Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_B09
(654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006665-4|AAF39906.1| 211|Caenorhabditis elegans Hypothetical ... 270 6e-73
AC006712-4|ABD63214.1| 166|Caenorhabditis elegans Hypothetical ... 30 1.2
AL032640-5|CAA21644.1| 475|Caenorhabditis elegans Hypothetical ... 28 5.0
AF003148-4|AAR25646.1| 301|Caenorhabditis elegans Hypothetical ... 28 5.0
AF003148-2|AAR25645.1| 400|Caenorhabditis elegans Hypothetical ... 28 5.0
AF003148-1|AAR25644.1| 432|Caenorhabditis elegans Hypothetical ... 28 5.0
Z67990-5|CAA91936.2| 638|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical pr... 27 8.8
AB012617-1|BAA33488.1| 638|Caenorhabditis elegans FLR-1 protein. 27 8.8
>AC006665-4|AAF39906.1| 211|Caenorhabditis elegans Hypothetical
protein H27M09.2 protein.
Length = 211
Score = 270 bits (662), Expect = 6e-73
Identities = 121/160 (75%), Positives = 143/160 (89%)
Frame = +2
Query: 119 DDDAETYKLWRIRKTVMQLCHDRGYLVTQDELDQTLEQFKEQFGDKPSEKRPARSDLIVL 298
DD+ ETY+LWRIRKTV+Q+ HDRGYLV QDELDQ LE FK Q+GD+PSEK+PARSDL +L
Sbjct: 3 DDELETYRLWRIRKTVLQMVHDRGYLVAQDELDQPLETFKVQYGDRPSEKKPARSDLTIL 62
Query: 299 VAHNDDPTDQMFVFFPDEAKIGIKTIKTYCTRMQEENIHRAIVVVQAGMSPSAKQSLVDM 478
VAHNDDP DQMFVFFP++AKIGIKTIK C +MQE+NI RAI+VVQ GM+PSAKQS+ DM
Sbjct: 63 VAHNDDPADQMFVFFPEDAKIGIKTIKAICQQMQEQNISRAIIVVQTGMTPSAKQSIGDM 122
Query: 479 APKYILEQFLESELLINITEHELVPEHIVLTPDEKQELLA 598
APKY+LE FLE+EL++NITEHELVPEH+V+T +EK ELLA
Sbjct: 123 APKYMLEHFLEAELMVNITEHELVPEHVVMTAEEKAELLA 162
Score = 33.9 bits (74), Expect = 0.10
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +1
Query: 580 KARTLGRYKLKENMLMRIQAGDPVA 654
KA L RYKLK++ L RIQ DPVA
Sbjct: 157 KAELLARYKLKDSQLPRIQQCDPVA 181
>AC006712-4|ABD63214.1| 166|Caenorhabditis elegans Hypothetical
protein Y119C1B.12 protein.
Length = 166
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Frame = -1
Query: 492 MYLGAISTSDCLADGDIPAWTTTIAL*IFSSCIL---VQY 382
+Y+G S +C+ D IP W IA +F IL VQY
Sbjct: 43 LYVGISSIGNCMVDERIPVWLICIASGLFLQLILEAVVQY 82
>AL032640-5|CAA21644.1| 475|Caenorhabditis elegans Hypothetical
protein Y43F8A.5 protein.
Length = 475
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -3
Query: 640 LLVFSSTCSLSAYICQEFLLFIRCQHNMFRYQLVFGYI 527
+L FS CS A+I +LF +H F FGY+
Sbjct: 245 ILYFSFACSYFAFIGSTRILFFYLKHRFFWGAEEFGYL 282
>AF003148-4|AAR25646.1| 301|Caenorhabditis elegans Hypothetical
protein F32B5.6d protein.
Length = 301
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +2
Query: 401 EENIHRAIVVVQAGMSPSAKQSLVDMAPKY---ILEQFLESELLINITEHELVPEHIVLT 571
E I + ++ +QA M PS + L+ ++ KY IL+ + L+ I + P+ +V
Sbjct: 159 ERFICQKVIEIQADMDPSFAKKLLLVSEKYNLEILKMVINGFLVDQIIGNSNPPKELVNI 218
Query: 572 PDEKQELLADI 604
E Q++ +I
Sbjct: 219 THELQQMAHEI 229
>AF003148-2|AAR25645.1| 400|Caenorhabditis elegans Hypothetical
protein F32B5.6b protein.
Length = 400
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +2
Query: 401 EENIHRAIVVVQAGMSPSAKQSLVDMAPKY---ILEQFLESELLINITEHELVPEHIVLT 571
E I + ++ +QA M PS + L+ ++ KY IL+ + L+ I + P+ +V
Sbjct: 290 ERFICQKVIEIQADMDPSFAKKLLLVSEKYNLEILKMVINGFLVDQIIGNSNPPKELVNI 349
Query: 572 PDEKQELLADI 604
E Q++ +I
Sbjct: 350 THELQQMAHEI 360
>AF003148-1|AAR25644.1| 432|Caenorhabditis elegans Hypothetical
protein F32B5.6a protein.
Length = 432
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +2
Query: 401 EENIHRAIVVVQAGMSPSAKQSLVDMAPKY---ILEQFLESELLINITEHELVPEHIVLT 571
E I + ++ +QA M PS + L+ ++ KY IL+ + L+ I + P+ +V
Sbjct: 290 ERFICQKVIEIQADMDPSFAKKLLLVSEKYNLEILKMVINGFLVDQIIGNSNPPKELVNI 349
Query: 572 PDEKQELLADI 604
E Q++ +I
Sbjct: 350 THELQQMAHEI 360
>Z67990-5|CAA91936.2| 638|Caenorhabditis elegans Hypothetical
protein F02D10.5 protein.
Length = 638
Score = 27.5 bits (58), Expect = 8.8
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +2
Query: 236 KEQFGDKPSEKRPARSDLIVLVAH--NDDPTDQMFVFFPD-EAKIGIKTIKTYCTRMQEE 406
++QF D +E+ RS+ IV++ + NDD DQ FP + K+ +I + R
Sbjct: 464 QQQFVDAVAEEEKERSESIVIIQNGRNDDMDDQKPSRFPGADRKLSGNSIHIHLDRRNSR 523
Query: 407 NI 412
I
Sbjct: 524 MI 525
>Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical
protein ZK632.6 protein.
Length = 619
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/56 (28%), Positives = 24/56 (42%)
Frame = +2
Query: 215 DQTLEQFKEQFGDKPSEKRPARSDLIVLVAHNDDPTDQMFVFFPDEAKIGIKTIKT 382
D E +E+ +K L V +D T F +FP +KIG+ IK+
Sbjct: 23 DDVFEDDEEEVTKGSDDKEEFVPSLFVAPKLSDKSTPNFFDYFPVGSKIGLTWIKS 78
>AB012617-1|BAA33488.1| 638|Caenorhabditis elegans FLR-1 protein.
Length = 638
Score = 27.5 bits (58), Expect = 8.8
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +2
Query: 236 KEQFGDKPSEKRPARSDLIVLVAH--NDDPTDQMFVFFPD-EAKIGIKTIKTYCTRMQEE 406
++QF D +E+ RS+ IV++ + NDD DQ FP + K+ +I + R
Sbjct: 464 QQQFVDAVAEEEKERSESIVIIQNGRNDDMDDQKPSRFPGADRKLSGNSIHIHLDRRNSR 523
Query: 407 NI 412
I
Sbjct: 524 MI 525
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,438,310
Number of Sequences: 27780
Number of extensions: 339570
Number of successful extensions: 929
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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