Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_B13
         (655 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical...    31   0.71 
AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical...    31   0.71 
AL032655-1|CAA21726.1|  995|Caenorhabditis elegans Hypothetical ...    30   1.2  
AF039712-3|AAK21400.3|  393|Caenorhabditis elegans Hypothetical ...    28   6.7  

>AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical
           protein C09E7.8b protein.
          Length = 1080

 Score = 31.1 bits (67), Expect = 0.71
 Identities = 16/35 (45%), Positives = 23/35 (65%)
 Frame = +1

Query: 175 IERHKLENFGLENTVDSLRTEAEKRSNVPSSSLEL 279
           IER KL +  LE  +  LRTEA++ + V + SLE+
Sbjct: 742 IEREKLCSKQLEKEISQLRTEADEMNIVMTQSLEM 776


>AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical
           protein C09E7.8a protein.
          Length = 1114

 Score = 31.1 bits (67), Expect = 0.71
 Identities = 16/35 (45%), Positives = 23/35 (65%)
 Frame = +1

Query: 175 IERHKLENFGLENTVDSLRTEAEKRSNVPSSSLEL 279
           IER KL +  LE  +  LRTEA++ + V + SLE+
Sbjct: 776 IEREKLCSKQLEKEISQLRTEADEMNIVMTQSLEM 810


>AL032655-1|CAA21726.1|  995|Caenorhabditis elegans Hypothetical
           protein Y6B3B.3 protein.
          Length = 995

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +1

Query: 7   MLKIVKNNAFLQVTKIIFFRIYCFFNY 87
           +LK +KN  FL++   +FF   CFF++
Sbjct: 168 LLKDIKNKFFLRIILRVFFHFTCFFSH 194


>AF039712-3|AAK21400.3|  393|Caenorhabditis elegans Hypothetical
           protein F54D7.2 protein.
          Length = 393

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = -2

Query: 243 FSLSSKRIYCILESKIL*FVTFYWSRFHFYTQKYAW 136
           FS+SS  + C+L S  + F T +W +++      +W
Sbjct: 159 FSISSVELLCVLISTQIVFFTTHWEKYNTGIMFLSW 194


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,442,957
Number of Sequences: 27780
Number of extensions: 288166
Number of successful extensions: 660
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)