Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_C09
(654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73978-2|CAA98292.2| 728|Caenorhabditis elegans Hypothetical pr... 174 4e-44
Z72511-9|CAA96661.2| 223|Caenorhabditis elegans Hypothetical pr... 29 2.9
AL132952-1|CAB61134.2| 214|Caenorhabditis elegans Hypothetical ... 29 3.8
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z66520-9|CAA91390.2| 335|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z66520-4|CAE48504.1| 174|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z32680-2|CAA83597.1| 1218|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z32680-1|CAA83599.1| 1223|Caenorhabditis elegans Hypothetical pr... 28 6.7
U39999-13|AAA81111.1| 320|Caenorhabditis elegans Hypothetical p... 27 8.8
>Z73978-2|CAA98292.2| 728|Caenorhabditis elegans Hypothetical
protein ZC302.1 protein.
Length = 728
Score = 174 bits (424), Expect = 4e-44
Identities = 86/182 (47%), Positives = 123/182 (67%), Gaps = 4/182 (2%)
Frame = +2
Query: 116 DDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSV 295
+D ++IL+A+DIH G+ EN D+ FEEVL +A + VD+ILLGGDLF + PS
Sbjct: 63 EDIIKILVATDIHCGYGENKANIHMDAVNTFEEVLQIATEQKVDMILLGGDLFHENNPSR 122
Query: 296 NCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT----VNYEDPNLNISYPILSIHGNH 463
+ T+++R+YCL P+++E LSD NF+++ VNY D NLN+ PI +IHGNH
Sbjct: 123 EVQHRVTQLLRQYCLNGNPIALEFLSDASVNFNQSVFGHVNYYDQNLNVGLPIFTIHGNH 182
Query: 464 DDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLKDQRL 643
DD G+G +++LD+L +GLVN FGK ++ +SP+LL+KG TRLALYG+ +D RL
Sbjct: 183 DDLSGKG-LTALDLLHESGLVNLFGKHSNIQEFIVSPILLRKGETRLALYGIGSQRDDRL 241
Query: 644 SR 649
R
Sbjct: 242 VR 243
>Z72511-9|CAA96661.2| 223|Caenorhabditis elegans Hypothetical
protein F55A11.8 protein.
Length = 223
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 200 IAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNC 301
+AFEEVL++ +VD + G D+F+ A V+C
Sbjct: 69 VAFEEVLTVQELNEVDAFIYGDDMFEYA--DVHC 100
>AL132952-1|CAB61134.2| 214|Caenorhabditis elegans Hypothetical
protein Y51H4A.1 protein.
Length = 214
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = -1
Query: 309 LNIQLTEGLA*SNRSPPKSIKSTSHCTARDKTSSKAIKLS--SPRTGSFSM 163
+ I++ E + ++P S KSTS C + + S ++I+ S SPR SF +
Sbjct: 88 IQIKVPEVEEDTEKTPAGSPKSTSSCISSEILSEQSIEFSSISPRPSSFPL 138
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical
protein H02I12.1 protein.
Length = 1319
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/66 (25%), Positives = 32/66 (48%)
Frame = +2
Query: 320 IIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSL 499
+ ++YC P ++ ++ Q +F T +DP +SY +I +D S +S
Sbjct: 217 VFQRYC---PPGTVFNINQQSCDFQCTT--DDPTTTVSYSTSTITTPQEDDSEYSSTTSA 271
Query: 500 DILSIT 517
D++S T
Sbjct: 272 DVISTT 277
>Z66520-9|CAA91390.2| 335|Caenorhabditis elegans Hypothetical
protein F49E12.5a protein.
Length = 335
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 98 CRSQSLFYLYNSIMMLSQTTLNTIMPI 18
C S+SL LY S + T+ N I+PI
Sbjct: 11 CASESLLELYRSYKYILSTSFNIIIPI 37
>Z66520-4|CAE48504.1| 174|Caenorhabditis elegans Hypothetical
protein F49E12.5b protein.
Length = 174
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 98 CRSQSLFYLYNSIMMLSQTTLNTIMPI 18
C S+SL LY S + T+ N I+PI
Sbjct: 26 CASESLLELYRSYKYILSTSFNIIIPI 52
>Z32680-2|CAA83597.1| 1218|Caenorhabditis elegans Hypothetical
protein C28A5.2 protein.
Length = 1218
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 359 IELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVN 529
+ L+ ++ RT NY +LN+SY + +P GQ S + +I+ I ++
Sbjct: 515 VRQLASTVREHPRTTNYPSRSLNLSYEVSGALA-RTNPNGQLSAADNNIVLINDSIS 570
>Z32680-1|CAA83599.1| 1223|Caenorhabditis elegans Hypothetical
protein C28A5.1 protein.
Length = 1223
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 359 IELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVN 529
+ L+ ++ RT NY +LN+SY + +P GQ S + +I+ I ++
Sbjct: 515 VRQLASTVREHPRTTNYPSRSLNLSYEVSGALA-RTNPNGQLSAADNNIVLINDSIS 570
>U39999-13|AAA81111.1| 320|Caenorhabditis elegans Hypothetical
protein F41G3.2 protein.
Length = 320
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -1
Query: 219 KTSSKAIKLSSPRTGSFSMKPR*ISEAINILSVSSGDHAEMS 94
++ S+ ++SP S+ M P+ S + N+ S S DH + S
Sbjct: 83 RSRSELALVTSPLPSSYQMSPKKTSPSSNMRSAQSYDHLDNS 124
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,356,025
Number of Sequences: 27780
Number of extensions: 293925
Number of successful extensions: 709
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 707
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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