Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_C20
(548 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 142 1e-34
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 142 1e-34
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 104 5e-23
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 98 3e-21
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 89 2e-18
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 86 2e-17
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 85 2e-17
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 85 3e-17
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 84 7e-17
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 82 3e-16
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 82 3e-16
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 82 3e-16
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 81 7e-16
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 80 9e-16
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 80 9e-16
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 80 9e-16
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 79 3e-15
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 79 3e-15
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 78 4e-15
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 78 4e-15
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 78 4e-15
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 77 8e-15
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 76 1e-14
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 76 1e-14
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 76 1e-14
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 75 3e-14
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 74 6e-14
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 74 6e-14
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 73 2e-13
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 70 1e-12
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 70 1e-12
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 69 3e-12
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 69 3e-12
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 68 4e-12
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 66 1e-11
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 65 3e-11
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 64 6e-11
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 64 6e-11
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 64 6e-11
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 64 6e-11
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 64 6e-11
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 62 3e-10
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 60 8e-10
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 60 1e-09
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 55 3e-08
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 55 3e-08
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 55 3e-08
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 50 1e-06
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 47 1e-05
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 35 0.044
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 35 0.044
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 34 0.059
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 34 0.059
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical p... 32 0.31
AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase... 32 0.31
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 29 2.2
U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn (wern... 29 2.9
Z72502-1|CAA96585.2| 430|Caenorhabditis elegans Hypothetical pr... 28 3.9
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 142 bits (345), Expect = 1e-34
Identities = 70/120 (58%), Positives = 91/120 (75%)
Frame = +1
Query: 166 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 345
+G +Q +GL V K I K+G+ QPTPIQRKTIP + GKDVVAM+RTGSGKTA FV+P+
Sbjct: 23 AGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPM 82
Query: 346 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQXF 525
L+KL + T G +RAL++SPTRELALQT + V+ELG+FTGL A ++GG+ IE+ F
