Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_P22
(464 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P48159 Cluster: 60S ribosomal protein L23; n=39; cellul... 180 2e-44
UniRef50_P62829 Cluster: 60S ribosomal protein L23; n=156; cellu... 173 2e-42
UniRef50_Q8SRA7 Cluster: 60S ribosomal protein L23; n=3; Eukaryo... 125 5e-28
UniRef50_Q8ZTR0 Cluster: 50S ribosomal protein L14P; n=10; Therm... 104 1e-21
UniRef50_O59427 Cluster: 50S ribosomal protein L14P; n=7; Archae... 103 2e-21
UniRef50_Q8PV40 Cluster: 50S ribosomal protein L14P; n=36; Archa... 101 8e-21
UniRef50_A0RVY3 Cluster: Ribosomal protein L14; n=2; Thermoprote... 100 1e-20
UniRef50_A7DSY4 Cluster: Putative uncharacterized protein; n=1; ... 70 3e-11
UniRef50_Q9UX96 Cluster: Putative uncharacterized protein ORF-c1... 69 5e-11
UniRef50_O46904 Cluster: Chloroplast 50S ribosomal protein L14; ... 65 6e-10
UniRef50_Q9RXJ2 Cluster: 50S ribosomal protein L14; n=113; cellu... 64 1e-09
UniRef50_UPI0000D9F818 Cluster: PREDICTED: similar to 60S riboso... 61 1e-08
UniRef50_Q00UK0 Cluster: Ribosomal protein L23; n=1; Ostreococcu... 61 1e-08
UniRef50_Q39KF7 Cluster: 50S ribosomal protein L14; n=109; cellu... 61 1e-08
UniRef50_Q9XD26 Cluster: 50S ribosomal protein L14; n=407; cellu... 60 2e-08
UniRef50_Q2KL07 Cluster: Ribosomal protein L23; n=3; Eukaryota|R... 60 2e-08
UniRef50_P0A473 Cluster: 50S ribosomal protein L14; n=69; cellul... 58 1e-07
UniRef50_Q5KJU6 Cluster: Mitochondrial 60s ribosomal protein l38... 57 2e-07
UniRef50_P56792 Cluster: Chloroplast 50S ribosomal protein L14; ... 57 2e-07
UniRef50_Q676X9 Cluster: HUELLENLOS-like protein; n=1; Hyacinthu... 55 7e-07
UniRef50_A7IFZ1 Cluster: Ribosomal protein L14; n=1; Xanthobacte... 50 2e-05
UniRef50_A5K9G7 Cluster: 50S ribosomal subunit protein L14, puta... 50 2e-05
UniRef50_Q9G8Q2 Cluster: Ribosomal protein L14; n=1; Naegleria g... 50 3e-05
UniRef50_Q7RBS4 Cluster: LSU ribosomal protein L14P; n=4; Aconoi... 49 6e-05
UniRef50_A0IXJ1 Cluster: Ribosomal protein L14b/L23e precursor; ... 47 2e-04
UniRef50_A3U7M5 Cluster: 50S ribosomal protein L14; n=1; Croceib... 46 4e-04
UniRef50_A6SDC7 Cluster: 50S ribosomal protein L14; n=7; Pezizom... 43 0.003
UniRef50_A0NWH4 Cluster: 50S ribosomal protein L14; n=2; Bacteri... 42 0.005
UniRef50_Q3S293 Cluster: Ribosomal protein L14; n=1; Thalassiosi... 42 0.005
UniRef50_O21033 Cluster: Mitochondrial 60S ribosomal protein L14... 42 0.007
UniRef50_Q9G8W6 Cluster: Ribosomal protein L14; n=1; Rhodomonas ... 39 0.047
UniRef50_P15767 Cluster: Mitochondrial 60S ribosomal protein L14... 37 0.19
UniRef50_Q9G8Z6 Cluster: Ribosomal protein L14; n=1; Ochromonas ... 36 0.33
UniRef50_Q9TCB2 Cluster: Ribosomal protein L14; n=1; Nephroselmi... 36 0.43
