Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_D20
         (579 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1220 - 24966169-24966327,24966421-24966552,24966639-249666...   302   1e-82
05_04_0322 + 20239793-20240127,20240176-20240728,20241317-202414...    29   2.0  
07_01_0214 + 1595917-1596526,1597127-1597140,1598414-1598743,159...    29   2.7  
08_01_0892 - 8778097-8778236,8778390-8778486,8778568-8778747,877...    28   4.7  
11_06_0406 - 23192363-23194911,23195152-23195247,23195622-23196090     28   6.2  
08_01_0346 - 3063440-3064189                                           28   6.2  
05_05_0311 - 24004380-24004440,24004685-24004756,24004875-240049...    28   6.2  

>07_03_1220 -
           24966169-24966327,24966421-24966552,24966639-24966693,
           24967496-24967667,24967771-24967918,24968015-24968050
          Length = 233

 Score =  302 bits (741), Expect = 1e-82
 Identities = 149/178 (83%), Positives = 159/178 (89%)
 Frame = +1

Query: 46  ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 225
           ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP+R+EIII ATRTQ+VLGEKGR
Sbjct: 7   ISKKRKFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 66

Query: 226 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 405
           RIRELTSVVQKRFN PE  VELYAEKV  RGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 67  RIRELTSVVQKRFNFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 126

Query: 406 FIMESGARGCEVVVSGKLRGQRAKSMKFVXGLMIHSGDPCNDYVNTATRHVLLXQGVL 579
           F+MESGA+GCEV+VSGKLR QRAKSMKF  G MI SG P N Y+++A RHVLL QGVL
Sbjct: 127 FVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGYPVNLYIDSAVRHVLLRQGVL 184


>05_04_0322 +
           20239793-20240127,20240176-20240728,20241317-20241425,
           20244456-20244723,20244943-20245197,20245594-20246539
          Length = 821

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = +3

Query: 303 GGYSWSLRYRPG-RISKIQAYRRSRCTSCLLWC 398
           G  SWS RY+    ISK   Y   RC  C++ C
Sbjct: 665 GALSWSRRYQIAIGISKGLPYLHERCRDCIIHC 697


>07_01_0214 +
           1595917-1596526,1597127-1597140,1598414-1598743,
           1598853-1598963,1599113-1599269,1603366-1603619,
           1603762-1603960,1604341-1604498
          Length = 610

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 16/35 (45%), Positives = 16/35 (45%)
 Frame = -3

Query: 487 TSLIWHVDHAACQIQQLHNHGHQIP**NGEHHSKH 383
           T L  H   AA    Q H HGH      G HHSKH
Sbjct: 247 TPLALHQAAAAAGPSQYHGHGHPHH-GGGHHHSKH 280


>08_01_0892 -
           8778097-8778236,8778390-8778486,8778568-8778747,
           8779138-8779247,8781153-8781294,8782298-8782686,
           8782752-8782834,8783524-8785244,8785894-8786040,
           8786121-8786264,8786669-8786741,8787413-8787633
          Length = 1148

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 16/76 (21%), Positives = 34/76 (44%)
 Frame = -1

Query: 576 YSLXEKHMSGSSVDVIIARVSRVDHESXYKLH*FGTLTTQLARYNNFTTTGTRFHDETEN 397
           + L +  + GS  +++   V R D ++ Y+    G ++     +NN +++G   HD   N
Sbjct: 739 FKLNQVCIDGSRDELLETDVIRQDIKALYQSIDMGLVSEATVCFNNVSSSGLSVHDTGGN 798

Query: 396 TIASTTYSETSDKLVS 349
            I         ++ +S
Sbjct: 799 VIGQGDQDSEKNRYLS 814


>11_06_0406 - 23192363-23194911,23195152-23195247,23195622-23196090
          Length = 1037

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -3

Query: 517 LQSGS*VHXQTSLIWHVDHAACQIQQLHNHGH 422
           +QSG+       LIWH+  + C+I+    H H
Sbjct: 753 IQSGAPRCSHVILIWHIATSLCEIKLAQEHDH 784


>08_01_0346 - 3063440-3064189
          Length = 249

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = +1

Query: 337 AESLRYKLIGGLAVRRACYGVLR 405
           A S    L+GG A   ACYGVLR
Sbjct: 221 ARSAARVLLGGWAAMAACYGVLR 243


>05_05_0311 -
           24004380-24004440,24004685-24004756,24004875-24004946,
           24005155-24005298,24005535-24005606,24006057-24006286
          Length = 216

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = -1

Query: 177 DLRADGSDPHFHAGVAVLGQLPSEELIEFRLENPISNKFSLL*NIVHGHDCN 22
           DL       H  A +A L QL   E+    +E PI  +F  L N++    CN
Sbjct: 78  DLEEMNLSGHLSADLARLDQLQFMEIASNNIEGPIPPEFGNLENLISLDLCN 129


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,968,705
Number of Sequences: 37544
Number of extensions: 328731
Number of successful extensions: 869
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1352600424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)