Sbjct: 83 LQKL---KRRDTTG--IRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQF 137
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 142 bits (345), Expect = 1e-34
Identities = 70/120 (58%), Positives = 91/120 (75%)
Frame = +1
Query: 166 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 345
+G +Q +GL V K I K+G+ QPTPIQRKTIP + GKDVVAM+RTGSGKTA FV+P+
Sbjct: 23 AGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPM 82
Query: 346 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQXF 525
L+KL + T G +RAL++SPTRELALQT + V+ELG+FTGL A ++GG+ IE+ F
Sbjct: 83 LQKL---KRRDTTG--IRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQF 137
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 104 bits (249), Expect = 5e-23
Identities = 53/111 (47%), Positives = 69/111 (62%)
Frame = +1
Query: 172 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 351
+F+ M LS +LK + GY PTPIQ+ IP+ALTGKD+ A A TG+GKTA FVLPILE
Sbjct: 149 SFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILE 208
Query: 352 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGG 504
+++ +P R L+L PTRELA+Q + R+L F L GG
Sbjct: 209 RMIY---RPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAGG 256
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 98.3 bits (234), Expect = 3e-21
Identities = 51/113 (45%), Positives = 68/113 (60%)
Frame = +1
Query: 175 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 354
F+ LS+ L+G+ Y +PT IQR TI +LTG DVV A+TGSGKT V+P+LE
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEA 137
Query: 355 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESI 513
L K +P L ALI+SPTRELALQT + +G G + ++GG +
Sbjct: 138 LW--RAKWSPDYGLGALIISPTRELALQTFSTINAVGAHHGFSCGLVIGGSDV 188
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 89.0 bits (211), Expect = 2e-18
Identities = 47/121 (38%), Positives = 73/121 (60%), Gaps = 3/121 (2%)
Frame = +1
Query: 175 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 354
++ G V + + + GY +PTPIQR+ IPI L +DV+ +A TGSGKTA F+LP+L
Sbjct: 303 WEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVW 362
Query: 355 LL-VPNNKPTPGKNL--RALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQXF 525
+ +P + ++L A+I++PTRELA Q + GK G+ + +++GG S E
Sbjct: 363 ITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKLLGIKTVSVIGGASREDQG 422
Query: 526 M 528
M
Sbjct: 423 M 423
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 85.8 bits (203), Expect = 2e-17
Identities = 44/118 (37%), Positives = 72/118 (61%)
Frame = +1
Query: 175 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 354
F+ L +L GI ++G+++P+PIQ +I +ALTG+D++A A+ G+GKT + +P++EK
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEK 104
Query: 355 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQXFM 528
+ +P K ++A+++ PTRELALQT + EL K L GG + M
Sbjct: 105 I-----QPAL-KAIQAMVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTDLRDDIM 156
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 85.4 bits (202), Expect = 2e-17
Identities = 45/113 (39%), Positives = 70/113 (61%)
Frame = +1
Query: 175 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 354
F MGL +L+GI G+++P+ IQ++ IP L +DV+A A++G+GKTA F + +L+
Sbjct: 28 FDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQS 87
Query: 355 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESI 513
L T + +ALILSPTRELA+Q + V LG + + A +GG ++
Sbjct: 88 L------DTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNL 134
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 85.0 bits (201), Expect = 3e-17
Identities = 44/113 (38%), Positives = 70/113 (61%)
Frame = +1
Query: 175 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 354
F MGL +L+GI G+++P+ IQ++ +P L +DV+A A++G+GKTA F + +L+
Sbjct: 28 FDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSISVLQS 87
Query: 355 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESI 513
L T + +ALILSPTRELA+Q + V LG + + A +GG ++
Sbjct: 88 L------DTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNL 134
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 83.8 bits (198), Expect = 7e-17
Identities = 45/111 (40%), Positives = 67/111 (60%)
Frame = +1
Query: 172 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 351
+F +G+S P+ + G+ +P+ IQ+ +P AL GKDV+ +A TGSGKT F +P+L+
Sbjct: 45 SFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQ 104
