Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_E01
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 171 4e-43
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 89 3e-18
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 89 3e-18
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 78 5e-15
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 77 1e-14
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 76 2e-14
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 73 2e-13
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 73 2e-13
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 73 2e-13
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 69 2e-12
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 64 1e-10
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 62 4e-10
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 61 6e-10
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 60 1e-09
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 57 1e-08
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 56 2e-08
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 50 1e-06
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 50 1e-06
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 50 1e-06
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 49 3e-06
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 48 4e-06
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 41 7e-04
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 40 0.002
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 36 0.019
Z98877-7|CAB63403.1| 292|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical pr... 32 0.41
AF101304-2|AAN60536.1| 1123|Caenorhabditis elegans Hypothetical ... 32 0.41
AF101304-1|AAC69200.2| 1121|Caenorhabditis elegans Hypothetical ... 32 0.41
Z81473-5|CAB03893.2| 139|Caenorhabditis elegans Hypothetical pr... 29 3.8
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 171 bits (416), Expect = 4e-43
Identities = 67/114 (58%), Positives = 98/114 (85%)
Frame = +2
Query: 221 MAATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIVPDNPPYNKGAFRIEINFPAE 400
M+ATRRLQKEL D++ G+K++ +++ +E+N+L W L++PD PYNKGAF++ I FP +
Sbjct: 1 MSATRRLQKELGDLKNCGVKAYENVECEETNLLKWTVLLIPDKEPYNKGAFKVGITFPVD 60
Query: 401 YPFKPPKISFKTKIYHPNIDEKGQVCLPIISAENXKPATKTDQVIQALVALVND 562
YPFKPPK++F+TKIYHPN+DE+G+ CLPI++AEN KPATKT+QV+ AL++L+N+
Sbjct: 61 YPFKPPKVAFETKIYHPNVDEEGKFCLPIVTAENWKPATKTEQVMMALLSLINE 114
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 89.0 bits (211), Expect = 3e-18
Identities = 43/113 (38%), Positives = 68/113 (60%), Gaps = 1/113 (0%)
Frame = +2
Query: 227 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 403
A +R+QKEL D+ + V + ++ WQ I+ P PY G F + I+FP +Y
Sbjct: 2 ALKRIQKELQDLGRDPPAQCSAGPVGD-DLFHWQATIMGPPESPYQGGVFFLTIHFPTDY 60
Query: 404 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENXKPATKTDQVIQALVALVND 562
PFKPPK++F T+IYHPNI+ G +CL I+ ++ PA +V+ ++ +L+ D
Sbjct: 61 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQ-WSPALTISKVLLSICSLLCD 112
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 89.0 bits (211), Expect = 3e-18
Identities = 43/113 (38%), Positives = 68/113 (60%), Gaps = 1/113 (0%)
Frame = +2
Query: 227 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 403
A +R+QKEL D+ + V + ++ WQ I+ P PY G F + I+FP +Y
Sbjct: 2 ALKRIQKELQDLGRDPPAQCSAGPVGD-DLFHWQATIMGPPESPYQGGVFFLTIHFPTDY 60
Query: 404 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENXKPATKTDQVIQALVALVND 562
PFKPPK++F T+IYHPNI+ G +CL I+ ++ PA +V+ ++ +L+ D
Sbjct: 61 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQ-WSPALTISKVLLSICSLLCD 112
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 78.2 bits (184), Expect = 5e-15
Identities = 34/85 (40%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Frame = +2
Query: 239 LQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKP 415
L+K+L D+R+ + F VD+++I W+ L++ P + Y G F+ ++FP +YP KP
