Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_A07
         (618 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X64707-1|CAA45963.1|  211|Homo sapiens BBC1 protein.                  111   2e-24
BC106058-1|AAI06059.1|  211|Homo sapiens ribosomal protein L13 p...   111   2e-24
BC093063-1|AAH93063.1|  211|Homo sapiens RPL13 protein protein.       111   2e-24
BC063378-1|AAH63378.1|  211|Homo sapiens ribosomal protein L13 p...   111   2e-24
BC027463-1|AAH27463.1|  211|Homo sapiens ribosomal protein L13 p...   111   2e-24
BC020804-1|AAH20804.1|  211|Homo sapiens RPL13 protein protein.       111   2e-24
BC014167-1|AAH14167.1|  211|Homo sapiens ribosomal protein L13 p...   111   2e-24
BC013078-1|AAH13078.1|  211|Homo sapiens ribosomal protein L13 p...   111   2e-24
BC010994-1|AAH10994.1|  211|Homo sapiens ribosomal protein L13 p...   111   2e-24
BC007805-1|AAH07805.1|  211|Homo sapiens ribosomal protein L13 p...   111   2e-24
BC007563-1|AAH07563.1|  211|Homo sapiens ribosomal protein L13 p...   111   2e-24
BC007345-1|AAH07345.1|  211|Homo sapiens ribosomal protein L13 p...   111   2e-24
BC004954-1|AAH04954.1|  211|Homo sapiens RPL13 protein protein.       111   2e-24
AB062392-1|BAB93479.1|  211|Homo sapiens ribosomal protein L13 p...   111   2e-24
BC066320-1|AAH66320.1|  211|Homo sapiens ribosomal protein L13 p...   108   2e-23
AB007172-1|BAA25832.1|   65|Homo sapiens ribosomal protein L13 p...    57   4e-08

>X64707-1|CAA45963.1|  211|Homo sapiens BBC1 protein.
          Length = 211

 Score =  111 bits (267), Expect = 2e-24
 Identities = 51/84 (60%), Positives = 60/84 (71%)
 Frame = +3

Query: 96  WQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFT 275
           WQR V TWFNQPAR+ RR++ R               +RPIVRCPTVRYHTKVRAGRGF+
Sbjct: 18  WQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFS 77

Query: 276 LREIRAAGLNPVFARTIGIAVDPR 347
           L E+R AG++   ARTIGI+VDPR
Sbjct: 78  LEELRVAGIHKKVARTIGISVDPR 101



 Score =  108 bits (259), Expect = 2e-23
 Identities = 57/92 (61%), Positives = 69/92 (75%), Gaps = 1/92 (1%)
 Frame = +1

Query: 343 PVRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQ 519
           P RRNKS ESLQ NVQR+KEYR++LILFP K     KG+++ EE KLATQL GP+MPV+ 
Sbjct: 100 PRRRNKSTESLQTNVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRN 159

Query: 520 PAPKSVARPITEDEKNFKAYQYLRGARSIAKL 615
              K  AR ITE+EKNFKA+  LR AR+ A+L
Sbjct: 160 VYKKEKARVITEEEKNFKAFASLRMARANARL 191


>BC106058-1|AAI06059.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score =  111 bits (267), Expect = 2e-24
 Identities = 51/84 (60%), Positives = 60/84 (71%)
 Frame = +3

Query: 96  WQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFT 275
           WQR V TWFNQPAR+ RR++ R               +RPIVRCPTVRYHTKVRAGRGF+
Sbjct: 18  WQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFS 77

Query: 276 LREIRAAGLNPVFARTIGIAVDPR 347
           L E+R AG++   ARTIGI+VDPR
Sbjct: 78  LEELRVAGIHKKVARTIGISVDPR 101



 Score =  108 bits (259), Expect = 2e-23
 Identities = 57/92 (61%), Positives = 69/92 (75%), Gaps = 1/92 (1%)
 Frame = +1

Query: 343 PVRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQ 519
           P RRNKS ESLQ NVQR+KEYR++LILFP K     KG+++ EE KLATQL GP+MPV+ 
Sbjct: 100 PRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRN 159

Query: 520 PAPKSVARPITEDEKNFKAYQYLRGARSIAKL 615
              K  AR ITE+EKNFKA+  LR AR+ A+L
Sbjct: 160 VYKKEKARVITEEEKNFKAFASLRMARANARL 191