UniRef50_Q9TAK1 Cluster: Ribosomal protein L14; n=1; Cafeteria r... 35 0.76
UniRef50_Q9LNP8 Cluster: F1L3.27; n=14; Magnoliophyta|Rep: F1L3.... 35 1.0
UniRef50_Q9ZZN9 Cluster: 50S ribosomal protein L14; n=1; Cyanidi... 34 1.8
UniRef50_UPI000023CF98 Cluster: predicted protein; n=1; Gibberel... 33 2.3
UniRef50_A4C2U8 Cluster: Putative uncharacterized protein; n=2; ... 33 2.3
UniRef50_Q6UVR4 Cluster: Ribosomal protein L14; n=1; Pseudendocl... 33 2.3
UniRef50_A2BGS3 Cluster: Novel protein similar to vertebrate tra... 33 3.1
UniRef50_A5ZN23 Cluster: Putative uncharacterized protein; n=1; ... 33 3.1
UniRef50_Q6ACJ4 Cluster: Sugar ABC transporter, solute-binding p... 32 7.1
UniRef50_Q11M94 Cluster: Oligopeptide/dipeptide ABC transporter,... 32 7.1
UniRef50_Q7YN74 Cluster: Ribosomal protein L14; n=2; Eimeriorina... 32 7.1
UniRef50_Q8SRQ2 Cluster: UBIQUITIN CARBOXYL-TERMINAL HYDROLASE; ... 32 7.1
>UniRef50_P48159 Cluster: 60S ribosomal protein L23; n=39; cellular
organisms|Rep: 60S ribosomal protein L23 - Drosophila
melanogaster (Fruit fly)
Length = 140
Score = 180 bits (437), Expect = 2e-44
Identities = 84/87 (96%), Positives = 85/87 (97%)
Frame = +2
Query: 152 IKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGV 331
I+GRLNRLPAAG GDM VATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGV
Sbjct: 45 IRGRLNRLPAAGVGDMFVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGV 104
Query: 332 IVNNKGEMKGSAITGPVAKECADLWPR 412
IVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 105 IVNNKGEMKGSAITGPVAKECADLWPR 131
Score = 70.1 bits (164), Expect = 2e-11
Identities = 32/35 (91%), Positives = 33/35 (94%)
Frame = +1
Query: 46 AGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQG 150
AG KFRISLGLPVGAV+NCADNTGAKNLYVIAV G
Sbjct: 10 AGGKFRISLGLPVGAVMNCADNTGAKNLYVIAVHG 44
>UniRef50_P62829 Cluster: 60S ribosomal protein L23; n=156; cellular
organisms|Rep: 60S ribosomal protein L23 - Homo sapiens
(Human)
Length = 140
Score = 173 bits (421), Expect = 2e-42
Identities = 80/89 (89%), Positives = 85/89 (95%)
Frame = +2
Query: 146 KXIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNA 325
K IKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNA
Sbjct: 43 KGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNA 102
Query: 326 GVIVNNKGEMKGSAITGPVAKECADLWPR 412
GVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 103 GVIVNNKGEMKGSAITGPVAKECADLWPR 131
Score = 70.5 bits (165), Expect = 2e-11
Identities = 31/35 (88%), Positives = 35/35 (100%)
Frame = +1
Query: 46 AGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQG 150
+GAKFRISLGLPVGAVINCADNTGAKNLY+I+V+G
Sbjct: 10 SGAKFRISLGLPVGAVINCADNTGAKNLYIISVKG 44
>UniRef50_Q8SRA7 Cluster: 60S ribosomal protein L23; n=3;
Eukaryota|Rep: 60S ribosomal protein L23 -
Encephalitozoon cuniculi
Length = 146
