Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_B01
(646 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006651-11|AAM48540.1| 428|Caenorhabditis elegans Hypothetical... 38 0.008
AC006651-10|AAF39866.2| 456|Caenorhabditis elegans Hypothetical... 38 0.008
AC006651-12|AAM48541.1| 231|Caenorhabditis elegans Hypothetical... 30 1.2
Z66511-3|CAC42276.1| 712|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z66511-2|CAA91315.1| 725|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 29 2.8
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 29 2.8
AL032631-9|CAA21575.2| 893|Caenorhabditis elegans Hypothetical ... 29 2.8
AF098985-1|AAC67419.2| 882|Caenorhabditis elegans Hypothetical ... 29 2.8
Z93388-3|CAB07655.1| 230|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical pr... 28 4.9
U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protei... 28 4.9
AF016657-5|AAB93661.3| 278|Caenorhabditis elegans Hypothetical ... 28 6.5
Z99169-2|CAB16307.1| 1334|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z96048-3|CAB09418.1| 733|Caenorhabditis elegans Hypothetical pr... 27 8.6
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 27 8.6
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 27 8.6
>AC006651-11|AAM48540.1| 428|Caenorhabditis elegans Hypothetical
protein H06I04.1b protein.
Length = 428
Score = 37.5 bits (83), Expect = 0.008
Identities = 35/148 (23%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Frame = +2
Query: 170 DDAQSVQTKRTNMATKQSSVADTRAELAELVKRKAEVAETLANLERQIYAFEGSYLEDTQ 349
D + V++ R+ +Q +A+ E+ L++ K E+ LE++ + + E +
Sbjct: 176 DLEKEVRSGRSRFLEQQELLAEMSREMDILLREKLEMQRNSQELEKKYKKAKFASRELAK 235
Query: 350 LYGNIIRGWDRYLTTNKSTNSKADKRNRKFKEAERLFSKSSITSMAAVSG-------LVD 508
+ N + G TT+ N ++D +F E + LF KS S + +D
Sbjct: 236 ILENDLCGTP---TTSNLKNFESDD---EFFEEKSLFEKSRALSRQQIPNDLLEKTRKID 289
Query: 509 AAEAKNERNSETESQTNEDSSDTQISSN 592
+EAKN +N + + +++ + QIS N
Sbjct: 290 FSEAKNAKNQDLIDKLIDENENLQISLN 317
>AC006651-10|AAF39866.2| 456|Caenorhabditis elegans Hypothetical
protein H06I04.1a protein.
Length = 456
Score = 37.5 bits (83), Expect = 0.008
Identities = 35/148 (23%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Frame = +2
Query: 170 DDAQSVQTKRTNMATKQSSVADTRAELAELVKRKAEVAETLANLERQIYAFEGSYLEDTQ 349
D + V++ R+ +Q +A+ E+ L++ K E+ LE++ + + E +
Sbjct: 176 DLEKEVRSGRSRFLEQQELLAEMSREMDILLREKLEMQRNSQELEKKYKKAKFASRELAK 235
Query: 350 LYGNIIRGWDRYLTTNKSTNSKADKRNRKFKEAERLFSKSSITSMAAVSG-------LVD 508
+ N + G TT+ N ++D +F E + LF KS S + +D
Sbjct: 236 ILENDLCGTP---TTSNLKNFESDD---EFFEEKSLFEKSRALSRQQIPNDLLEKTRKID 289
Query: 509 AAEAKNERNSETESQTNEDSSDTQISSN 592
+EAKN +N + + +++ + QIS N
Sbjct: 290 FSEAKNAKNQDLIDKLIDENENLQISLN 317
>AC006651-12|AAM48541.1| 231|Caenorhabditis elegans Hypothetical
protein H06I04.1c protein.
Length = 231
Score = 30.3 bits (65), Expect = 1.2
Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 7/123 (5%)
Frame = +2
Query: 245 ELAELVKRKAEVAETLANLERQIYAFEGSYLEDTQLYGNIIRGWDRYLTTNKSTNSKADK 424
E+ L++ K E+ LE++ + + E ++ N + G TT+ N ++D
Sbjct: 4 EMDILLREKLEMQRNSQELEKKYKKAKFASRELAKILENDLCGTP---TTSNLKNFESDD 60
Query: 425 RNRKFKEAERLFSKSSITSMAAVSG-------LVDAAEAKNERNSETESQTNEDSSDTQI 583
+F E + LF KS S + +D +EAKN +N + + +++ + QI
Sbjct: 61 ---EFFEEKSLFEKSRALSRQQIPNDLLEKTRKIDFSEAKNAKNQDLIDKLIDENENLQI 117
Query: 584 SSN 592
S N
Sbjct: 118 SLN 120
>Z66511-3|CAC42276.1| 712|Caenorhabditis elegans Hypothetical
protein F07A11.2b protein.
