Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_B13
         (655 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118753-1|AAM50613.1|  415|Drosophila melanogaster GH08043p pro...    35   0.084
AE014297-685|AAF54177.1|  415|Drosophila melanogaster CG3223-PA ...    35   0.084
AY118391-1|AAM48420.1|  267|Drosophila melanogaster RE39068p pro...    29   5.5  
AF220044-1|AAF23828.1|  267|Drosophila melanogaster tetraspanin ...    29   5.5  
AE014296-1538|AAN11974.1|  267|Drosophila melanogaster CG4999-PC...    29   5.5  
AE014296-1537|AAN11973.1|  267|Drosophila melanogaster CG4999-PB...    29   5.5  
AE014296-1536|AAF50354.1|  267|Drosophila melanogaster CG4999-PA...    29   5.5  

>AY118753-1|AAM50613.1|  415|Drosophila melanogaster GH08043p
           protein.
          Length = 415

 Score = 35.1 bits (77), Expect = 0.084
 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = +1

Query: 184 HKLENFGLENTVDSLRTEAEKRSNVP--SSSLELIHHGKILKDKATL 318
           H L N  L   V  L+    K  ++   +S LE+IHHG++L+D  TL
Sbjct: 16  HPLHNIDLTRDVAYLKAVVTKEMHLQFDASELEIIHHGRVLEDADTL 62


>AE014297-685|AAF54177.1|  415|Drosophila melanogaster CG3223-PA
           protein.
          Length = 415

 Score = 35.1 bits (77), Expect = 0.084
 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = +1

Query: 184 HKLENFGLENTVDSLRTEAEKRSNVP--SSSLELIHHGKILKDKATL 318
           H L N  L   V  L+    K  ++   +S LE+IHHG++L+D  TL
Sbjct: 16  HPLHNIDLTRDVAYLKAVVTKEMHLQFDASELEIIHHGRVLEDADTL 62


>AY118391-1|AAM48420.1|  267|Drosophila melanogaster RE39068p
           protein.
          Length = 267

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +3

Query: 315 TSRMWSQVW*NGACCEKEDYH 377
           TS MW+Q+  N  CC   DYH
Sbjct: 148 TSLMWNQLMGNFGCCGINDYH 168


>AF220044-1|AAF23828.1|  267|Drosophila melanogaster tetraspanin
           protein.
          Length = 267

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +3

Query: 315 TSRMWSQVW*NGACCEKEDYH 377
           TS MW+Q+  N  CC   DYH
Sbjct: 148 TSLMWNQLMGNFGCCGINDYH 168


>AE014296-1538|AAN11974.1|  267|Drosophila melanogaster CG4999-PC,
           isoform C protein.
          Length = 267

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +3

Query: 315 TSRMWSQVW*NGACCEKEDYH 377
           TS MW+Q+  N  CC   DYH
Sbjct: 148 TSLMWNQLMGNFGCCGINDYH 168


>AE014296-1537|AAN11973.1|  267|Drosophila melanogaster CG4999-PB,
           isoform B protein.
          Length = 267

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +3

Query: 315 TSRMWSQVW*NGACCEKEDYH 377
           TS MW+Q+  N  CC   DYH
Sbjct: 148 TSLMWNQLMGNFGCCGINDYH 168


>AE014296-1536|AAF50354.1|  267|Drosophila melanogaster CG4999-PA,
           isoform A protein.
          Length = 267

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +3

Query: 315 TSRMWSQVW*NGACCEKEDYH 377
           TS MW+Q+  N  CC   DYH
Sbjct: 148 TSLMWNQLMGNFGCCGINDYH 168


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,099,373
Number of Sequences: 53049
Number of extensions: 556191
Number of successful extensions: 1335
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1335
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)