Score = 125 bits (301), Expect = 5e-28
Identities = 56/89 (62%), Positives = 71/89 (79%)
Frame = +2
Query: 146 KXIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNA 325
K +GRLNRLPAA GD+ V +VKKGKPELRKKV A++IRQ+K +RR DG I FEDNA
Sbjct: 49 KRYRGRLNRLPAAAPGDICVVSVKKGKPELRKKVHYAILIRQKKIWRRTDGSHIMFEDNA 108
Query: 326 GVIVNNKGEMKGSAITGPVAKECADLWPR 412
V++NNKGE++G+ I GPV +E AD+WP+
Sbjct: 109 AVLINNKGELRGAQIAGPVPREVADMWPK 137
Score = 33.1 bits (72), Expect = 3.1
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +1
Query: 55 KFRISLGLPVGAVINCADNTGAKNLYVIAVQGYQ 156
+++++ G+ V ++ CADN+GAK L I V+ Y+
Sbjct: 19 RYKMTRGIQVETLMKCADNSGAKILRCIGVKRYR 52
>UniRef50_Q8ZTR0 Cluster: 50S ribosomal protein L14P; n=10;
Thermoprotei|Rep: 50S ribosomal protein L14P -
Pyrobaculum aerophilum
Length = 144
Score = 104 bits (249), Expect = 1e-21
Identities = 46/80 (57%), Positives = 60/80 (75%)
Frame = +2
Query: 170 RLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKG 349
R+P AG GDM+V V++GKPELRK++ A+V+RQR+P+RR DG ++ FEDNA VIV +G
Sbjct: 55 RIPGAGVGDMVVVVVREGKPELRKQIFRAIVVRQRRPYRRPDGTWVAFEDNAVVIVTPEG 114
Query: 350 EMKGSAITGPVAKECADLWP 409
+ KGS I GPVA E WP
Sbjct: 115 DPKGSEIHGPVAMEATLRWP 134
>UniRef50_O59427 Cluster: 50S ribosomal protein L14P; n=7;
Archaea|Rep: 50S ribosomal protein L14P - Pyrococcus
horikoshii
Length = 141
Score = 103 bits (247), Expect = 2e-21
Identities = 48/85 (56%), Positives = 64/85 (75%)
Frame = +2
Query: 158 GRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIV 337
G RL +AG GDM+VATVKKG+P++R +V+ AV+IRQRK +RR DG+ + FEDNA VIV
Sbjct: 48 GTRRRLASAGVGDMVVATVKKGRPDMRHQVVRAVIIRQRKEYRRLDGMRVKFEDNAAVIV 107
Query: 338 NNKGEMKGSAITGPVAKECADLWPR 412
+G +G+ I GPVA+E A+ W R
Sbjct: 108 TPEGVPRGTEIRGPVAREAAEKWVR 132
Score = 31.9 bits (69), Expect = 7.1
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 61 RISLGLPVGAVINCADNTGAKNLYVIAVQGYQRSPEQTA 177
R + +P+GA + ADN+GAK + VI V Y + + A
Sbjct: 16 RPTRAIPIGAYLTVADNSGAKVIQVIGVVEYHGTRRRLA 54
>UniRef50_Q8PV40 Cluster: 50S ribosomal protein L14P; n=36;
Archaea|Rep: 50S ribosomal protein L14P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 132
Score = 101 bits (242), Expect = 8e-21
Identities = 47/89 (52%), Positives = 65/89 (73%)
Frame = +2
Query: 146 KXIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNA 325
K +G NR+P AG GDM V +VKKG PE+RK+++ AVV+RQ++ FRR DG+ + FEDNA
Sbjct: 35 KKYRGVKNRMPCAGIGDMCVVSVKKGTPEMRKQILLAVVVRQKQEFRRPDGLHVSFEDNA 94
Query: 326 GVIVNNKGEMKGSAITGPVAKECADLWPR 412
VI + G KG+ I GPVA+E A+ +P+
Sbjct: 95 MVITDEDGIPKGTDIKGPVAREVAERFPK 123
Score = 33.9 bits (74), Expect = 1.8
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 49 GAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGYQ 156
G + I L GA I C DNTGAK + +I+V+ Y+