Length = 712
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/47 (25%), Positives = 27/47 (57%)
Frame = +2
Query: 176 AQSVQTKRTNMATKQSSVADTRAELAELVKRKAEVAETLANLERQIY 316
A ++ R +MA ++ + D +L EL++ ++ E + ++ +QIY
Sbjct: 519 ALTLSDDRISMAKRREEIIDALNDLPELIREVLQLDEKVLDIAKQIY 565
>Z66511-2|CAA91315.1| 725|Caenorhabditis elegans Hypothetical
protein F07A11.2a protein.
Length = 725
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/47 (25%), Positives = 27/47 (57%)
Frame = +2
Query: 176 AQSVQTKRTNMATKQSSVADTRAELAELVKRKAEVAETLANLERQIY 316
A ++ R +MA ++ + D +L EL++ ++ E + ++ +QIY
Sbjct: 532 ALTLSDDRISMAKRREEIIDALNDLPELIREVLQLDEKVLDIAKQIY 578
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/65 (21%), Positives = 36/65 (55%)
Frame = +2
Query: 386 LTTNKSTNSKADKRNRKFKEAERLFSKSSITSMAAVSGLVDAAEAKNERNSETESQTNED 565
L T K+ + A++RN K + + + ++ ++G ++ + +NE + + +T+++
Sbjct: 904 LETEKANLADAEERNEKLNQLKATLE----SKLSDITGQLEDMQERNEDLARQKKKTDQE 959
Query: 566 SSDTQ 580
SDT+
Sbjct: 960 LSDTK 964
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/65 (21%), Positives = 36/65 (55%)
Frame = +2
Query: 386 LTTNKSTNSKADKRNRKFKEAERLFSKSSITSMAAVSGLVDAAEAKNERNSETESQTNED 565
L T K+ + A++RN K + + + ++ ++G ++ + +NE + + +T+++
Sbjct: 904 LETEKANLADAEERNEKLNQLKATLE----SKLSDITGQLEDMQERNEDLARQKKKTDQE 959
Query: 566 SSDTQ 580
SDT+
Sbjct: 960 LSDTK 964
>AL032631-9|CAA21575.2| 893|Caenorhabditis elegans Hypothetical
protein Y106G6H.7 protein.
Length = 893
Score = 29.1 bits (62), Expect = 2.8
Identities = 32/150 (21%), Positives = 66/150 (44%), Gaps = 11/150 (7%)
Frame = +2
Query: 104 LWNYKTQVTTIISMVISPQSPIDDAQSVQTKRTNMATKQS--SVADTRAELAELVKRKAE 277
LW+ Q ++ ++ + +++ + +K N+ +K+ ADT E EL+ +
Sbjct: 123 LWHENAQQKSVCEIM----AKLEELREAPSKIENLISKEQYQQAADTVTESRELINGRLS 178
Query: 278 VAETLANLERQIYAFEGSYLE---DTQLYGNIIRGWDRYLTTNKST------NSKADKRN 430
E L++L +I F ++ DT + ++ ++++L T N A +
Sbjct: 179 RVEGLSHLSAEIERFTKILIDKINDTLVNMLVVEPFEKHLLHIVRTIPEHRINQNAYCHS 238
Query: 431 RKFKEAERLFSKSSITSMAAVSGLVDAAEA 520
K S SS + ++A S +V + EA
Sbjct: 239 LSTKSRSGSGSVSSFSDVSAKSRIVSSVEA 268
>AF098985-1|AAC67419.2| 882|Caenorhabditis elegans Hypothetical
protein C08G5.1 protein.