Sbjct: 8 LKKQLADMRRVPVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKP 67
Query: 416 PKISFKTKIYHPNIDEKGQVCLPII 490
PK+ F ++I+HPNID++G VC+ I+
Sbjct: 68 PKMKFISEIWHPNIDKEGNVCISIL 92
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 77.0 bits (181), Expect = 1e-14
Identities = 36/87 (41%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Frame = +2
Query: 302 DESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVC 478
DESN + +I PD+ P+ G F++E+ P EYP PK+ F TKIYHPNID+ G++C
Sbjct: 29 DESNARYFHVMIAGPDDSPFAGGVFKLELFLPEEYPMAAPKVRFMTKIYHPNIDKLGRIC 88
Query: 479 LPIISAENXKPATKTDQVIQALVALVN 559
L I+ + PA + V+ ++ AL++
Sbjct: 89 LDILK-DKWSPALQIRTVLLSIQALLS 114
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 76.2 bits (179), Expect = 2e-14
Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Frame = +2
Query: 227 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQ-GLIVPDNPPYNKGAFRIEINFPAEY 403
A R L EL +++ ++ F I V+E N+ W G+ P Y G F+ I FP+ Y
Sbjct: 11 ALRALTMELKNLQSQPVEGFT-IDVNEDNLFVWTVGIYGPPKTLYQGGYFKASIRFPSNY 69
Query: 404 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENXKP 511
P+ PP + F TK++HPN+ E G +C+ I+ + P
Sbjct: 70 PYSPPSMKFTTKVWHPNVYENGDLCISILHSPIDDP 105
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 72.9 bits (171), Expect = 2e-13
Identities = 35/110 (31%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Frame = +2
Query: 236 RLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIVPDNPPYNKGAFRIEINFPAEYPFKP 415
R++KE+ D+ ++ + +D + E +Q I+ D Y F + ++ EYPFKP
Sbjct: 17 RIRKEIADLAKNKRRFIKDFRKIEKCKDIFQFKIIGDGVLYKNMIFTLTLDVNVEYPFKP 76
Query: 416 PKISFKTKIYHPNIDE-KGQVCLPIISAENXKPATKTDQVIQALVALVND 562
P + F +YHPN+D ++C P++ EN KP T + V+ L+ L+N+
Sbjct: 77 PYLKFCHNVYHPNVDPVTCELCSPMLLQENWKPETTMEDVLLNLIVLLNE 126
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 72.5 bits (170), Expect = 2e-13
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Frame = +2
Query: 218 TMAATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFP 394
T + RRL ++ +++ E NILTW+ +I P P+ G F++ + F
Sbjct: 2 TTPSRRRLMRDFKKLQEDPPAGVSGAPT-EDNILTWEAIIFGPQETPFEDGTFKLSLEFT 60
Query: 395 AEYPFKPPKISFKTKIYHPNIDEKGQVCLPIISAENXKPATKTDQVIQALVALVND 562
EYP KPP + F +K++HPN+ G +CL I+ P ++ ++ +L+++
Sbjct: 61 EEYPNKPPTVKFISKMFHPNVYADGSICLDILQ-NRWSPTYDVAAILTSIQSLLDE 115
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 72.5 bits (170), Expect = 2e-13
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Frame = +2
Query: 218 TMAATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFP 394
T + RRL ++ +++ E NILTW+ +I P P+ G F++ + F
Sbjct: 2 TTPSRRRLMRDFKKLQEDPPAGVSGAPT-EDNILTWEAIIFGPQETPFEDGTFKLSLEFT 60
Query: 395 AEYPFKPPKISFKTKIYHPNIDEKGQVCLPIISAENXKPATKTDQVIQALVALVND 562
EYP KPP + F +K++HPN+ G +CL I+ P ++ ++ +L+++
Sbjct: 61 EEYPNKPPTVKFISKMFHPNVYADGSICLDILQ-NRWSPTYDVAAILTSIQSLLDE 115
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 69.3 bits (162), Expect = 2e-12
Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Frame = +2
Query: 227 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 403
A +RL E ++ + +DE N W+ LI P+ + G F I FP +Y
Sbjct: 5 ALKRLMTEYKELTTRPPEGIIAAPIDEDNFFEWECLITGPEETCFANGVFPARITFPQDY 64
Query: 404 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENXKP 511
P PPK+ F I+HPNI G+VC+ I+ A P
Sbjct: 65 PLSPPKMRFTCGIFHPNIYADGRVCISILHAPGDDP 100
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 63.7 bits (148), Expect = 1e-10
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Frame = +2
Query: 227 ATRRLQKELNDIRQSGLKSFRDIQVD--ESNILTWQGLIV-PDNPPYNKGAFRIEINFPA 397
A RLQ+E ++ + S I ++ N+ +G I P + PY G F ++I P
Sbjct: 5 AFNRLQRECKEVVTNSEISETGIMIEILNENLTEIKGHIRGPPDTPYAGGMFDLDIKIPD 64
Query: 398 EYPFKPPKISFKTKIYHPNI-DEKGQVCLPII 490
+YPF PP + F TKI+HPN+ + G +CL I+
Sbjct: 65 QYPFSPPNVKFSTKIWHPNVSSQTGVICLDIL 96
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 61.7 bits (143), Expect = 4e-10
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = +2
