Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_D06
         (390 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X60196-1|CAA42752.1|  282|Drosophila melanogaster myosin heavy c...    28   5.0  
AE014134-2778|AAN10969.1| 1936|Drosophila melanogaster CG17927-P...    28   5.0  
AE014134-2777|AAN10968.1| 1936|Drosophila melanogaster CG17927-P...    28   5.0  

>X60196-1|CAA42752.1|  282|Drosophila melanogaster myosin heavy
           chain protein.
          Length = 282

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +1

Query: 103 YVNLCITIVSXKLEEFFKHLIYFFYQ 180
           +  LCI   + KL++FF H+++   Q
Sbjct: 140 FEQLCINFTNEKLQQFFNHIMFVMEQ 165


>AE014134-2778|AAN10969.1| 1936|Drosophila melanogaster CG17927-PL,
           isoform L protein.
          Length = 1936

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +1

Query: 103 YVNLCITIVSXKLEEFFKHLIYFFYQ 180
           +  LCI   + KL++FF H+++   Q
Sbjct: 472 FEQLCINFTNEKLQQFFNHIMFVMEQ 497


>AE014134-2777|AAN10968.1| 1936|Drosophila melanogaster CG17927-PK,
           isoform K protein.
          Length = 1936

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +1

Query: 103 YVNLCITIVSXKLEEFFKHLIYFFYQ 180
           +  LCI   + KL++FF H+++   Q
Sbjct: 472 FEQLCINFTNEKLQQFFNHIMFVMEQ 497


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,070,020
Number of Sequences: 53049
Number of extensions: 125893
Number of successful extensions: 216
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 216
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1086986940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)