Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_C12
         (653 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069606-1|AAL39751.2|  293|Drosophila melanogaster LD36566p pro...   191   6e-49
AE014298-3070|AAF50868.1|  288|Drosophila melanogaster CG1532-PA...   187   1e-47
BT022539-1|AAY54955.1|  161|Drosophila melanogaster IP07874p pro...    29   7.3  

>AY069606-1|AAL39751.2|  293|Drosophila melanogaster LD36566p
           protein.
          Length = 293

 Score =  191 bits (466), Expect = 6e-49
 Identities = 90/165 (54%), Positives = 114/165 (69%), Gaps = 4/165 (2%)
 Frame = +3

Query: 168 LLNSKM--VSGRALHFVFKVADRTLTAKFYREILGMKVLRHEEFSEGCEAACNGPYANRW 341
           L+N+KM  +SGRALH+VFK+ DR   A F+R+ILGM VLRHEEF EGC+AACNGPY NRW
Sbjct: 1   LINTKMSAISGRALHYVFKIGDRAKNAFFFRQILGMTVLRHEEFKEGCDAACNGPYDNRW 60

Query: 342 SKTMVGYGPEDTHFVVELTYNYGVTHYEQGNDFLGITVQSSESLKRAQTNNWPIKEHNGL 521
           SKTMVGYGPE +HFV+ELTYNYGV+ YE GNDF G+T+ S + L RA  +++P+ + +G 
Sbjct: 61  SKTMVGYGPESSHFVIELTYNYGVSSYEMGNDFGGVTIHSKDILSRAAEHSYPVTQVSGK 120

Query: 522 --KYVEAPGGYKFYIXXXXXXXXXXXXXXXSLASSNLAKSIAYWN 650
               + +P GYKFY+                L  SNL  S  YW+
Sbjct: 121 AGSLLTSPDGYKFYV-IDQASASSDPVQSVELNVSNLQNSRKYWH 164


>AE014298-3070|AAF50868.1|  288|Drosophila melanogaster CG1532-PA
           protein.
          Length = 288

 Score =  187 bits (456), Expect = 1e-47
 Identities = 86/157 (54%), Positives = 108/157 (68%), Gaps = 2/157 (1%)
 Frame = +3

Query: 186 VSGRALHFVFKVADRTLTAKFYREILGMKVLRHEEFSEGCEAACNGPYANRWSKTMVGYG 365
           +SGRALH+VFK+ DR   A F+R+ILGM VLRHEEF EGC+AACNGPY NRWSKTMVGYG
Sbjct: 4   ISGRALHYVFKIGDRAKNAFFFRQILGMTVLRHEEFKEGCDAACNGPYDNRWSKTMVGYG 63

Query: 366 PEDTHFVVELTYNYGVTHYEQGNDFLGITVQSSESLKRAQTNNWPIKEHNGL--KYVEAP 539
           PE +HFV+ELTYNYGV+ YE GNDF G+T+ S + L RA  +++P+ + +G     + +P
Sbjct: 64  PESSHFVIELTYNYGVSSYEMGNDFGGVTIHSKDILSRAAEHSYPVTQVSGKAGSLLTSP 123

Query: 540 GGYKFYIXXXXXXXXXXXXXXXSLASSNLAKSIAYWN 650
            GYKFY+                L  SNL  S  YW+
Sbjct: 124 DGYKFYV-IDQASASSDPVQSVELNVSNLQNSRKYWH 159


>BT022539-1|AAY54955.1|  161|Drosophila melanogaster IP07874p
           protein.
          Length = 161

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +3

Query: 204 HFVFKVADRTL-TAKFYREILGMKVLRHEEFSEGCEAACNGPYANRWS 344
           H V    DR L T KF +++   ++  H E S  C+    GP++ ++S
Sbjct: 98  HSVGDRIDRELCTLKFQQQVDESQICVHTETSHACKGDSGGPFSAKFS 145


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,780,708
Number of Sequences: 53049
Number of extensions: 537360
Number of successful extensions: 1044
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1042
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)