Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_D06
         (390 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0556 + 30207124-30207581,30207692-30207901,30208016-302081...    27   7.0  

>01_06_0556 +
           30207124-30207581,30207692-30207901,30208016-30208100,
           30208517-30208676,30208768-30208844,30208985-30209032,
           30209504-30209594,30209703-30210004,30210214-30210495,
           30210695-30211011,30211113-30211273,30211556-30211665,
           30211752-30211902,30212438-30212578,30212688-30212857,
           30213485-30213817,30213981-30214271,30214356-30214439,
           30214620-30214753,30214946-30215173,30215273-30215444,
           30215621-30215875,30215963-30216232
          Length = 1509

 Score = 26.6 bits (56), Expect = 7.0
 Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +1

Query: 97  SDYVNLCITIVSXKLEEFFKHLIYFFYQFYTFQ-PNI 204
           S + +L +T+   +L  F+KH  + FY+ +TF  PN+
Sbjct: 613 SGFADLSLTLA--RLPVFYKHRDFLFYRPWTFALPNV 647


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,098,881
Number of Sequences: 37544
Number of extensions: 63246
Number of successful extensions: 87
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 87
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 660830060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)