Query: 352 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGG 504
LL + P + L+L+PTRELA Q + LG GL +A I+GG
Sbjct: 105 SLL---DHP---QAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGG 149
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 81.8 bits (193), Expect = 3e-16
Identities = 45/119 (37%), Positives = 71/119 (59%), Gaps = 9/119 (7%)
Frame = +1
Query: 175 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 354
F G V++ + + GY +PTP+Q+ +IP L +D+++ A+TGSGKTA F+LPI++
Sbjct: 141 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQH 200
Query: 355 LLV--PNN-KPTPGKNLR------ALILSPTRELALQTLRFVRELGKFTGLTSAAILGG 504
+L P+ KP N R AL+LSPTRELA+Q + + + + +A + GG
Sbjct: 201 ILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGG 259
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 81.8 bits (193), Expect = 3e-16
Identities = 45/119 (37%), Positives = 71/119 (59%), Gaps = 9/119 (7%)
Frame = +1
Query: 175 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 354
F G V++ + + GY +PTP+Q+ +IP L +D+++ A+TGSGKTA F+LPI++
Sbjct: 125 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQH 184
Query: 355 LLV--PNN-KPTPGKNLR------ALILSPTRELALQTLRFVRELGKFTGLTSAAILGG 504
+L P+ KP N R AL+LSPTRELA+Q + + + + +A + GG
Sbjct: 185 ILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGG 243
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 81.8 bits (193), Expect = 3e-16
Identities = 45/119 (37%), Positives = 71/119 (59%), Gaps = 9/119 (7%)
Frame = +1
Query: 175 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 354
F G V++ + + GY +PTP+Q+ +IP L +D+++ A+TGSGKTA F+LPI++
Sbjct: 122 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQH 181
Query: 355 LLV--PNN-KPTPGKNLR------ALILSPTRELALQTLRFVRELGKFTGLTSAAILGG 504
+L P+ KP N R AL+LSPTRELA+Q + + + + +A + GG
Sbjct: 182 ILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGG 240
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 80.6 bits (190), Expect = 7e-16
Identities = 42/111 (37%), Positives = 65/111 (58%)
Frame = +1
Query: 187 GLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVP 366
G++ ++ + K Y +PT IQ + IP ++G+DV+ +A+TGSGKT F+LP+ +L
Sbjct: 310 GVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHIL-D 368
Query: 367 NNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQ 519
+ G A+IL+PTRELA+QT + + K GL A GG I +
Sbjct: 369 QPELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGISE 419
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 80.2 bits (189), Expect = 9e-16
Identities = 44/116 (37%), Positives = 66/116 (56%), Gaps = 3/116 (2%)
Frame = +1
Query: 175 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 354
F L+ + K + GY + TPIQ+ +P+ G D++A A+TGSGKTA F+LPI+ +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 355 LLVPNNKPTPGKN---LRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESI 513
L+ NN T G+ R +IL+PTRELA Q R+ T + + GG ++
Sbjct: 403 LIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAV 458
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 80.2 bits (189), Expect = 9e-16
Identities = 44/116 (37%), Positives = 66/116 (56%), Gaps = 3/116 (2%)
Frame = +1
Query: 175 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 354
F L+ + K + GY + TPIQ+ +P+ G D++A A+TGSGKTA F+LPI+ +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 355 LLVPNNKPTPGKN---LRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESI 513
L+ NN T G+ R +IL+PTRELA Q R+ T + + GG ++
Sbjct: 403 LIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAV 458
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 80.2 bits (189), Expect = 9e-16
Identities = 44/116 (37%), Positives = 66/116 (56%), Gaps = 3/116 (2%)
Frame = +1
Query: 175 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 354
F L+ + K + GY + TPIQ+ +P+ G D++A A+TGSGKTA F+LPI+ +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 355 LLVPNNKPTPGKN---LRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESI 513
L+ NN T G+ R +IL+PTRELA Q R+ T + + GG ++
Sbjct: 403 LIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAV 458
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 78.6 bits (185), Expect = 3e-15
Identities = 41/114 (35%), Positives = 72/114 (63%)
Frame = +1
Query: 172 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 351
+F M L +L+GI G+++P+ IQ++ I TGKDV+A A++G+GKTA F + IL+
