Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_B13
(655 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC036743-1|AAH36743.1| 655|Homo sapiens ubiquilin 3 protein. 38 0.024
AF230481-1|AAF67143.1| 655|Homo sapiens ubiquilin 3 protein. 38 0.024
AF137396-1|AAG41675.1| 670|Homo sapiens ubiquilin 3 protein. 38 0.024
BC091520-1|AAH91520.1| 791|Homo sapiens IQ motif and ubiquitin ... 34 0.39
BC063841-1|AAH63841.1| 601|Homo sapiens ubiquilin 4 protein. 34 0.51
BC039294-1|AAH39294.1| 589|Homo sapiens ubiquilin 1 protein. 34 0.51
BC018403-1|AAH18403.1| 601|Homo sapiens ubiquilin 4 protein. 34 0.51
BC010066-1|AAH10066.1| 561|Homo sapiens ubiquilin 1 protein. 34 0.51
AL355388-14|CAH72633.1| 601|Homo sapiens ubiquilin 4 protein. 34 0.51
AL355388-13|CAH72634.1| 226|Homo sapiens ubiquilin 4 protein. 34 0.51
AL354920-5|CAI15101.1| 589|Homo sapiens ubiquilin 1 protein. 34 0.51
AL354920-4|CAI15100.1| 561|Homo sapiens ubiquilin 1 protein. 34 0.51
AK074535-1|BAC11045.1| 316|Homo sapiens protein ( Homo sapiens ... 34 0.51
AK023354-1|BAB14539.1| 314|Homo sapiens protein ( Homo sapiens ... 34 0.51
AF293384-1|AAG02473.1| 589|Homo sapiens PLIC-1 protein. 34 0.51
AF188240-1|AAF80171.1| 601|Homo sapiens A1U protein. 34 0.51
AF176069-1|AAD49751.3| 589|Homo sapiens ubiquilin protein. 34 0.51
AB209566-1|BAD92803.1| 600|Homo sapiens ataxin-1 ubiquitin-like... 34 0.51
BC128182-1|AAI28183.1| 421|Homo sapiens IQUB protein protein. 33 0.89
BC128181-1|AAI28182.1| 791|Homo sapiens IQ motif and ubiquitin ... 33 0.89
BC036121-1|AAH36121.1| 791|Homo sapiens IQUB protein protein. 33 0.89
BC026173-1|AAH26173.1| 596|Homo sapiens IQUB protein protein. 33 0.89
AK093153-1|BAC04074.1| 791|Homo sapiens protein ( Homo sapiens ... 33 0.89
BC069237-1|AAH69237.1| 624|Homo sapiens UBQLN2 protein protein. 31 4.7
AL442081-1|CAC09446.1| 588|Homo sapiens hypothetical protein pr... 31 4.7
AL354793-1|CAD13519.1| 624|Homo sapiens ubiquilin 2 protein. 31 4.7
AF293385-1|AAG02474.1| 624|Homo sapiens PLIC-2 protein. 31 4.7
AF189009-1|AAF17237.1| 624|Homo sapiens ubiquitin-like product ... 31 4.7
AB035275-1|BAB20436.1| 589|Homo sapiens DA41 protein. 31 4.7
EF375726-1|ABN46990.1| 465|Homo sapiens parkin 2 protein. 30 8.3
BC022014-1|AAH22014.1| 387|Homo sapiens PARK2 protein protein. 30 8.3
AL445215-2|CAH73682.1| 437|Homo sapiens Parkinson disease (auto... 30 8.3
AL445215-1|CAH73681.1| 465|Homo sapiens Parkinson disease (auto... 30 8.3
AL132982-2|CAI23602.1| 437|Homo sapiens Parkinson disease (auto... 30 8.3
AL132982-1|CAI23601.1| 465|Homo sapiens Parkinson disease (auto... 30 8.3
AL035697-3|CAI21386.1| 437|Homo sapiens Parkinson disease (auto... 30 8.3
AL035697-2|CAI21385.1| 465|Homo sapiens Parkinson disease (auto... 30 8.3
AL035697-1|CAI21384.1| 368|Homo sapiens Parkinson disease (auto... 30 8.3
AB245403-1|BAF43729.1| 465|Homo sapiens parkin 2 protein. 30 8.3
AB009973-1|BAA25751.1| 465|Homo sapiens Parkin protein. 30 8.3
>BC036743-1|AAH36743.1| 655|Homo sapiens ubiquilin 3 protein.
