Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_B07
         (649 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2626|ABC66134.1|  270|Drosophila melanogaster CG33258-P...    31   1.0  
BT024209-1|ABC86271.1|  480|Drosophila melanogaster RE32713p pro...    29   7.2  
AY217746-1|AAP45004.1|  480|Drosophila melanogaster peptide rece...    29   7.2  
AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse tran...    28   9.5  

>AE014296-2626|ABC66134.1|  270|Drosophila melanogaster CG33258-PA
           protein.
          Length = 270

 Score = 31.5 bits (68), Expect = 1.0
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +3

Query: 414 SNMYCCDNERYVELSVXERAYSNVCAAVSVVGMIDIRKT 530
           SN+Y CD +        E+ Y N+C    V+  +D+R T
Sbjct: 135 SNIYDCDTDEICSSEALEK-YDNICTPSCVLDFLDVRAT 172


>BT024209-1|ABC86271.1|  480|Drosophila melanogaster RE32713p
           protein.
          Length = 480

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -2

Query: 129 VVHAQPHDVEQSEASQEHQVNN 64
           V + Q  D EQ + SQ+HQ+NN
Sbjct: 312 VANRQTDDQEQQQQSQQHQINN 333


>AY217746-1|AAP45004.1|  480|Drosophila melanogaster peptide
           receptor GPCR protein.
          Length = 480

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -2

Query: 129 VVHAQPHDVEQSEASQEHQVNN 64
           V + Q  D EQ + SQ+HQ+NN
Sbjct: 312 VANRQTDDQEQQQQSQQHQINN 333


>AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse
           transcriptase protein.
          Length = 1217

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
 Frame = +3

Query: 339 LKSNKNSRVLKLYSETKMIFE---NFGHSNMYCCDNERYVELSVXERAY--SNVCAAVSV 503
           L +N+ S++  + + +K+I        H   YCC  +   ELS+ E  Y  +N  A V +
Sbjct: 161 LYTNQASKIFNIPAYSKVILPLPVKTNHGEFYCCTTQLNNELSLSEGLYKSNNNIANVEI 220

Query: 504 VGMIDIRKTSMLISMLASI 560
               D  K   L   L +I
Sbjct: 221 SNQSDSDKLLYLEYPLETI 239


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,215,934
Number of Sequences: 53049
Number of extensions: 432809
Number of successful extensions: 975
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 974
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)