>BC093063-1|AAH93063.1|  211|Homo sapiens RPL13 protein protein.
          Length = 211

 Score =  111 bits (267), Expect = 2e-24
 Identities = 51/84 (60%), Positives = 60/84 (71%)
 Frame = +3

Query: 96  WQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFT 275
           WQR V TWFNQPAR+ RR++ R               +RPIVRCPTVRYHTKVRAGRGF+
Sbjct: 18  WQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFS 77

Query: 276 LREIRAAGLNPVFARTIGIAVDPR 347
           L E+R AG++   ARTIGI+VDPR
Sbjct: 78  LEELRVAGIHKKVARTIGISVDPR 101



 Score =  108 bits (259), Expect = 2e-23
 Identities = 57/92 (61%), Positives = 69/92 (75%), Gaps = 1/92 (1%)
 Frame = +1

Query: 343 PVRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQ 519
           P RRNKS ESLQ NVQR+KEYR++LILFP K     KG+++ EE KLATQL GP+MPV+ 
Sbjct: 100 PRRRNKSTESLQTNVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRN 159

Query: 520 PAPKSVARPITEDEKNFKAYQYLRGARSIAKL 615
              K  AR ITE+EKNFKA+  LR AR+ A+L
Sbjct: 160 VYKKEKARVITEEEKNFKAFASLRMARANARL 191


>BC063378-1|AAH63378.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score =  111 bits (267), Expect = 2e-24
 Identities = 51/84 (60%), Positives = 60/84 (71%)
 Frame = +3

Query: 96  WQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFT 275
           WQR V TWFNQPAR+ RR++ R               +RPIVRCPTVRYHTKVRAGRGF+
Sbjct: 18  WQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFS 77

Query: 276 LREIRAAGLNPVFARTIGIAVDPR 347
           L E+R AG++   ARTIGI+VDPR
Sbjct: 78  LEELRVAGIHKKVARTIGISVDPR 101



 Score =  108 bits (259), Expect = 2e-23
 Identities = 57/92 (61%), Positives = 69/92 (75%), Gaps = 1/92 (1%)
 Frame = +1

Query: 343 PVRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQ 519
           P RRNKS ESLQ NVQR+KEYR++LILFP K     KG+++ EE KLATQL GP+MPV+ 
Sbjct: 100 PRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRN 159

Query: 520 PAPKSVARPITEDEKNFKAYQYLRGARSIAKL 615
              K  AR ITE+EKNFKA+  LR AR+ A+L
Sbjct: 160 VYKKEKARVITEEEKNFKAFASLRMARANARL 191


>BC027463-1|AAH27463.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score =  111 bits (267), Expect = 2e-24
 Identities = 51/84 (60%), Positives = 60/84 (71%)
 Frame = +3

Query: 96  WQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFT 275
           WQR V TWFNQPAR+ RR++ R               +RPIVRCPTVRYHTKVRAGRGF+
Sbjct: 18  WQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFS 77

Query: 276 LREIRAAGLNPVFARTIGIAVDPR 347
           L E+R AG++   ARTIGI+VDPR
Sbjct: 78  LEELRVAGIHKKVARTIGISVDPR 101



 Score =  108 bits (259), Expect = 2e-23
 Identities = 57/92 (61%), Positives = 69/92 (75%), Gaps = 1/92 (1%)
 Frame = +1

Query: 343 PVRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQ 519
           P RRNKS ESLQ NVQR+KEYR++LILFP K     KG+++ EE KLATQL GP+MPV+ 
Sbjct: 100 PRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRN 159

Query: 520 PAPKSVARPITEDEKNFKAYQYLRGARSIAKL 615
              K  AR ITE+EKNFKA+  LR AR+ A+L
Sbjct: 160 VYKKEKARVITEEEKNFKAFASLRMARANARL 191


>BC020804-1|AAH20804.1|  211|Homo sapiens RPL13 protein protein.
          Length = 211

 Score =  111 bits (267), Expect = 2e-24
 Identities = 51/84 (60%), Positives = 60/84 (71%)
 Frame = +3