Length = 655
Score = 38.3 bits (85), Expect = 0.024
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +1
Query: 214 TVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVKSG 342
T+ L+ E +R L LI GKILKD +L +CGV+ G
Sbjct: 42 TIQQLKEEISQRFKAHPDQLVLIFAGKILKDPDSLAQCGVRDG 84
>AF230481-1|AAF67143.1| 655|Homo sapiens ubiquilin 3 protein.
Length = 655
Score = 38.3 bits (85), Expect = 0.024
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +1
Query: 214 TVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVKSG 342
T+ L+ E +R L LI GKILKD +L +CGV+ G
Sbjct: 42 TIQQLKEEISQRFKAHPDQLVLIFAGKILKDPDSLAQCGVRDG 84
>AF137396-1|AAG41675.1| 670|Homo sapiens ubiquilin 3 protein.
Length = 670
Score = 38.3 bits (85), Expect = 0.024
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +1
Query: 214 TVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVKSG 342
T+ L+ E +R L LI GKILKD +L +CGV+ G
Sbjct: 57 TIQQLKEEISQRFKAHPDQLVLIFAGKILKDPDSLAQCGVRDG 99
>BC091520-1|AAH91520.1| 791|Homo sapiens IQ motif and ubiquitin
domain containing protein.
Length = 791
Score = 34.3 bits (75), Expect = 0.39
Identities = 22/83 (26%), Positives = 41/83 (49%)
Frame = +1
Query: 100 IKRQSQQEMDNQPCIFLGIKVKPGPIERHKLENFGLENTVDSLRTEAEKRSNVPSSSLEL 279
+K Q+ M++ +KV P+ + + F ++ + L+ +P S L++
Sbjct: 118 VKESLQESMEDS---LATVKVVLIPVGQEIVIPFKVDTILKYLKDHFSHLLGIPHSVLQI 174
Query: 280 IHHGKILKDKATLQECGVKSGEM 348
+ GKILK+ TL + GVK E+
Sbjct: 175 RYSGKILKNNETLVQHGVKPQEI 197
>BC063841-1|AAH63841.1| 601|Homo sapiens ubiquilin 4 protein.
Length = 601
Score = 33.9 bits (74), Expect = 0.51
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +1
Query: 214 TVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVKSG 342
+V + E +R L LI GKILKD TL + G+K G
Sbjct: 33 SVKEFKEEISRRFKAQQDQLVLIFAGKILKDGDTLNQHGIKDG 75
>BC039294-1|AAH39294.1| 589|Homo sapiens ubiquilin 1 protein.
Length = 589
Score = 33.9 bits (74), Expect = 0.51
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 211 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVKSG 342
++V + E KR + L LI GKILKD+ TL + G+ G
Sbjct: 56 SSVQQFKEEISKRFKSHTDQLVLIFAGKILKDQDTLSQHGIHDG 99
>BC018403-1|AAH18403.1| 601|Homo sapiens ubiquilin 4 protein.
Length = 601
Score = 33.9 bits (74), Expect = 0.51
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +1
Query: 214 TVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVKSG 342
+V + E +R L LI GKILKD TL + G+K G
Sbjct: 33 SVKEFKEEISRRFKAQQDQLVLIFAGKILKDGDTLNQHGIKDG 75
>BC010066-1|AAH10066.1| 561|Homo sapiens ubiquilin 1 protein.
Length = 561
Score = 33.9 bits (74), Expect = 0.51
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 211 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVKSG 342
++V + E KR + L LI GKILKD+ TL + G+ G
Sbjct: 56 SSVQQFKEEISKRFKSHTDQLVLIFAGKILKDQDTLSQHGIHDG 99
>AL355388-14|CAH72633.1| 601|Homo sapiens ubiquilin 4 protein.
Length = 601
Score = 33.9 bits (74), Expect = 0.51
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +1
Query: 214 TVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVKSG 342
+V + E +R L LI GKILKD TL + G+K G
Sbjct: 33 SVKEFKEEISRRFKAQQDQLVLIFAGKILKDGDTLNQHGIKDG 75
>AL355388-13|CAH72634.1| 226|Homo sapiens ubiquilin 4 protein.
Length = 226
Score = 33.9 bits (74), Expect = 0.51
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +1
Query: 214 TVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVKSG 342
+V + E +R L LI GKILKD TL + G+K G
Sbjct: 33 SVKEFKEEISRRFKAQQDQLVLIFAGKILKDGDTLNQHGIKDG 75
>AL354920-5|CAI15101.1| 589|Homo sapiens ubiquilin 1 protein.
