Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_D24
         (410 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    27   0.27 
DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    27   0.35 
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            26   0.62 
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           26   0.62 
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    26   0.62 
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    22   7.6  

>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 27.1 bits (57), Expect = 0.27
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
 Frame = +2

Query: 83  PKRGPVGHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPD-RPGFKNQQERDRGGC 259
           P R P   R  V+   + D  K    T + G+      +    D + G++ +QE    G 
Sbjct: 161 PIRAPANIRSTVRWDYQPDICKDYKETGYCGFGDSCKFLHDRSDYKHGWQMEQEGGGSGH 220

Query: 260 HHHRDSSDG 286
           +H  D SDG
Sbjct: 221 NHGGDDSDG 229


>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 26.6 bits (56), Expect = 0.35
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
 Frame = +2

Query: 83  PKRGPVGHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPD-RPGFKNQQERDRGGC 259
           P R P   R  V+   + D  K    T + G+      +    D + G++ +QE    G 
Sbjct: 161 PIRAPANIRSTVRWDYQPDICKDYKETGYCGFGDSCKFLHDRSDYKHGWQMEQEGAGSGH 220

Query: 260 HHHRDSSDG 286
           +H  D SDG
Sbjct: 221 NHGGDDSDG 229


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 25.8 bits (54), Expect = 0.62
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +3

Query: 282 MVCVXCCWIH*DPSWTTRSVDCLGGAYV*RL 374
           M C   C  + D SW++  VDC    Y  RL
Sbjct: 756 MECPKQCTCYHDQSWSSNVVDCSRAGYDDRL 786


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 25.8 bits (54), Expect = 0.62
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +3

Query: 282 MVCVXCCWIH*DPSWTTRSVDCLGGAY 362
           M C   C  + D SW+T  V+C    Y
Sbjct: 792 MTCPNNCACYHDNSWSTNIVECSAAGY 818


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 25.8 bits (54), Expect = 0.62
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +1

Query: 325 GLRALXTVWAEHMSEDCRRSLLQK 396
           G+R   ++WAE +  +CR+  L++
Sbjct: 770 GIRYASSIWAESLKFECRKQWLRR 793



 Score = 22.6 bits (46), Expect = 5.7
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = -2

Query: 235 LIFEAGTVRFSNHVGHTGLITDKSSQMNRFARVV 134
           +I E  T+R S H+ + G++ D   +  +  + V
Sbjct: 701 IIVEGHTIRSSRHLKYLGIMIDDRLEYTQHIKYV 734


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 22.2 bits (45), Expect = 7.6
 Identities = 12/45 (26%), Positives = 18/45 (40%)
 Frame = +2

Query: 143 SKPVHLTAFIGYKAGMTHVVREPDRPGFKNQQERDRGGCHHHRDS 277
           +KP H T         TH + +PD        + DR   +  +DS
Sbjct: 306 NKPAHQTPTSSGIGSRTHPLYQPDHRAEPTSFDFDRIDTYSQKDS 350


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 432,195
Number of Sequences: 2352
Number of extensions: 8121
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 33349914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)