Query: 96  WQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFT 275
           WQR V TWFNQPAR+ RR++ R               +RPIVRCPTVRYHTKVRAGRGF+
Sbjct: 18  WQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFS 77

Query: 276 LREIRAAGLNPVFARTIGIAVDPR 347
           L E+R AG++   ARTIGI+VDPR
Sbjct: 78  LEELRVAGIHKKVARTIGISVDPR 101



 Score =  108 bits (259), Expect = 2e-23
 Identities = 57/92 (61%), Positives = 69/92 (75%), Gaps = 1/92 (1%)
 Frame = +1

Query: 343 PVRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQ 519
           P RRNKS ESLQ NVQR+KEYR++LILFP K     KG+++ EE KLATQL GP+MPV+ 
Sbjct: 100 PRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRN 159

Query: 520 PAPKSVARPITEDEKNFKAYQYLRGARSIAKL 615
              K  AR ITE+EKNFKA+  LR AR+ A+L
Sbjct: 160 VYKKEKARVITEEEKNFKAFASLRMARANARL 191


>BC014167-1|AAH14167.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score =  111 bits (267), Expect = 2e-24
 Identities = 51/84 (60%), Positives = 60/84 (71%)
 Frame = +3

Query: 96  WQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFT 275
           WQR V TWFNQPAR+ RR++ R               +RPIVRCPTVRYHTKVRAGRGF+
Sbjct: 18  WQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFS 77

Query: 276 LREIRAAGLNPVFARTIGIAVDPR 347
           L E+R AG++   ARTIGI+VDPR
Sbjct: 78  LEELRVAGIHKKVARTIGISVDPR 101



 Score =  108 bits (259), Expect = 2e-23
 Identities = 57/92 (61%), Positives = 69/92 (75%), Gaps = 1/92 (1%)
 Frame = +1

Query: 343 PVRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQ 519
           P RRNKS ESLQ NVQR+KEYR++LILFP K     KG+++ EE KLATQL GP+MPV+ 
Sbjct: 100 PRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRN 159

Query: 520 PAPKSVARPITEDEKNFKAYQYLRGARSIAKL 615
              K  AR ITE+EKNFKA+  LR AR+ A+L
Sbjct: 160 VYKKEKARVITEEEKNFKAFASLRMARANARL 191


>BC013078-1|AAH13078.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score =  111 bits (267), Expect = 2e-24
 Identities = 51/84 (60%), Positives = 60/84 (71%)
 Frame = +3

Query: 96  WQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFT 275
           WQR V TWFNQPAR+ RR++ R               +RPIVRCPTVRYHTKVRAGRGF+
Sbjct: 18  WQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFS 77

Query: 276 LREIRAAGLNPVFARTIGIAVDPR 347
           L E+R AG++   ARTIGI+VDPR
Sbjct: 78  LEELRVAGIHKKVARTIGISVDPR 101



 Score =  108 bits (259), Expect = 2e-23
 Identities = 57/92 (61%), Positives = 69/92 (75%), Gaps = 1/92 (1%)
 Frame = +1

Query: 343 PVRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQ 519
           P RRNKS ESLQ NVQR+KEYR++LILFP K     KG+++ EE KLATQL GP+MPV+ 
Sbjct: 100 PRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRN 159

Query: 520 PAPKSVARPITEDEKNFKAYQYLRGARSIAKL 615
              K  AR ITE+EKNFKA+  LR AR+ A+L
Sbjct: 160 VYKKEKARVITEEEKNFKAFASLRMARANARL 191


>BC010994-1|AAH10994.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score =  111 bits (267), Expect = 2e-24
 Identities = 51/84 (60%), Positives = 60/84 (71%)
 Frame = +3

Query: 96  WQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFT 275
           WQR V TWFNQPAR+ RR++ R               +RPIVRCPTVRYHTKVRAGRGF+
Sbjct: 18  WQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFS 77

Query: 276 LREIRAAGLNPVFARTIGIAVDPR 347
           L E+R AG++   ARTIGI+VDPR
Sbjct: 78  LEELRVAGIHKKVARTIGISVDPR 101



 Score =  108 bits (259), Expect = 2e-23
 Identities = 57/92 (61%), Positives = 69/92 (75%), Gaps = 1/92 (1%)
 Frame = +1

