAKYESWFSC 355
           ++N+   L   CL  S+ +   GF+  +     SWF C
Sbjct: 323 YNNIKRTLNGNCLFMSVSKHRRGFWYTVECTQRSWFLC 360


>Z81534-5|CAB04348.2|  694|Caenorhabditis elegans Hypothetical
           protein F37H8.2 protein.
          Length = 694

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +2

Query: 329 SPHFLDLHIQENHDSYFAVMAEKKPSYCCYIEECKQKF 442
           S + ++L   E H S F     +K  Y C   ECK  F
Sbjct: 367 SANEIELFFNEEHTSKFFGNYGQKSMYTCKFHECKASF 404


>Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical
           protein F26H11.2c protein.
          Length = 2266

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = -3

Query: 623 FIFAKRLLFAIVQMEFMGFRFVYVHGVRHFVFNPFFVFQNENLWVSCALGRSGLI-CRRC 447
           F F  + +F +V + FM +RF+Y    +  V N    FQN+     C      ++ C +C
Sbjct: 380 FFFNIKHVFRLVVLLFMSYRFLYSSEFKKLV-NNVGKFQNDENCRVCGKSSGRVVGCTQC 438


>Z81515-3|CAC42289.2| 1693|Caenorhabditis elegans Hypothetical
           protein F26H11.2b protein.
          Length = 1693

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = -3

Query: 623 FIFAKRLLFAIVQMEFMGFRFVYVHGVRHFVFNPFFVFQNENLWVSCALGRSGLI-CRRC 447
           F F  + +F +V + FM +RF+Y    +  V N    FQN+     C      ++ C +C
Sbjct: 380 FFFNIKHVFRLVVLLFMSYRFLYSSEFKKLV-NNVGKFQNDENCRVCGKSSGRVVGCTQC 438


>Z81515-2|CAB04197.2| 1691|Caenorhabditis elegans Hypothetical
           protein F26H11.2a protein.
          Length = 1691

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = -3

Query: 623 FIFAKRLLFAIVQMEFMGFRFVYVHGVRHFVFNPFFVFQNENLWVSCALGRSGLI-CRRC 447
           F F  + +F +V + FM +RF+Y    +  V N    FQN+     C      ++ C +C
Sbjct: 380 FFFNIKHVFRLVVLLFMSYRFLYSSEFKKLV-NNVGKFQNDENCRVCGKSSGRVVGCTQC 438


>Z81129-4|CAB03405.1|  330|Caenorhabditis elegans Hypothetical
           protein T23F1.6 protein.
          Length = 330

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = -3

Query: 380 QNTNRGSPVYAGLRNAAKVAPSCIERTSTCASRC-NGFHNLTVYQLCVYI 234
           QN N  +P Y   +   + AP C ++TST   +C N   N     + +Y+
Sbjct: 203 QNQNYYNP-YQQTQCQQQCAPQCSQQTSTNCQQCQNSCQNSNTQTITIYV 251


>Z47074-2|CAA87377.2|  694|Caenorhabditis elegans Hypothetical
           protein F37H8.2 protein.
          Length = 694

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +2

Query: 329 SPHFLDLHIQENHDSYFAVMAEKKPSYCCYIEECKQKF 442
           S + ++L   E H S F     +K  Y C   ECK  F
Sbjct: 367 SANEIELFFNEEHTSKFFGNYGQKSMYTCKFHECKASF 404


>U22832-3|AAA64508.2|  359|Caenorhabditis elegans Hypothetical
           protein C09F5.3 protein.
          Length = 359

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +2

Query: 269 ENHYNATHRYSCAQCKKVLPSPHFLDLHIQENHD 370
           + H      Y CA C    PS   L  H+Q +HD
Sbjct: 229 KQHSRQLIMYGCALCATSYPSQLHLITHVQMSHD 262


>AL132904-23|CAC35839.2|  312|Caenorhabditis elegans Hypothetical
           protein Y111B2A.10b protein.
          Length = 312

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +2

Query: 296 YSCAQCKKVLPSPHFLDLHIQENHD 370
           ++C  C K  P+   L +H  + HD
Sbjct: 28  FTCVMCSKAFPNAEALQIHTDQVHD 52


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,363,401
Number of Sequences: 27780
Number of extensions: 348652
Number of successful extensions: 1275
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1274
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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