Query: 341 PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDE-KGQVCLPIIS 493
P + Y G +RI ++ P +YPFK P I F KI+HPNIDE G VCL +I+
Sbjct: 42 PKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDVIN 93
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 61.3 bits (142), Expect = 6e-10
Identities = 40/119 (33%), Positives = 59/119 (49%), Gaps = 9/119 (7%)
Frame = +2
Query: 230 TRRLQKELNDIRQS-GLKSFRDIQV--DESNILTWQGLIV-PDNPPYNKGAFRIEINFPA 397
T+R+ KEL I + L + I V DE + + LI PD+ PY G F +I FP
Sbjct: 411 TKRIAKELASIANALPLNASNSIYVCYDEGRVDIIKVLISGPDDTPYANGLFEFDIFFPT 470
Query: 398 EYPFKPPKISFKTK-----IYHPNIDEKGQVCLPIISAENXKPATKTDQVIQALVALVN 559
YPF PPK +F T ++PN+ G++CL I+ +P K + + LV+
Sbjct: 471 GYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSILGTWEGRPEEKWNPYCSLMQVLVS 529
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 60.5 bits (140), Expect = 1e-09
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Frame = +2
Query: 335 IVPDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCLPIISAEN---- 502
+ P Y G FR +I P EY PP + TK++HPNI+E G +CL I+ +
Sbjct: 65 VTPQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILRQNSLDQY 124
Query: 503 -XKPATKTDQVIQALVALVND 562
+P V+ LV+L ND
Sbjct: 125 GWRPTRNLTDVVHGLVSLFND 145
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 56.8 bits (131), Expect = 1e-08
Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 19/114 (16%)
Frame = +2
Query: 206 SKFCTMAATRRLQKELN--DIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFR 376
S TR+ ++ N DI ++G+ +++ E+N++ +G I P+ PY G F
Sbjct: 16 SNLALARVTRKCKEVANASDITEAGIH----VEIKENNLMDIKGFIKGPEGTPYAGGTFE 71
Query: 377 IEINFPAEYPFKPPKIS---------------FKTKIYHPNI-DEKGQVCLPII 490
I+++ P YPF+PPK++ F T+I+HPNI + G +CL I+
Sbjct: 72 IKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRIWHPNISSQTGTICLDIL 125
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 56.0 bits (129), Expect = 2e-08
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 4/116 (3%)
Frame = +2
Query: 224 AATRRLQKELNDIRQSGLKSFRDIQVDESNILT-WQ-GLIVPDNPPYNKGAFRIEINFPA 397
AATRRL KEL ++ + SN L W+ G++ + Y F ++ F
Sbjct: 4 AATRRLMKELAQLKSEAPEGLLVDNTSTSNDLKQWKIGVVGAEGTLYAGEVFMLQFTFGP 63
Query: 398 EYPFKPPKISF--KTKIYHPNIDEKGQVCLPIISAENXKPATKTDQVIQALVALVN 559
+YPF P++ F +T HP+I G +CL I+S ++ PA V +++++++
Sbjct: 64 QYPFNSPEVMFVGETIPAHPHIYSNGHICLSILS-DDWTPALSVQSVCLSILSMLS 118
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = +2
Query: 311 NILTWQGLIVPDNPP-YNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCLPI 487
N+ W+ I + G +RI + F ++P PPK F+ ++HPN+ G VCL +
Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSL 96
Query: 488 ISA-ENXKPATKTDQVIQALVALVN 559
+ ++ KP+ Q++ + L+N
Sbjct: 97 LDENKDWKPSISIKQLLIGIQDLLN 121
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 50.4 bits (115), Expect = 1e-06
Identities = 33/142 (23%), Positives = 71/142 (50%), Gaps = 6/142 (4%)
Frame = +2
Query: 149 QLIDLNFKKE----YLWNILGHFSKFCTMAATRRLQKELNDIRQSGLKSFRDIQVDESNI 316
Q +DL++ +E L+++ + +F T + +K D R + + I + ++I
Sbjct: 8 QYVDLSYFRETADALLFDVETNSREFTNEINTVKEEKAKWDERTPQGYTAKPISFEGADI 67
Query: 317 -LTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCLPII 490
+W + P P+ G + + +NF ++P PP FKT ++HPN+D +G + L ++
Sbjct: 68 WCSWICTVPGPRGSPWEGGEYEVSVNFH-KWPIIPPICEFKTPLHHPNVDLRGSIYLKML 126
Query: 491 SAENXKPATKTDQVIQALVALV 556
E+ T ++++ + L+
Sbjct: 127 EQEHWSSETSLKKLLREISNLL 148
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = +2
Query: 311 NILTWQGLIVPDNPP-YNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCLPI 487
N+ W+ I + G +RI + F ++P PPK F+ ++HPN+ G VCL +
Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSL 96
Query: 488 ISA-ENXKPATKTDQVIQALVALVN 559
+ ++ KP+ Q++ + L+N
Sbjct: 97 LDENKDWKPSISIKQLLIGIQDLLN 121
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 48.8 bits (111), Expect = 3e-06
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Frame = +2
Query: 227 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 403