Query: 343 PVRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQ 519
           P RRNKS ESLQ NVQR+KEYR++LILFP K     KG+++ EE KLATQL GP+MPV+ 
Sbjct: 100 PRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRN 159

Query: 520 PAPKSVARPITEDEKNFKAYQYLRGARSIAKL 615
              K  AR ITE+EKNFKA+  LR AR+ A+L
Sbjct: 160 VYKKEKARVITEEEKNFKAFASLRMARANARL 191


>BC007805-1|AAH07805.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score =  111 bits (267), Expect = 2e-24
 Identities = 51/84 (60%), Positives = 60/84 (71%)
 Frame = +3

Query: 96  WQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFT 275
           WQR V TWFNQPAR+ RR++ R               +RPIVRCPTVRYHTKVRAGRGF+
Sbjct: 18  WQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFS 77

Query: 276 LREIRAAGLNPVFARTIGIAVDPR 347
           L E+R AG++   ARTIGI+VDPR
Sbjct: 78  LEELRVAGIHKKVARTIGISVDPR 101



 Score =  108 bits (259), Expect = 2e-23
 Identities = 57/92 (61%), Positives = 69/92 (75%), Gaps = 1/92 (1%)
 Frame = +1

Query: 343 PVRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQ 519
           P RRNKS ESLQ NVQR+KEYR++LILFP K     KG+++ EE KLATQL GP+MPV+ 
Sbjct: 100 PRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRN 159

Query: 520 PAPKSVARPITEDEKNFKAYQYLRGARSIAKL 615
              K  AR ITE+EKNFKA+  LR AR+ A+L
Sbjct: 160 VYKKEKARVITEEEKNFKAFASLRMARANARL 191


>BC007563-1|AAH07563.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score =  111 bits (267), Expect = 2e-24
 Identities = 51/84 (60%), Positives = 60/84 (71%)
 Frame = +3

Query: 96  WQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFT 275
           WQR V TWFNQPAR+ RR++ R               +RPIVRCPTVRYHTKVRAGRGF+
Sbjct: 18  WQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFS 77

Query: 276 LREIRAAGLNPVFARTIGIAVDPR 347
           L E+R AG++   ARTIGI+VDPR
Sbjct: 78  LEELRVAGIHKKVARTIGISVDPR 101



 Score =  108 bits (259), Expect = 2e-23
 Identities = 57/92 (61%), Positives = 69/92 (75%), Gaps = 1/92 (1%)
 Frame = +1

Query: 343 PVRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQ 519
           P RRNKS ESLQ NVQR+KEYR++LILFP K     KG+++ EE KLATQL GP+MPV+ 
Sbjct: 100 PRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRN 159

Query: 520 PAPKSVARPITEDEKNFKAYQYLRGARSIAKL 615
              K  AR ITE+EKNFKA+  LR AR+ A+L
Sbjct: 160 VYKKEKARVITEEEKNFKAFASLRMARANARL 191


>BC007345-1|AAH07345.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score =  111 bits (267), Expect = 2e-24
 Identities = 51/84 (60%), Positives = 60/84 (71%)
 Frame = +3

Query: 96  WQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFT 275
           WQR V TWFNQPAR+ RR++ R               +RPIVRCPTVRYHTKVRAGRGF+
Sbjct: 18  WQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFS 77

Query: 276 LREIRAAGLNPVFARTIGIAVDPR 347
           L E+R AG++   ARTIGI+VDPR
Sbjct: 78  LEELRVAGIHKKVARTIGISVDPR 101



 Score =  108 bits (259), Expect = 2e-23
 Identities = 57/92 (61%), Positives = 69/92 (75%), Gaps = 1/92 (1%)
 Frame = +1

Query: 343 PVRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQ 519
           P RRNKS ESLQ NVQR+KEYR++LILFP K     KG+++ EE KLATQL GP+MPV+ 
Sbjct: 100 PRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRN 159

Query: 520 PAPKSVARPITEDEKNFKAYQYLRGARSIAKL 615
              K  AR ITE+EKNFKA+  LR AR+ A+L
Sbjct: 160 VYKKEKARVITEEEKNFKAFASLRMARANARL 191


>BC004954-1|AAH04954.1|  211|Homo sapiens RPL13 protein protein.
          Length = 211