Sbjct: 30 SFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQ 89
Query: 352 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESI 513
+ + + P +++AL+++PTRELA Q + + LG++ + +GG S+
Sbjct: 90 R--IDHEDP----HVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSV 137
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 78.6 bits (185), Expect = 3e-15
Identities = 41/114 (35%), Positives = 72/114 (63%)
Frame = +1
Query: 172 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 351
+F M L +L+GI G+++P+ IQ++ I TGKDV+A A++G+GKTA F + IL+
Sbjct: 30 SFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQ 89
Query: 352 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESI 513
+ + + P +++AL+++PTRELA Q + + LG++ + +GG S+
Sbjct: 90 R--IDHEDP----HVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSV 137
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 78.2 bits (184), Expect = 4e-15
Identities = 43/116 (37%), Positives = 65/116 (56%), Gaps = 3/116 (2%)
Frame = +1
Query: 175 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 354
F L + K + GY + TPIQ+ T+P+ G D++A A+TGSGKTA F+LPI+ +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 355 LLVPNNKPTPGKN---LRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESI 513
L+ N+ T G+ R +IL+PTREL Q R+ T + + GG ++
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAV 669
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 78.2 bits (184), Expect = 4e-15
Identities = 43/116 (37%), Positives = 65/116 (56%), Gaps = 3/116 (2%)
Frame = +1
Query: 175 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 354
F L + K + GY + TPIQ+ T+P+ G D++A A+TGSGKTA F+LPI+ +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 355 LLVPNNKPTPGKN---LRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESI 513
L+ N+ T G+ R +IL+PTREL Q R+ T + + GG ++
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAV 669
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 78.2 bits (184), Expect = 4e-15
Identities = 43/116 (37%), Positives = 65/116 (56%), Gaps = 3/116 (2%)
Frame = +1
Query: 175 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 354
F L + K + GY + TPIQ+ T+P+ G D++A A+TGSGKTA F+LPI+ +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 355 LLVPNNKPTPGKN---LRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESI 513
L+ N+ T G+ R +IL+PTREL Q R+ T + + GG ++
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAV 669
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 77.0 bits (181), Expect = 8e-15
Identities = 44/103 (42%), Positives = 63/103 (61%)
Frame = +1
Query: 202 VLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVPNNKPT 381
+LK + G+ T IQ K+I L GKDV+A A+TGSGKT F+LP +E L N K
Sbjct: 79 LLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQH 138
Query: 382 PGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGES 510
G + +I+SPTREL++QT + EL + + LT ++GG +
Sbjct: 139 NGTGV--IIVSPTRELSMQTYGVLSELLEGSNLTYGLVMGGSN 179
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 76.2 bits (179), Expect = 1e-14
Identities = 41/104 (39%), Positives = 64/104 (61%), Gaps = 1/104 (0%)
Frame = +1
Query: 202 VLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLL-VPNNKP 378
+++ I K Y+QPTPIQ IP AL+G+DV+ +A+TGSGKTA ++ P + ++ P+ K
Sbjct: 276 LMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLK- 334
Query: 379 TPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGES 510
G+ A+I+ PTRELA+Q + ++ K + GG S
Sbjct: 335 -AGEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINPICAYGGGS 377
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 76.2 bits (179), Expect = 1e-14
Identities = 41/117 (35%), Positives = 67/117 (57%), Gaps = 3/117 (2%)
Frame = +1
Query: 172 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 351
+F + + + + + GY + TPIQ+ T+P+ GKD++A A+TGSGKTA F+LPI+
Sbjct: 299 SFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMS 358
Query: 352 KLLVP---NNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESI 513
+L++ N G R +IL+PTRELA Q R+ + + + GG ++
Sbjct: 359 RLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINV 415
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 76.2 bits (179), Expect = 1e-14
Identities = 41/117 (35%), Positives = 67/117 (57%), Gaps = 3/117 (2%)
Frame = +1
Query: 172 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 351