Length = 882
Score = 29.1 bits (62), Expect = 2.8
Identities = 27/117 (23%), Positives = 54/117 (46%), Gaps = 10/117 (8%)
Frame = +2
Query: 179 QSVQTKRTNMATKQSSVADTRAELAELVKRKAEVAETLANL--ERQIYAFEGSYL----- 337
Q+V ++N+ Q ++ D+ + LAE +K V ETL NL RQ+ + +L
Sbjct: 284 QNVTVDKSNLEAVQKNL-DSLSSLAEDLKTNLHVIETLYNLFVTRQLPIPDSKFLAGFPK 342
Query: 338 ---EDTQLYGNIIRGWDRYLTTNKSTNSKADKRNRKFKEAERLFSKSSITSMAAVSG 499
+ + ++ ++ GW N++ +AD + + + L +K+ + SG
Sbjct: 343 GISDISMIFTDLFTGW-----VNETVAGQADNLGKALNQLKTLANKAENVDKSFQSG 394
>Z93388-3|CAB07655.1| 230|Caenorhabditis elegans Hypothetical
protein T10C6.5 protein.
Length = 230
Score = 28.3 bits (60), Expect = 4.9
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +2
Query: 395 NKSTNSKADKRNRKFKEAERLFSKSS-ITSMAAVSGL-VDAAEAKNERNSETESQTNEDS 568
+K N+ +KR R + SK + +AA S VDA EA +E NS + ++ED
Sbjct: 65 DKERNAIREKRARDSASSSSSHSKRQRMDQIAAESAASVDADEAVDELNSSDDDDSDEDD 124
Query: 569 S 571
+
Sbjct: 125 T 125
>Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical protein
F25C8.3b protein.
Length = 3175
Score = 28.3 bits (60), Expect = 4.9
Identities = 27/119 (22%), Positives = 50/119 (42%), Gaps = 3/119 (2%)
Frame = +2
Query: 179 QSVQTKRTNMATKQSSVADTRA---ELAELVKRKAEVAETLANLERQIYAFEGSYLEDTQ 349
+ + K AT Q+ + TR + E+VKR AE + +RQ++ S +
Sbjct: 1828 EELSLKEEEHATSQTIMTMTRTRRKQKQEMVKRAVREAEERQSEQRQLFRLRSSAIVSLA 1887
Query: 350 LYGNIIRGWDRYLTTNKSTNSKADKRNRKFKEAERLFSKSSITSMAAVSGLVDAAEAKN 526
Y + + T +S NS R+ A+ LF + ++ + + L+D + N
Sbjct: 1888 AYEPALFHHQQE-QTEESDNSHQHARH-VMPVAQPLFPSALLSVVPQIIELLDDPQVDN 1944
>Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical protein
F25C8.3a protein.
Length = 3184
Score = 28.3 bits (60), Expect = 4.9
Identities = 27/119 (22%), Positives = 50/119 (42%), Gaps = 3/119 (2%)
Frame = +2
Query: 179 QSVQTKRTNMATKQSSVADTRA---ELAELVKRKAEVAETLANLERQIYAFEGSYLEDTQ 349
+ + K AT Q+ + TR + E+VKR AE + +RQ++ S +
Sbjct: 1837 EELSLKEEEHATSQTIMTMTRTRRKQKQEMVKRAVREAEERQSEQRQLFRLRSSAIVSLA 1896
Query: 350 LYGNIIRGWDRYLTTNKSTNSKADKRNRKFKEAERLFSKSSITSMAAVSGLVDAAEAKN 526
Y + + T +S NS R+ A+ LF + ++ + + L+D + N
Sbjct: 1897 AYEPALFHHQQE-QTEESDNSHQHARH-VMPVAQPLFPSALLSVVPQIIELLDDPQVDN 1953
>U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protein 1
protein.
Length = 2427
Score = 28.3 bits (60), Expect = 4.9
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = +2
Query: 206 MATKQSSV-ADTRAELAELVKRKAEVAETLANLERQIYAFEGSYLEDTQLYGNIIRGWDR 382
+ TKQ + A A E ++R E+ + L + E Q + +E + + N+I+ W
Sbjct: 1974 LLTKQEAFDAGLNAFEHEGIQRITELKDQLVSSEHQ----QSPAIE--KRHTNVIQRWQN 2027
Query: 383 YLTTNKSTNSKADKRNRKFKEAERLF 460
L +++ K K ++FK+ E L+
Sbjct: 2028 LLAHSEARRQKLLKMQQQFKQIEELY 2053
>AF016657-5|AAB93661.3| 278|Caenorhabditis elegans Hypothetical
protein C16C4.4 protein.