 Score =  111 bits (267), Expect = 2e-24
 Identities = 51/84 (60%), Positives = 60/84 (71%)
 Frame = +3

Query: 96  WQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFT 275
           WQR V TWFNQPAR+ RR++ R               +RPIVRCPTVRYHTKVRAGRGF+
Sbjct: 18  WQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFS 77

Query: 276 LREIRAAGLNPVFARTIGIAVDPR 347
           L E+R AG++   ARTIGI+VDPR
Sbjct: 78  LEELRVAGIHKKVARTIGISVDPR 101



 Score =  108 bits (259), Expect = 2e-23
 Identities = 57/92 (61%), Positives = 69/92 (75%), Gaps = 1/92 (1%)
 Frame = +1

Query: 343 PVRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQ 519
           P RRNKS ESLQ NVQR+KEYR++LILFP K     KG+++ EE KLATQL GP+MPV+ 
Sbjct: 100 PRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRN 159

Query: 520 PAPKSVARPITEDEKNFKAYQYLRGARSIAKL 615
              K  AR ITE+EKNFKA+  LR AR+ A+L
Sbjct: 160 VYKKEKARVITEEEKNFKAFASLRMARANARL 191


>AB062392-1|BAB93479.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score =  111 bits (267), Expect = 2e-24
 Identities = 51/84 (60%), Positives = 60/84 (71%)
 Frame = +3

Query: 96  WQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFT 275
           WQR V TWFNQPAR+ RR++ R               +RPIVRCPTVRYHTKVRAGRGF+
Sbjct: 18  WQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFS 77

Query: 276 LREIRAAGLNPVFARTIGIAVDPR 347
           L E+R AG++   ARTIGI+VDPR
Sbjct: 78  LEELRVAGIHKKVARTIGISVDPR 101



 Score =  108 bits (259), Expect = 2e-23
 Identities = 57/92 (61%), Positives = 69/92 (75%), Gaps = 1/92 (1%)
 Frame = +1

Query: 343 PVRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQ 519
           P RRNKS ESLQ NVQR+KEYR++LILFP K     KG+++ EE KLATQL GP+MPV+ 
Sbjct: 100 PRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRN 159

Query: 520 PAPKSVARPITEDEKNFKAYQYLRGARSIAKL 615
              K  AR ITE+EKNFKA+  LR AR+ A+L
Sbjct: 160 VYKKEKARVITEEEKNFKAFASLRMARANARL 191


>BC066320-1|AAH66320.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score =  108 bits (259), Expect = 2e-23
 Identities = 50/84 (59%), Positives = 59/84 (70%)
 Frame = +3

Query: 96  WQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFT 275
           WQR V TWFNQPAR+ RR++ R               +RPIVRC TVRYHTKVRAGRGF+
Sbjct: 18  WQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCTTVRYHTKVRAGRGFS 77

Query: 276 LREIRAAGLNPVFARTIGIAVDPR 347
           L E+R AG++   ARTIGI+VDPR
Sbjct: 78  LEELRVAGIHKKVARTIGISVDPR 101



 Score =  108 bits (259), Expect = 2e-23
 Identities = 57/92 (61%), Positives = 69/92 (75%), Gaps = 1/92 (1%)
 Frame = +1

Query: 343 PVRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQ 519
           P RRNKS ESLQ NVQR+KEYR++LILFP K     KG+++ EE KLATQL GP+MPV+ 
Sbjct: 100 PRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRN 159

Query: 520 PAPKSVARPITEDEKNFKAYQYLRGARSIAKL 615
              K  AR ITE+EKNFKA+  LR AR+ A+L
Sbjct: 160 VYKKEKARVITEEEKNFKAFASLRMARANARL 191


>AB007172-1|BAA25832.1|   65|Homo sapiens ribosomal protein L13
           protein.
          Length = 65

 Score = 57.2 bits (132), Expect = 4e-08
 Identities = 29/47 (61%), Positives = 35/47 (74%)
 Frame = +1

Query: 475 KLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGARSIAKL 615
           KLATQL GP+MPV+    K  AR ITE+EKNFKA+  LR AR+ A+L
Sbjct: 2   KLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMARANARL 48


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,913,424
Number of Sequences: 237096
Number of extensions: 1856028
Number of successful extensions: 4057
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4042
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)