+F + + + + + GY + TPIQ+ T+P+ GKD++A A+TGSGKTA F+LPI+
Sbjct: 299 SFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMS 358
Query: 352 KLLVP---NNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESI 513
+L++ N G R +IL+PTRELA Q R+ + + + GG ++
Sbjct: 359 RLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINV 415
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 75.4 bits (177), Expect = 3e-14
Identities = 44/120 (36%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Frame = +1
Query: 175 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 354
F + L + + I GY +PTP+Q+ +IP G+D+++ A+TGSGKTA F++P++
Sbjct: 168 FSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTGSGKTAAFLVPLVNA 227
Query: 355 LL------VPNNKPTPGKNLR----ALILSPTRELALQTLRFVRELGKFTGLTSAAILGG 504
+L V + + G + AL+LSPTREL+LQ R+ T +TSA + GG
Sbjct: 228 ILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNESRKFAYRTPITSALLYGG 287
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 74.1 bits (174), Expect = 6e-14
Identities = 44/113 (38%), Positives = 60/113 (53%)
Frame = +1
Query: 175 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 354
F +G+ + + + K TP+Q IP L G D++ ARTG+GKT F +PIL+K
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 355 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESI 513
L V + ALIL+PTRELA Q LGK L + I+GG S+
Sbjct: 151 LSV------DPYGIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSL 197
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 74.1 bits (174), Expect = 6e-14
Identities = 44/113 (38%), Positives = 60/113 (53%)
Frame = +1
Query: 175 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 354
F +G+ + + + K TP+Q IP L G D++ ARTG+GKT F +PIL+K
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 355 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESI 513
L V + ALIL+PTRELA Q LGK L + I+GG S+
Sbjct: 151 LSV------DPYGIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSL 197
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 72.5 bits (170), Expect = 2e-13
Identities = 40/107 (37%), Positives = 65/107 (60%), Gaps = 6/107 (5%)
Frame = +1
Query: 202 VLKGITKRGYKQPTPIQRKTIPIALTGK-DVVAMARTGSGKTACFVLPILEKLLVPNN-- 372
VL+ I + G+ +PT IQ +P A+ + DV+ A TGSGKT F +P++ +LL ++
Sbjct: 166 VLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDS 225
Query: 373 ---KPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGG 504
+ T + RALI++PTREL +Q ++ + L T L + +I+GG
Sbjct: 226 QETESTEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGG 272
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 69.7 bits (163), Expect = 1e-12
Identities = 44/100 (44%), Positives = 56/100 (56%), Gaps = 8/100 (8%)
Frame = +1
Query: 235 QPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLL--------VPNNKPTPGK 390
+PTPIQR + + G DVVA A TGSGKT F++P + KL+ V + KP+P
Sbjct: 758 RPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSP-- 815
Query: 391 NLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGES 510
R LI++PTREL QT R+L TGL GG S
Sbjct: 816 --RLLIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYS 853
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 69.7 bits (163), Expect = 1e-12
Identities = 44/100 (44%), Positives = 56/100 (56%), Gaps = 8/100 (8%)
Frame = +1
Query: 235 QPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLL--------VPNNKPTPGK 390
+PTPIQR + + G DVVA A TGSGKT F++P + KL+ V + KP+P
Sbjct: 758 RPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSP-- 815
Query: 391 NLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGES 510
R LI++PTREL QT R+L TGL GG S
Sbjct: 816 --RLLIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYS 853
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 68.5 bits (160), Expect = 3e-12
Identities = 40/116 (34%), Positives = 64/116 (55%), Gaps = 5/116 (4%)
Frame = +1
Query: 178 QSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPIL--- 348
Q+ G + ++ I K G+++P+PIQ + P+ L+G+D + +++TGSGKT F+LP L
Sbjct: 87 QAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHI 146
Query: 349 --EKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGES 510
+ N + L+LSPTRELA Q V++ + G S + GG S
Sbjct: 147 DAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKY-SYNGYKSVCLYGGGS 201
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 68.5 bits (160), Expect = 3e-12