Sbjct: 3 GIRSNIPRALNAGAQIACVDNTGAKVVEIISVKKYR 38
>UniRef50_A0RVY3 Cluster: Ribosomal protein L14; n=2;
Thermoprotei|Rep: Ribosomal protein L14 - Cenarchaeum
symbiosum
Length = 144
Score = 100 bits (240), Expect = 1e-20
Identities = 50/105 (47%), Positives = 66/105 (62%)
Frame = +2
Query: 98 TAPTTQGQRICM*SQSKXIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRK 277
T G ++ + K R++RLPAA GD + VKKG ELRK+V AV+IRQ+
Sbjct: 31 TCADNSGAKVLEIIMVQKAKTRVSRLPAAAVGDYVNVVVKKGPAELRKQVHGAVIIRQKY 90
Query: 278 PFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 412
P RR +GV + FEDNA V+ +GEMKG+ I GPVA E ++ WPR
Sbjct: 91 PVRRLNGVRVAFEDNAAVLTTPEGEMKGTDIKGPVAAEASEKWPR 135
Score = 37.1 bits (82), Expect = 0.19
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +1
Query: 64 ISLGLPVGAVINCADNTGAKNLYVIAVQ 147
++ LPVGA + CADN+GAK L +I VQ
Sbjct: 20 VTRALPVGARVTCADNSGAKVLEIIMVQ 47
>UniRef50_A7DSY4 Cluster: Putative uncharacterized protein; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Putative
uncharacterized protein - Candidatus Nitrosopumilus
maritimus SCM1
Length = 148
Score = 69.7 bits (163), Expect = 3e-11
Identities = 39/83 (46%), Positives = 47/83 (56%)
Frame = -3
Query: 417 AIRGHRSAHSLATGPVMAEPFISPLLLTMTPALSSKYINTPSRLLNGFRCLMTTAGITFF 238
A GH S S ATGP+M+ PF+SP + T ALSSK TP L G+ CL+ TA T F
Sbjct: 14 ATLGHFSEASAATGPLMSVPFVSPSGVINTAALSSKQTLTPFNLRTGYFCLIITAPYTCF 73
Query: 237 RSSGLPFLTVATIMSPEPAAGSL 169
+S PF T SP A G+L
Sbjct: 74 LNSAGPFFTTTLQKSPTDAEGNL 96
>UniRef50_Q9UX96 Cluster: Putative uncharacterized protein
ORF-c10_023; n=2; Archaea|Rep: Putative uncharacterized
protein ORF-c10_023 - Sulfolobus solfataricus
Length = 107
Score = 68.9 bits (161), Expect = 5e-11
Identities = 42/88 (47%), Positives = 51/88 (57%)
Frame = -3
Query: 417 AIRGHRSAHSLATGPVMAEPFISPLLLTMTPALSSKYINTPSRLLNGFRCLMTTAGITFF 238
AI GH SA SLA GP+ + PF P +T ALSSK I+ PS LL G CL TA F
Sbjct: 20 AIFGHLSAASLAIGPLTSVPFGVPSGFIITTALSSKEIHVPSGLLYGILCLTITALNFCF 79
Query: 237 RSSGLPFLTVATIMSPEPAAGSLFRRPL 154
+SG+PFL +S A G+L + PL
Sbjct: 80 LTSGVPFLIDTITISAMLANGTLLKTPL 107
>UniRef50_O46904 Cluster: Chloroplast 50S ribosomal protein L14;
n=64; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L14 - Guillardia theta (Cryptomonas phi)
Length = 121
Score = 65.3 bits (152), Expect = 6e-10
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Frame = +2
Query: 182 AGSGDMIVATVKKGKPEL---RKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGE 352
A GD+I+ VK P + R V+ AV++R + RR+DG+ I F+DNA VI+N +
Sbjct: 32 ASIGDVIIGVVKDATPNMPVKRSDVVRAVIMRTKNTIRRKDGMSIRFDDNAAVIINKENN 91
Query: 353 MKGSAITGPVAKECAD 400
+G+ + GP+A+E D
Sbjct: 92 PRGTRVFGPIARELRD 107
>UniRef50_Q9RXJ2 Cluster: 50S ribosomal protein L14; n=113; cellular
organisms|Rep: 50S ribosomal protein L14 - Deinococcus
radiodurans