Length = 589
Score = 33.9 bits (74), Expect = 0.51
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 211 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVKSG 342
++V + E KR + L LI GKILKD+ TL + G+ G
Sbjct: 56 SSVQQFKEEISKRFKSHTDQLVLIFAGKILKDQDTLSQHGIHDG 99
>AL354920-4|CAI15100.1| 561|Homo sapiens ubiquilin 1 protein.
Length = 561
Score = 33.9 bits (74), Expect = 0.51
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 211 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVKSG 342
++V + E KR + L LI GKILKD+ TL + G+ G
Sbjct: 56 SSVQQFKEEISKRFKSHTDQLVLIFAGKILKDQDTLSQHGIHDG 99
>AK074535-1|BAC11045.1| 316|Homo sapiens protein ( Homo sapiens
cDNA FLJ90054 fis, clone HEMBA1002992, weakly similar to
UBIQUITIN-LIKE PROTEIN DSK2. ).
Length = 316
Score = 33.9 bits (74), Expect = 0.51
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 211 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVKSG 342
++V + E KR + L LI GKILKD+ TL + G+ G
Sbjct: 56 SSVQQFKEEISKRFKSHTDQLVLIFAGKILKDQDTLSQHGIHDG 99
>AK023354-1|BAB14539.1| 314|Homo sapiens protein ( Homo sapiens
cDNA FLJ13292 fis, clone OVARC1001180, weakly similar to
UBIQUITIN-LIKE PROTEIN DSK2. ).
Length = 314
Score = 33.9 bits (74), Expect = 0.51
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +1
Query: 214 TVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVKSG 342
+V + E +R L LI GKILKD TL + G+K G
Sbjct: 33 SVKEFKEEISRRFKAQQDQLVLIFAGKILKDGDTLNQHGIKDG 75
>AF293384-1|AAG02473.1| 589|Homo sapiens PLIC-1 protein.
Length = 589
Score = 33.9 bits (74), Expect = 0.51
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 211 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVKSG 342
++V + E KR + L LI GKILKD+ TL + G+ G
Sbjct: 56 SSVQQFKEEISKRFKSHTDQLVLIFAGKILKDQDTLSQHGIHDG 99
>AF188240-1|AAF80171.1| 601|Homo sapiens A1U protein.
Length = 601
Score = 33.9 bits (74), Expect = 0.51
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +1
Query: 214 TVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVKSG 342
+V + E +R L LI GKILKD TL + G+K G
Sbjct: 33 SVKEFKEEISRRFKAQQDQLVLIFAGKILKDGDTLNQHGIKDG 75
>AF176069-1|AAD49751.3| 589|Homo sapiens ubiquilin protein.
Length = 589
Score = 33.9 bits (74), Expect = 0.51
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 211 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVKSG 342
++V + E KR + L LI GKILKD+ TL + G+ G
Sbjct: 56 SSVQQFKEEISKRFKSHTDQLVLIFAGKILKDQDTLSQHGIHDG 99
>AB209566-1|BAD92803.1| 600|Homo sapiens ataxin-1 ubiquitin-like
interacting protein variant protein.
Length = 600
Score = 33.9 bits (74), Expect = 0.51
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +1
Query: 214 TVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVKSG 342
+V + E +R L LI GKILKD TL + G+K G
Sbjct: 32 SVKEFKEEISRRFKAQQDQLVLIFAGKILKDGDTLNQHGIKDG 74
>BC128182-1|AAI28183.1| 421|Homo sapiens IQUB protein protein.
Length = 421
Score = 33.1 bits (72), Expect = 0.89
Identities = 19/65 (29%), Positives = 34/65 (52%)
Frame = +1
Query: 154 IKVKPGPIERHKLENFGLENTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGV 333
+KV P+ + + F ++ + L+ +P S L++ + GKILK+ TL + GV
Sbjct: 133 VKVVLIPVGQEIVIPFKVDTILKYLKDHFSHLLGIPHSVLQIRYSGKILKNNETLVQHGV 192
Query: 334 KSGEM 348
K E+
Sbjct: 193 KPQEI 197
>BC128181-1|AAI28182.1| 791|Homo sapiens IQ motif and ubiquitin
domain containing protein.
Length = 791
Score = 33.1 bits (72), Expect = 0.89
Identities = 19/65 (29%), Positives = 34/65 (52%)
Frame = +1
Query: 154 IKVKPGPIERHKLENFGLENTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGV 333
+KV P+ + + F ++ + L+ +P S L++ + GKILK+ TL + GV
Sbjct: 133 VKVVLIPVGQEIVIPFKVDTILKYLKDHFSHLLGIPHSVLQIRYSGKILKNNETLVQHGV 192
Query: 334 KSGEM 348
K E+
Sbjct: 193 KPQEI 197
>BC036121-1|AAH36121.1| 791|Homo sapiens IQUB protein protein.