Identities = 32/98 (32%), Positives = 56/98 (57%)
Frame = +1
Query: 175 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 354
F GL +LK I + G+++ +Q I +AL K+++ ARTGSGKT F++P+++K
Sbjct: 91 FADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQK 150
Query: 355 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGK 468
L+ + A+I++PT+EL Q + +L +
Sbjct: 151 LIAESKTNDGSVGPSAVIIAPTKELITQIYKLFVKLSQ 188
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 68.1 bits (159), Expect = 4e-12
Identities = 38/116 (32%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Frame = +1
Query: 175 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 354
F +S +L +++ +QP+PIQ ++IP ++V+A A TGSGKT F LP++++
Sbjct: 128 FSDSSMSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALPVIDE 187
Query: 355 LLVPNNK----PTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGES 510
+L + + L A++L PTRELA QT + T +++A G E+
Sbjct: 188 ILELKQRADYSSSNSSKLLAVVLEPTRELAAQTYTEFLKYCANTSISAANFSGEET 243
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 66.5 bits (155), Expect = 1e-11
Identities = 35/94 (37%), Positives = 55/94 (58%)
Frame = +1
Query: 229 YKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALI 408
+++PT IQ + PIA++G+D++++A+TGSGKT F+LP L + ++ G+ L+
Sbjct: 149 FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQR-GEGPAVLV 207
Query: 409 LSPTRELALQTLRFVRELGKFTGLTSAAILGGES 510
L PTRELA Q + GL + GG S
Sbjct: 208 LLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGAS 241
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 65.3 bits (152), Expect = 3e-11
Identities = 36/98 (36%), Positives = 59/98 (60%), Gaps = 6/98 (6%)
Frame = +1
Query: 229 YKQPTPIQRKTIPIALTGK-DVVAMARTGSGKTACFVLPILEKLLVPNN-----KPTPGK 390
+ +PT IQ +P A+ + DV+ A TGSGKT F +P++ +LL ++ + T +
Sbjct: 8 FSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVR 67
Query: 391 NLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGG 504
RALI++PTREL +Q ++ + L T L + +I+GG
Sbjct: 68 GPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGG 105
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 64.1 bits (149), Expect = 6e-11
Identities = 39/119 (32%), Positives = 64/119 (53%), Gaps = 1/119 (0%)
Frame = +1
Query: 166 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 345
S F+ L +L+ I G++ P+ +Q + IP A+ G DVV A++G GKTA FV+
Sbjct: 40 SSGFRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITT 99
Query: 346 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF-TGLTSAAILGGESIEQ 519
L++L +P G+ + + + TRELA Q + K+ G+ A GG +I++
Sbjct: 100 LQQL-----EPVDGE-VSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKK 152
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 64.1 bits (149), Expect = 6e-11
Identities = 39/119 (32%), Positives = 64/119 (53%), Gaps = 1/119 (0%)
Frame = +1
Query: 166 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 345
S F+ L +L+ I G++ P+ +Q + IP A+ G DVV A++G GKTA FV+
Sbjct: 40 SSGFRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITT 99
Query: 346 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF-TGLTSAAILGGESIEQ 519
L++L +P G+ + + + TRELA Q + K+ G+ A GG +I++
Sbjct: 100 LQQL-----EPVDGE-VSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKK 152
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 64.1 bits (149), Expect = 6e-11
Identities = 39/119 (32%), Positives = 64/119 (53%), Gaps = 1/119 (0%)
Frame = +1
Query: 166 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 345
S F+ L +L+ I G++ P+ +Q + IP A+ G DVV A++G GKTA FV+
Sbjct: 39 SSGFRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITT 98
Query: 346 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF-TGLTSAAILGGESIEQ 519
L++L +P G+ + + + TRELA Q + K+ G+ A GG +I++
Sbjct: 99 LQQL-----EPVDGE-VSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKK 151
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 64.1 bits (149), Expect = 6e-11
Identities = 32/116 (27%), Positives = 67/116 (57%)
Frame = +1
Query: 163 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 342
S+ F+S+ + L+ + + +P+P+Q + IP+ L G+D++ A++G+GKT F
Sbjct: 20 SNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVF--- 76
Query: 343 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGES 510
+L N + +++ +I++PTRE+++Q VR++ TG ++ +GG +
Sbjct: 77 ---SVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGARTSVYVGGSA 128
