Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_A03
(664 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024814-2|AAK68521.2| 259|Caenorhabditis elegans Hypothetical ... 217 8e-57
AC025726-7|AAK73916.2| 272|Caenorhabditis elegans Hypothetical ... 165 2e-41
Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical pr... 154 6e-38
Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical p... 154 6e-38
Z92834-6|CAB07391.1| 312|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z92830-2|CAB07355.2| 330|Caenorhabditis elegans Hypothetical pr... 27 9.0
>AC024814-2|AAK68521.2| 259|Caenorhabditis elegans Hypothetical
protein Y54F10AR.1 protein.
Length = 259
Score = 217 bits (529), Expect = 8e-57
Identities = 100/161 (62%), Positives = 125/161 (77%), Gaps = 2/161 (1%)
Frame = +2
Query: 188 LTVEEYQVAQLYCVAEVSKNETGGGEGIEVIKNEPFKDYPLLGGKYSSGQYTYKIYHLAS 367
++VEEYQV QL+ VAE SK ETGGGEG+EV+KNEPF + PLL G+++ GQYT+KIYHL S
Sbjct: 1 MSVEEYQVGQLWSVAEASKAETGGGEGVEVLKNEPFDNVPLLNGQFTKGQYTHKIYHLQS 60
Query: 368 KVPAFIRLLAPKGSLEVHEEAWNAYPYCRTVLTNPGYMKENFVICIESLHLPDAGDQYNV 547
KVPA +R +APKGSL +HEEAWNAYPYC+TV+TNP YMKENF + IE++HLPD G N
Sbjct: 61 KVPAILRKIAPKGSLAIHEEAWNAYPYCKTVVTNPDYMKENFYVKIETIHLPDNGTTENA 120
Query: 548 HELPPEKLKTREVVPIDIANXP--LPSADYKSETDPTKFKS 664
H L ++L REVV I+IAN L S D ++ P+KF+S
Sbjct: 121 HGLKGDELAKREVVNINIANDHEYLNSGDLHPDSTPSKFQS 161
>AC025726-7|AAK73916.2| 272|Caenorhabditis elegans Hypothetical
protein Y71G12B.17 protein.
Length = 272
Score = 165 bits (401), Expect = 2e-41
Identities = 85/171 (49%), Positives = 112/171 (65%), Gaps = 1/171 (0%)
Frame = +2
Query: 155 MIIKEYRVTLPLTVEEYQVAQLYCVAEVSKNETGGGEGIEVIKNEPFKDYPLLGGKYSSG 334
MI+KEYR+ LPLTV+E++ LY V+ S+NETGGGEG+E + E F L G+ SG
Sbjct: 1 MIVKEYRIPLPLTVDEFERGLLYAVSACSRNETGGGEGVEFLVQEDFTSNTLRPGQTVSG 60
Query: 335 QYTYKIYHLASKVPAFIRLLAPKGSLEVHEEAWNAYPYCRTVLTNPGYMKENFVICIESL 514
YT KIY L SK P ++ L P + ++EE+WNAYPYC+TVLTNPGYMK+NF IE++
Sbjct: 61 TYTKKIYRLRSKAPWVLQKLLPPEAFVIYEESWNAYPYCKTVLTNPGYMKDNFHQIIETI 120
Query: 515 HLPDAGDQYNVHELPPEKLKTREVVPIDIA-NXPLPSADYKSETDPTKFKS 664
HL D G N + PEK RE+V IDIA N + +Y+ E D F++
Sbjct: 121 HLDDNGSSENPLD-GPEK---REIVFIDIADNDIFGTKNYEKEKDARLFEA 167
>Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical
protein M01F1.7 protein.
Length = 1034
Score = 154 bits (373), Expect = 6e-38
Identities = 75/171 (43%), Positives = 113/171 (66%), Gaps = 1/171 (0%)
Frame = +2
Query: 155 MIIKEYRVTLPLTVEEYQVAQLYCVAEVSKNETGGGE-GIEVIKNEPFKDYPLLGGKYSS 331
M+IKEYR+ LP+TV+EY++AQLY + + S+ ++ G + G+E+I N+P+ D P GG S
Sbjct: 1 MLIKEYRILLPMTVQEYRIAQLYMIQKKSRLDSHGQDSGVEIISNKPYTDGP--GG---S 55
Query: 332 GQYTYKIYHLASKVPAFIRLLAPKGSLEVHEEAWNAYPYCRTVLTNPGYMKENFVICIES 511
GQYT+KIYH+ S++PA+IR + P +LE HEE+WNAYP +T + P M + F + +E+
Sbjct: 56 GQYTFKIYHIGSRIPAWIRTVLPTNALEAHEESWNAYPVTKTRYSTP--MMDRFSLEVET 113
Query: 512 LHLPDAGDQYNVHELPPEKLKTREVVPIDIANXPLPSADYKSETDPTKFKS 664
L+ D G Q NV L + TR + +D P+ S DY +E DP ++S
Sbjct: 114 LYFDDHGQQENVFNLNEKDKSTRIIDYMDFVKDPISSHDYCAEEDPKLYRS 164
>Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical
protein M01F1.7 protein.
Length = 1034
Score = 154 bits (373), Expect = 6e-38
Identities = 75/171 (43%), Positives = 113/171 (66%), Gaps = 1/171 (0%)
Frame = +2
Query: 155 MIIKEYRVTLPLTVEEYQVAQLYCVAEVSKNETGGGE-GIEVIKNEPFKDYPLLGGKYSS 331
M+IKEYR+ LP+TV+EY++AQLY + + S+ ++ G + G+E+I N+P+ D P GG S
Sbjct: 1 MLIKEYRILLPMTVQEYRIAQLYMIQKKSRLDSHGQDSGVEIISNKPYTDGP--GG---S 55
Query: 332 GQYTYKIYHLASKVPAFIRLLAPKGSLEVHEEAWNAYPYCRTVLTNPGYMKENFVICIES 511
GQYT+KIYH+ S++PA+IR + P +LE HEE+WNAYP +T + P M + F + +E+
Sbjct: 56 GQYTFKIYHIGSRIPAWIRTVLPTNALEAHEESWNAYPVTKTRYSTP--MMDRFSLEVET 113
Query: 512 LHLPDAGDQYNVHELPPEKLKTREVVPIDIANXPLPSADYKSETDPTKFKS 664
L+ D G Q NV L + TR + +D P+ S DY +E DP ++S
Sbjct: 114 LYFDDHGQQENVFNLNEKDKSTRIIDYMDFVKDPISSHDYCAEEDPKLYRS 164
>Z92834-6|CAB07391.1| 312|Caenorhabditis elegans Hypothetical
protein F39B2.11 protein.
Length = 312
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +2
Query: 338 YTYKIYHLASKVPAFIRLLAPKGSLEVHEEAWNAYPYCRTVLTNPGYMKENFVICIESL 514
+ Y +Y+L + +RLLA K E+ +EA+ A T L + + N +++L
Sbjct: 133 FPYNLYYLEKRRKKALRLLAGKNDTEILKEAFMALNTLSTKLGDNKFFCGNKPTSLDAL 191
>Z92830-2|CAB07355.2| 330|Caenorhabditis elegans Hypothetical
protein F11A5.2 protein.
Length = 330
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 158 IIKEYRVTLPLTVEEYQVAQLYCVAEVS 241
I+KE+ V PL+ + Y V+ L+C+ VS
Sbjct: 84 ILKEFNV--PLSFQSYMVSTLFCMVAVS 109
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,385,414
Number of Sequences: 27780
Number of extensions: 334072
Number of successful extensions: 830
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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