Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_B10
         (654 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF040643-1|AAB94960.1|  998|Caenorhabditis elegans Hypothetical ...    28   6.7  
AF000191-2|AAB52883.2|  341|Caenorhabditis elegans Hypothetical ...    27   8.8  

>AF040643-1|AAB94960.1|  998|Caenorhabditis elegans Hypothetical
           protein F14D2.6 protein.
          Length = 998

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = -3

Query: 466 CIFRKM*ILLFENSHVCMYIF*NLVSYEGNGYFNDTKVVCGKHRYGFF 323
           CIF+ + +L  +  H+   IF N  + E      +TKV+CG   +GFF
Sbjct: 333 CIFKDLSMLDPKCQHIIGDIFINATNEEYILNLKNTKVICG---FGFF 377


>AF000191-2|AAB52883.2|  341|Caenorhabditis elegans Hypothetical
           protein T23C6.4 protein.
          Length = 341

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -2

Query: 218 NFYDYTNDNTTYQ 180
           NF DYTN+ TTYQ
Sbjct: 250 NFIDYTNNGTTYQ 262


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,366,616
Number of Sequences: 27780
Number of extensions: 264203
Number of successful extensions: 527
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 527
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)