Length = 278
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Frame = +2
Query: 506 DAAEAKNERNSETESQTNEDSSDTQISSN-----LNLGGLNHT 619
D + ++NE + +ES + DSS + +N+GG N+T
Sbjct: 232 DESSSENEEDDSSESHSENDSSSDNLEDEFSECVINVGGQNYT 274
>Z99169-2|CAB16307.1| 1334|Caenorhabditis elegans Hypothetical
protein C26H9A.2 protein.
Length = 1334
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = -2
Query: 366 IIFPYN*VSSRYDPSNA*I*RSKFAKVSATSAFRLTNSASSALVSATED 220
IIF +S R++PSNA ++ S TS RLT+ + + V + E+
Sbjct: 698 IIFKVFTLSMRFEPSNAKYFSTEITWDSITSLLRLTSIFNESTVISIEE 746
>Z96048-3|CAB09418.1| 733|Caenorhabditis elegans Hypothetical
protein F57A10.3 protein.
Length = 733
Score = 27.5 bits (58), Expect = 8.6
Identities = 27/104 (25%), Positives = 40/104 (38%), Gaps = 2/104 (1%)
Frame = +2
Query: 140 SMVISPQSPIDDAQSVQTKRTNMATKQSSVADTRA--ELAELVKRKAEVAETLANLERQI 313
S +I + + V+TKR + K +S D +A LA K + + + + I
Sbjct: 108 STLIKSKQAFRNVSVVETKRESYKLKNASWKDLKAILSLAGPYKWRIMLGISFLGISSSI 167
Query: 314 YAFEGSYLEDTQLYGNIIRGWDRYLTTNKSTNSKADKRNRKFKE 445
+ F L G +I WD N KA R FKE
Sbjct: 168 FLFTPRVL------GKLIDEWDETKQDKMDPNDKALLLARFFKE 205
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.5 bits (58), Expect = 8.6
Identities = 34/152 (22%), Positives = 70/152 (46%), Gaps = 3/152 (1%)
Frame = +2
Query: 116 KTQVTTIISMVISPQSPIDDAQSVQTKRTNMATKQSSVADTRAELAELVKRKA---EVAE 286
KT+ T + S Q ++ + + + A++ ++ A + ++VK+K + E
Sbjct: 15034 KTEKKTDAAKSESEQKSAEEIVAEKQVDQSQASESTTEAVEEKKTKKVVKKKVAENKGEE 15093
Query: 287 TLANLERQIYAFEGSYLEDTQLYGNIIRGWDRYLTTNKSTNSKADKRNRKFKEAERLFSK 466
TL ++ ++ +G +E Q RG + + N+S + ++KR+ E E+ K
Sbjct: 15094 TLQEVKEKLK--KGKAVEKVQDESR--RGSLQASSDNESVTTTSEKRSEA--ELEKNSEK 15147
Query: 467 SSITSMAAVSGLVDAAEAKNERNSETESQTNE 562
S+ + S ++AA+ SET +T E
Sbjct: 15148 SA--EKKSTSADLEAADKAETEKSETGKETTE 15177
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.5 bits (58), Expect = 8.6
Identities = 34/152 (22%), Positives = 70/152 (46%), Gaps = 3/152 (1%)
Frame = +2
Query: 116 KTQVTTIISMVISPQSPIDDAQSVQTKRTNMATKQSSVADTRAELAELVKRKA---EVAE 286
KT+ T + S Q ++ + + + A++ ++ A + ++VK+K + E
Sbjct: 15034 KTEKKTDAAKSESEQKSAEEIVAEKQVDQSQASESTTEAVEEKKTKKVVKKKVAENKGEE 15093
Query: 287 TLANLERQIYAFEGSYLEDTQLYGNIIRGWDRYLTTNKSTNSKADKRNRKFKEAERLFSK 466
TL ++ ++ +G +E Q RG + + N+S + ++KR+ E E+ K
Sbjct: 15094 TLQEVKEKLK--KGKAVEKVQDESR--RGSLQASSDNESVTTTSEKRSEA--ELEKNSEK 15147
Query: 467 SSITSMAAVSGLVDAAEAKNERNSETESQTNE 562
S+ + S ++AA+ SET +T E
Sbjct: 15148 SA--EKKSTSADLEAADKAETEKSETGKETTE 15177
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,589,525
Number of Sequences: 27780
Number of extensions: 219421
Number of successful extensions: 709
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 706
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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