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 64.1 bits (149), Expect = 6e-11
Identities = 32/116 (27%), Positives = 67/116 (57%)
Frame = +1
Query: 163 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 342
S+ F+S+ + L+ + + +P+P+Q + IP+ L G+D++ A++G+GKT F
Sbjct: 20 SNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVF--- 76
Query: 343 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGES 510
+L N + +++ +I++PTRE+++Q VR++ TG ++ +GG +
Sbjct: 77 ---SVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGARTSVYVGGSA 128
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 61.7 bits (143), Expect = 3e-10
Identities = 37/107 (34%), Positives = 58/107 (54%)
Frame = +1
Query: 199 PVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVPNNKP 378
P L + + YK T +Q + L DVV + TGSGKT FVLP++ ++ N K
Sbjct: 19 PELLEVFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPMMR--MIQNAKL 76
Query: 379 TPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQ 519
P ++ ALILSP+REL Q + ++ + LT + GG+ +++
Sbjct: 77 QPA-DIGALILSPSRELCSQIVSVIQPFAEKLNLTVETVTGGQKVDK 122
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 60.5 bits (140), Expect = 8e-10
Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Frame = +1
Query: 169 GAFQSMGLSFPVLKGITK-RGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 345
G+F M +L+ + K +G PT IQ + IP+AL+G+D++ +A TGSGKT FVLP+
Sbjct: 189 GSFLEMKFPKSLLEFMQKQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPL 248
Query: 346 LEKLLVPNNK-P-TPGKNLRALILSPTRELALQTLRFVREL 462
+ L K P + LI+ P+RELA Q + E+
Sbjct: 249 VMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLIIEM 289
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 60.1 bits (139), Expect = 1e-09
Identities = 37/93 (39%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Frame = +1
Query: 172 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 351
++ + GL +L+ + + Y IQ IP L G DV+ A T +GKTA F LPI++
Sbjct: 382 SWTNSGLHPTILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPIID 441
Query: 352 KLL----VPNNKPTPGKNLRALILSPTRELALQ 438
K+L NK ALIL+PTRELA Q
Sbjct: 442 KILRMDEETRNKARQDDGPLALILAPTRELAAQ 474
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 55.2 bits (127), Expect = 3e-08
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Frame = +1
Query: 163 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTG--KDVVAMARTGSGKTACFV 336
S +F+ + L VLK + ++ PT IQ +P+ L +++A A++G+GKTA FV
Sbjct: 207 SISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFV 266
Query: 337 LPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF 471
L +L ++ V N P + + L+PT ELA Q V ++GKF
Sbjct: 267 LTMLCRIDV--NLMCP----QCICLAPTLELAKQIGEVVEKMGKF 305
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 55.2 bits (127), Expect = 3e-08
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Frame = +1
Query: 163 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTG--KDVVAMARTGSGKTACFV 336
S +F+ + L VLK + ++ PT IQ +P+ L +++A A++G+GKTA FV
Sbjct: 232 SISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFV 291
Query: 337 LPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF 471
L +L ++ V N P + + L+PT ELA Q V ++GKF
Sbjct: 292 LTMLCRIDV--NLMCP----QCICLAPTLELAKQIGEVVEKMGKF 330
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 55.2 bits (127), Expect = 3e-08
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Frame = +1
Query: 163 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTG--KDVVAMARTGSGKTACFV 336
S +F+ + L VLK + ++ PT IQ +P+ L +++A A++G+GKTA FV
Sbjct: 616 SISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFV 675
Query: 337 LPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF 471
L +L ++ V N P + + L+PT ELA Q V ++GKF
Sbjct: 676 LTMLCRIDV--NLMCP----QCICLAPTLELAKQIGEVVEKMGKF 714
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 50.0 bits (114), Expect = 1e-06
Identities = 28/95 (29%), Positives = 52/95 (54%)
Frame = +1
Query: 184 MGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLV 363
M L +L+GI G+++P+ IQ+ + TGKDV ++ GSGKT ++ IL+ +
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGI-- 58
Query: 364 PNNKPTPGKNLRALILSPTRELALQTLRFVRELGK 468
+L+ ++L+P R +A + ++ LG+
Sbjct: 59 ----DCEDAHLQVILLAPQRGMAQRAHEQLKSLGR 89
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = +1