Length = 791
Score = 33.1 bits (72), Expect = 0.89
Identities = 19/65 (29%), Positives = 34/65 (52%)
Frame = +1
Query: 154 IKVKPGPIERHKLENFGLENTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGV 333
+KV P+ + + F ++ + L+ +P S L++ + GKILK+ TL + GV
Sbjct: 133 VKVVLIPVGQEIVIPFKVDTILKYLKDHFSHLLGIPHSVLQIRYSGKILKNNETLVQHGV 192
Query: 334 KSGEM 348
K E+
Sbjct: 193 KPQEI 197
>BC026173-1|AAH26173.1| 596|Homo sapiens IQUB protein protein.
Length = 596
Score = 33.1 bits (72), Expect = 0.89
Identities = 19/65 (29%), Positives = 34/65 (52%)
Frame = +1
Query: 154 IKVKPGPIERHKLENFGLENTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGV 333
+KV P+ + + F ++ + L+ +P S L++ + GKILK+ TL + GV
Sbjct: 133 VKVVLIPVGQEIVIPFKVDTILKYLKDHFSHLLGIPHSVLQIRYSGKILKNNETLVQHGV 192
Query: 334 KSGEM 348
K E+
Sbjct: 193 KPQEI 197
>AK093153-1|BAC04074.1| 791|Homo sapiens protein ( Homo sapiens
cDNA FLJ35834 fis, clone TESTI2006615. ).
Length = 791
Score = 33.1 bits (72), Expect = 0.89
Identities = 19/65 (29%), Positives = 34/65 (52%)
Frame = +1
Query: 154 IKVKPGPIERHKLENFGLENTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGV 333
+KV P+ + + F ++ + L+ +P S L++ + GKILK+ TL + GV
Sbjct: 133 VKVVLIPVGQEIVIPFKVDTILKYLKDHFSHLLGIPHSVLQIRYSGKILKNNETLVQHGV 192
Query: 334 KSGEM 348
K E+
Sbjct: 193 KPQEI 197
>BC069237-1|AAH69237.1| 624|Homo sapiens UBQLN2 protein protein.
Length = 624
Score = 30.7 bits (66), Expect = 4.7
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +1
Query: 211 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVKSG 342
++V + KR + L LI GKILKD+ TL + G+ G
Sbjct: 52 SSVQQFKEAISKRFKSQTDQLVLIFAGKILKDQDTLIQHGIHDG 95
>AL442081-1|CAC09446.1| 588|Homo sapiens hypothetical protein
protein.
Length = 588
Score = 30.7 bits (66), Expect = 4.7
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +1
Query: 211 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVKSG 342
++V + KR + L LI GKILKD+ TL + G+ G
Sbjct: 16 SSVQQFKEAISKRFKSQTDQLVLIFAGKILKDQDTLIQHGIHDG 59
>AL354793-1|CAD13519.1| 624|Homo sapiens ubiquilin 2 protein.
Length = 624
Score = 30.7 bits (66), Expect = 4.7
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +1
Query: 211 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVKSG 342
++V + KR + L LI GKILKD+ TL + G+ G
Sbjct: 52 SSVQQFKEAISKRFKSQTDQLVLIFAGKILKDQDTLIQHGIHDG 95
>AF293385-1|AAG02474.1| 624|Homo sapiens PLIC-2 protein.
Length = 624
Score = 30.7 bits (66), Expect = 4.7
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +1
Query: 211 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVKSG 342
++V + KR + L LI GKILKD+ TL + G+ G
Sbjct: 52 SSVQQFKEAISKRFKSQTDQLVLIFAGKILKDQDTLIQHGIHDG 95
>AF189009-1|AAF17237.1| 624|Homo sapiens ubiquitin-like product
Chap1/Dsk2 protein.
Length = 624
Score = 30.7 bits (66), Expect = 4.7
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +1
Query: 211 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVKSG 342
++V + KR + L LI GKILKD+ TL + G+ G
Sbjct: 52 SSVQQFKEAISKRFKSQTDQLVLIFAGKILKDQDTLIQHGIHDG 95
>AB035275-1|BAB20436.1| 589|Homo sapiens DA41 protein.
