Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_D16
         (480 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1783 + 29480987-29481165,29481526-29481685,29481767-294818...    31   0.49 
12_02_0445 - 19153580-19154269                                         27   6.0  
10_08_0538 + 18629882-18630675,18630771-18631011                       27   6.0  
03_04_0058 - 16915281-16915313,16915424-16915535,16915585-169169...    27   6.0  
02_02_0435 + 10206569-10206730,10207126-10207230,10207897-102079...    27   6.0  

>07_03_1783 +
           29480987-29481165,29481526-29481685,29481767-29481862,
           29481948-29482062,29482175-29482337,29482536-29482707,
           29483924-29484013,29484137-29484598,29484675-29485268,
           29485486-29485554,29485810-29485902,29486432-29486677,
           29487277-29487417,29487748-29487828,29487911-29487973,
           29488059-29488166,29488303-29488383,29488474-29488521,
           29488979-29489053,29489973-29490068,29490156-29490236,
           29490295-29490402,29490989-29491033,29491119-29491202,
           29491379-29491482,29491581-29491728
          Length = 1233

 Score = 31.1 bits (67), Expect = 0.49
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +1

Query: 208 PLDLDPALSFCTHLLYGYAGIQPDTYKLVSLNENLDIXRTHDNYRAIT 351
           PL+LDP      H+L  Y   +  TY LV     + +   HDNY+ I+
Sbjct: 679 PLELDPWELLQKHVLSDYVNNENATY-LVDWQRKIILDNYHDNYKNIS 725


>12_02_0445 - 19153580-19154269
          Length = 229

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = -1

Query: 261 IAVQQVGAERQSGIEVQRQHAG 196
           + V+++ A R+ G+EVQR HAG
Sbjct: 107 VEVRELLARRRLGVEVQRVHAG 128


>10_08_0538 + 18629882-18630675,18630771-18631011
          Length = 344

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3

Query: 393 GGGDADTEXTRKILPSAGIAASP 461
           GGG  D E  R+ILP   +AA P
Sbjct: 29  GGGGGDEEQKRQILPLPSMAAMP 51


>03_04_0058 -
           16915281-16915313,16915424-16915535,16915585-16916990,
           16919112-16919282
          Length = 573

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 16/44 (36%), Positives = 19/44 (43%)
 Frame = +3

Query: 135 GNPQQSTLLLRQQELCQRISSPHAAVGPRSRSVVLHPLAVRLCR 266
           GN Q +  L  Q   CQR+ S  A  G        HP+  RL R
Sbjct: 105 GNLQLAWELSSQIRNCQRLLSEEAVSGKAITKEEAHPIITRLAR 148


>02_02_0435 +
           10206569-10206730,10207126-10207230,10207897-10207986,
           10208256-10208369,10208477-10208530,10208951-10209067,
           10209530-10209639,10209752-10209825,10209921-10209982,
           10210240-10210435,10210506-10210569,10210789-10210832,
           10210974-10211116,10211521-10211751
          Length = 521

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = -3

Query: 469 KQYGLAAIPAEGNIFLVXSVSASPPPDNNTVRPGTWLSSW*SHG 338
           K  G  ++P EG +  +     S   +N TV PG ++  W   G
Sbjct: 387 KSIGYKSLPVEGIVPNLKGRVLSSESENATVEPGLYVVGWLKRG 430


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,527,009
Number of Sequences: 37544
Number of extensions: 239338
Number of successful extensions: 674
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 674
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 991020332
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)