Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_C05
         (388 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical pr...    62   2e-10
Z71177-9|CAA94868.2|  425|Caenorhabditis elegans Hypothetical pr...    28   2.6  
Z71177-2|CAA94867.1|  425|Caenorhabditis elegans Hypothetical pr...    28   2.6  

>L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical
           protein F54H12.6 protein.
          Length = 213

 Score = 61.7 bits (143), Expect = 2e-10
 Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
 Frame = +1

Query: 94  PRALNDLNQYLAXKSYVSGYTPSQADVQVFEQVGXAP-AANLPXVLRWYNXIASYTSAER 270
           P  L   N  LA +++ +G+  S  D Q+F  +G AP A+  P V RWY  +ASYT AER
Sbjct: 8   PAGLAAFNTTLAEQAFATGFVLSGEDAQLFAALGSAPNASTYPNVARWYANVASYTDAER 67

Query: 271 KTWS 282
           KTW+
Sbjct: 68  KTWA 71


>Z71177-9|CAA94868.2|  425|Caenorhabditis elegans Hypothetical
           protein AC3.4 protein.
          Length = 425

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = -1

Query: 286 PETMFCVQPKCMKQXDYTIVVXGEG*RPAXCQLAQILEHQLEKECIQTRSFXQ 128
           P  + C QP CM   + + VV      PA  Q     + Q +++C+QT+   Q
Sbjct: 124 PAPVQC-QPSCMPACEQSCVVQ----TPAAVQCVPQCQQQCQQQCVQTQPIQQ 171


>Z71177-2|CAA94867.1|  425|Caenorhabditis elegans Hypothetical
           protein AC3.3 protein.
          Length = 425

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = -1

Query: 286 PETMFCVQPKCMKQXDYTIVVXGEG*RPAXCQLAQILEHQLEKECIQTRSFXQ 128
           P  + C QP CM   + + VV      PA  Q     + Q +++C+QT+   Q
Sbjct: 124 PAPVQC-QPSCMPACEQSCVVQ----TPAPVQCVPQCQQQCQQQCVQTQPIQQ 171


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,091,080
Number of Sequences: 27780
Number of extensions: 115874
Number of successful extensions: 271
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 271
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 576961812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)