Length = 589
Score = 30.7 bits (66), Expect = 4.7
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +1
Query: 211 NTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVKSG 342
++V + E KR + L LI GKILKD+ T + G+ G
Sbjct: 56 SSVQQSKEEISKRFKSHTDQLVLIFAGKILKDQDTSSQHGIHDG 99
>EF375726-1|ABN46990.1| 465|Homo sapiens parkin 2 protein.
Length = 465
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 208 ENTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQEC 327
+ ++ L+ KR VP+ L +I GK L++ T+Q C
Sbjct: 20 DTSIFQLKEVVAKRQGVPADQLRVIFAGKELRNDWTVQNC 59
>BC022014-1|AAH22014.1| 387|Homo sapiens PARK2 protein protein.
Length = 387
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 208 ENTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQEC 327
+ ++ L+ KR VP+ L +I GK L++ T+Q C
Sbjct: 20 DTSIFQLKEVVAKRQGVPADQLRVIFAGKELRNDWTVQNC 59
>AL445215-2|CAH73682.1| 437|Homo sapiens Parkinson disease
(autosomal recessive, juvenile)eta protein.
Length = 437
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 208 ENTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQEC 327
+ ++ L+ KR VP+ L +I GK L++ T+Q C
Sbjct: 20 DTSIFQLKEVVAKRQGVPADQLRVIFAGKELRNDWTVQNC 59
>AL445215-1|CAH73681.1| 465|Homo sapiens Parkinson disease
(autosomal recessive, juvenile)ier family 9
(sodium\/hydrogen protein.
Length = 465
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 208 ENTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQEC 327
+ ++ L+ KR VP+ L +I GK L++ T+Q C
Sbjct: 20 DTSIFQLKEVVAKRQGVPADQLRVIFAGKELRNDWTVQNC 59
>AL132982-2|CAI23602.1| 437|Homo sapiens Parkinson disease
(autosomal recessive, juvenile)rate protein.
Length = 437
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 208 ENTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQEC 327
+ ++ L+ KR VP+ L +I GK L++ T+Q C
Sbjct: 20 DTSIFQLKEVVAKRQGVPADQLRVIFAGKELRNDWTVQNC 59
>AL132982-1|CAI23601.1| 465|Homo sapiens Parkinson disease
(autosomal recessive, juvenile)lo2, SUR4/Elo3,
yeast)-like 4 protein.
Length = 465
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 208 ENTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQEC 327
+ ++ L+ KR VP+ L +I GK L++ T+Q C
Sbjct: 20 DTSIFQLKEVVAKRQGVPADQLRVIFAGKELRNDWTVQNC 59
>AL035697-3|CAI21386.1| 437|Homo sapiens Parkinson disease
(autosomal recessive, juvenile)r 1 protein.
Length = 437
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 208 ENTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQEC 327
+ ++ L+ KR VP+ L +I GK L++ T+Q C
Sbjct: 20 DTSIFQLKEVVAKRQGVPADQLRVIFAGKELRNDWTVQNC 59
>AL035697-2|CAI21385.1| 465|Homo sapiens Parkinson disease
(autosomal recessive, juvenile)adenine nucleotide
translocato protein.
Length = 465
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 208 ENTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQEC 327
+ ++ L+ KR VP+ L +I GK L++ T+Q C
Sbjct: 20 DTSIFQLKEVVAKRQGVPADQLRVIFAGKELRNDWTVQNC 59
>AL035697-1|CAI21384.1| 368|Homo sapiens Parkinson disease
(autosomal recessive, juvenile)family, member 1 protein.
Length = 368
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 208 ENTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQEC 327
+ ++ L+ KR VP+ L +I GK L++ T+Q C
Sbjct: 20 DTSIFQLKEVVAKRQGVPADQLRVIFAGKELRNDWTVQNC 59
>AB245403-1|BAF43729.1| 465|Homo sapiens parkin 2 protein.
Length = 465
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 208 ENTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQEC 327
+ ++ L+ KR VP+ L +I GK L++ T+Q C
Sbjct: 20 DTSIFQLKEVVAKRQGVPADQLRVIFAGKELRNDWTVQNC 59
>AB009973-1|BAA25751.1| 465|Homo sapiens Parkin protein.
Length = 465
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 208 ENTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQEC 327
+ ++ L+ KR VP+ L +I GK L++ T+Q C
Sbjct: 20 DTSIFQLKEVVAKRQGVPADQLRVIFAGKELRNDWTVQNC 59
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,479,883
Number of Sequences: 237096
Number of extensions: 1852488
Number of successful extensions: 7280
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 7169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7280
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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