A +RL+K+ + + + + + E+NIL W+ +I+ PY G + ++ FP ++
Sbjct: 9 ALQRLKKDYQRLLKEPVPFMKAAPL-ETNILEWRYIIIGAPKTPYEGGIYMGKLLFPKDF 67
Query: 404 PFKPPKISFKTKIYHPNIDEKGQVCLPI--ISAENXKPATKTDQVIQALVALVND 562
PFKPP I T + ++CL I + PA +I L++ +ND
Sbjct: 68 PFKPPAILMLTP--NGRFQTNTRLCLSISDYHPDTWNPAWTVSTIITGLMSFMND 120
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 48.4 bits (110), Expect = 4e-06
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +2
Query: 326 QGLIVP-DNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDE-KGQVCL 481
QG+I + PY G F ++I YPFK P + F TKI+HP++ G +CL
Sbjct: 382 QGIIKGVEETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTICL 435
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 41.1 bits (92), Expect = 7e-04
Identities = 34/112 (30%), Positives = 50/112 (44%), Gaps = 1/112 (0%)
Frame = +2
Query: 224 AATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIVPD-NPPYNKGAFRIEINFPAE 400
A RRL KE ++RQ Q E N+ W I + G + I FPA+
Sbjct: 10 AGVRRLMKEAMELRQP--TEMYHAQPMEDNLFEWHFTIRGTLGTDFEGGIYHGRIIFPAD 67
Query: 401 YPFKPPKISFKTKIYHPNIDEKGQVCLPIISAENXKPATKTDQVIQALVALV 556
YP KPP + T +++K VCL IS + + + + AL+AL+
Sbjct: 68 YPMKPPNLILLTPNGRFELNKK--VCLS-ISGYHPETWLPSWSIRTALLALI 116
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 341 PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNID-EKGQVCLPIISAENXKPA 514
P + PY G F +++ FP YP P+I F+T I++ ++ GQV + S N A
Sbjct: 38 PADTPYETGVFEVDLTFPDNYPNALPQIKFQTLIWNCAVEPSTGQVHIENYSRLNVSEA 96
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 36.3 bits (80), Expect = 0.019
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +2
Query: 293 IQVDESNILT-WQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEK 466
++ D LT W I+ P PY + ++I YP +PP + F TK++ +++
Sbjct: 30 LEDDSDMTLTRWTASIIGPPRTPYESRIYNLQIQCGGNYPREPPTVRFTTKVHMVGVNQS 89
Query: 467 GQV 475
V
Sbjct: 90 NGV 92
>Z98877-7|CAB63403.1| 292|Caenorhabditis elegans Hypothetical
protein Y69H2.6 protein.
Length = 292
Score = 32.7 bits (71), Expect = 0.23
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = +2
Query: 308 SNILTWQGLIVPDNPPYNKGAFRIEINFPAEYPFKP--PKISF-KTKIYHPNIDEKG-QV 475
+N W G+I + G FR I+ P E+P P++ F ++ ++HP I K ++
Sbjct: 46 NNKFLWFGVIFVRKGIFGGGIFRFNIHIPLEFPDASDLPRVIFEQSNLFHPLICTKSKEL 105
Query: 476 CL 481
CL
Sbjct: 106 CL 107
>Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical
protein F26H9.7 protein.
Length = 219
Score = 31.9 bits (69), Expect = 0.41
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +2
Query: 293 IQVDESNILTWQGLIV-PDNPPYNKGAFRIEINF-PAEYPFKPPKISFKTKIYHPNIDEK 466
+++DE+ L + +I P Y G F +IN P + P++ F T I+HPN+ +
Sbjct: 54 MRIDETKQLLFHVIIDGPVGSIYEGGTFFADINIQPYQNHSLIPRVCFHTFIFHPNLGKY 113
Query: 467 G 469
G
Sbjct: 114 G 114
>AF101304-2|AAN60536.1| 1123|Caenorhabditis elegans Hypothetical
protein C02E11.1b protein.
Length = 1123
Score = 31.9 bits (69), Expect = 0.41
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 350 PPYNKGAFRIEINFPAEYPFKPPKISFK 433
P YNKG + ++++ PA Y F+P I K
Sbjct: 67 PVYNKGHYTLKVSAPAGYYFEPDSIEIK 94
>AF101304-1|AAC69200.2| 1121|Caenorhabditis elegans Hypothetical
protein C02E11.1a protein.
Length = 1121
Score = 31.9 bits (69), Expect = 0.41
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 350 PPYNKGAFRIEINFPAEYPFKPPKISFK 433
P YNKG + ++++ PA Y F+P I K
Sbjct: 65 PVYNKGHYTLKVSAPAGYYFEPDSIEIK 92
>Z81473-5|CAB03893.2| 139|Caenorhabditis elegans Hypothetical
protein C17D12.5 protein.
Length = 139
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 350 PPYNKGAFRIEINFPAEYPFKPPKISFKT 436
PPY + + + + P ++PF PP I+ KT
Sbjct: 46 PPYTE--YIVTVAIPPKFPFSPPAITCKT 72
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,998,408
Number of Sequences: 27780
Number of extensions: 290771
Number of successful extensions: 590
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 584
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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