Query: 172 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 351
AF+ G+ + ++ + PT +Q + IP L G D + A TGSGKT F LPI +
Sbjct: 3 AFEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLPIAQ 62
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/80 (36%), Positives = 42/80 (52%)
Frame = +1
Query: 265 PIALTGKDVVAMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTL 444
P L +DV A TGSGKT C+VLP+L + +KP+ K L+A+IL P + L Q +
Sbjct: 151 PPPLRPRDVAIAAPTGSGKTICYVLPVLAAV---GSKPS--KILQAVILVPVQTLVAQIV 205
Query: 445 RFVRELGKFTGLTSAAILGG 504
+ +G+ L G
Sbjct: 206 DEFKRWNDESGVAKVVSLSG 225
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 34.7 bits (76), Expect = 0.044
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 244 PIQRKTIPIALTGKDVVAMARTGSGKTACFVLPIL 348
P+QR I ++ +D V + TG GK+ C+ LP L
Sbjct: 89 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPAL 123
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 34.7 bits (76), Expect = 0.044
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 244 PIQRKTIPIALTGKDVVAMARTGSGKTACFVLPIL 348
P+QR I ++ +D V + TG GK+ C+ LP L
Sbjct: 112 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPAL 146
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 34.3 bits (75), Expect = 0.059
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +1
Query: 250 QRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSP 417
Q + +AL GK+ + A TGSGKT I E ++ + GK +AL ++P
Sbjct: 297 QEELCQVALQGKNTIVTAPTGSGKTVIAANIIKEHF---ESRSSEGKRFKALFMTP 349
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 34.3 bits (75), Expect = 0.059
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +1
Query: 250 QRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSP 417
Q + +AL GK+ + A TGSGKT I E ++ + GK +AL ++P
Sbjct: 297 QEELCQVALQGKNTIVTAPTGSGKTVIAANIIKEHF---ESRSSEGKRFKALFMTP 349
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 32.7 bits (71), Expect = 0.18
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +1
Query: 250 QRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSP 417
Q + + AL GK+ V +A TGSGKT + L+ + + + GK R ++L P
Sbjct: 375 QEELVQPALEGKNCVIVAPTGSGKTEVAIYAALKHI---EERTSQGKPSRVVLLVP 427
>Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical
protein T04A11.6 protein.
Length = 988
Score = 31.9 bits (69), Expect = 0.31
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1
Query: 217 TKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 342
+K G+ Q Q++ I L G D + TG+GK+ C+ LP
Sbjct: 241 SKFGFNQFRHRQKQCILSTLMGHDTFVLMPTGAGKSLCYQLP 282
>AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase
protein.
Length = 988
Score = 31.9 bits (69), Expect = 0.31
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1
Query: 217 TKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 342
+K G+ Q Q++ I L G D + TG+GK+ C+ LP
Sbjct: 241 SKFGFNQFRHRQKQCILSTLMGHDTFVLMPTGAGKSLCYQLP 282
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 29.1 bits (62), Expect = 2.2
Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 2/99 (2%)
Frame = +1
Query: 226 GYKQPTPIQRKTIPIAL-TGKDVVAMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRA 402
G+K PIQ + + ++V+ A GSGKTA L +L N P +A
Sbjct: 1318 GFKVFNPIQTQVFRTVFESNENVIVCAPNGSGKTAIAELAVLRHF---ENTP----EAKA 1370
Query: 403 LILSPTRELALQTLR-FVRELGKFTGLTSAAILGGESIE 516
+ ++P ++A + + R L G T + G ++++
Sbjct: 1371 VYITPMEDMATKVYADWKRRLEPAIGHTIVLLTGEQTMD 1409
>U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn
(werner's syndrome) relatedprotein 1 protein.
Length = 1056
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 226 GYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPIL 348
G+K Q + L GKD + TG GK+ C+ LP L
Sbjct: 224 GHKGFREKQWDVVRNVLGGKDQFVLMSTGYGKSVCYQLPSL 264
>Z72502-1|CAA96585.2| 430|Caenorhabditis elegans Hypothetical
protein C08B6.2 protein.
Length = 430
Score = 28.3 bits (60), Expect = 3.9
Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = -3
Query: 306 SGHCNNIFPGQCYWYG-LTLYRCW 238
S N IFP + YWYG L Y+CW
Sbjct: 109 SSEWNKIFPIK-YWYGGLKNYKCW 131
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,146,611
Number of Sequences: 27780
Number of extensions: 210819
Number of successful extensions: 567
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 524
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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