Length = 134
Score = 64.1 bits (149), Expect = 1e-09
Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Frame = +2
Query: 191 GDMIVATVKKGKPELRKK---VMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKG 361
GD+IVA+VK P K V+ AVV+R +R DG I F+ NA VI+NN+GE +G
Sbjct: 48 GDIIVASVKDAAPRGAVKAGDVVKAVVVRTSHAIKRADGSTIRFDRNAAVIINNQGEPRG 107
Query: 362 SAITGPVAKECAD 400
+ + GPVA+E D
Sbjct: 108 TRVFGPVARELRD 120
>UniRef50_UPI0000D9F818 Cluster: PREDICTED: similar to 60S ribosomal
protein L23; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 60S ribosomal protein L23 - Macaca mulatta
Length = 98
Score = 60.9 bits (141), Expect = 1e-08
Identities = 34/86 (39%), Positives = 46/86 (53%)
Frame = +1
Query: 46 AGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGYQRSPEQTAGGRFRGHDCGHSQKG* 225
+ KFRISLGLP GAVIN AD+TGAK+LY+I+ +G + +K
Sbjct: 10 SSVKFRISLGLPAGAVINYADSTGAKSLYIISRKGINGRLNRLPAADVGYMVITTVKKRQ 69
Query: 226 T*TPEKGNAGSGHQAAETVQKA*WSI 303
T +KG + SGH E + + W I
Sbjct: 70 TRAQKKGTSSSGHLTTEVIPEKRWHI 95
>UniRef50_Q00UK0 Cluster: Ribosomal protein L23; n=1; Ostreococcus
tauri|Rep: Ribosomal protein L23 - Ostreococcus tauri
Length = 93
Score = 60.9 bits (141), Expect = 1e-08
Identities = 25/34 (73%), Positives = 32/34 (94%)
Frame = +1
Query: 46 AGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQ 147
+G K+++S GLPVGAV+NCADNTGAKNLY+IAV+
Sbjct: 50 SGTKYKMSYGLPVGAVVNCADNTGAKNLYMIAVK 83
>UniRef50_Q39KF7 Cluster: 50S ribosomal protein L14; n=109; cellular
organisms|Rep: 50S ribosomal protein L14 - Burkholderia
sp. (strain 383) (Burkholderia cepacia (strain ATCC
17760/ NCIB 9086 / R18194))
Length = 122
Score = 60.9 bits (141), Expect = 1e-08
Identities = 34/73 (46%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Frame = +2
Query: 182 AGSGDMIVATVKKGKPELRKK---VMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGE 352
AG GD+I +VK+ P R K + AVV+R K RR+DG I F+ NA V++NNK E
Sbjct: 33 AGIGDIIKVSVKEATPRGRVKKGEIYNAVVVRTAKGVRRQDGSLIKFDGNAAVLLNNKLE 92
Query: 353 MKGSAITGPVAKE 391
G+ I GPV +E
Sbjct: 93 PIGTRIFGPVTRE 105
>UniRef50_Q9XD26 Cluster: 50S ribosomal protein L14; n=407; cellular
organisms|Rep: 50S ribosomal protein L14 - Leptospira
interrogans
Length = 130
Score = 60.5 bits (140), Expect = 2e-08
Identities = 30/60 (50%), Positives = 38/60 (63%)
Frame = +2
Query: 221 GKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECAD 400
GK K V AVV+R K RR DG +I F+DNA I+++KG KG+ I GPVA+E D
Sbjct: 57 GKKVHNKAVQRAVVVRTTKEIRRPDGSYIRFDDNACAIIDDKGNPKGTRIFGPVARELRD 116
>UniRef50_Q2KL07 Cluster: Ribosomal protein L23; n=3; Eukaryota|Rep:
Ribosomal protein L23 - Siniperca chuatsi (Chinese
perch)
Length = 46
Score = 60.1 bits (139), Expect = 2e-08
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +1
Query: 46 AGAKFRISLGLPVGAVINCADNTGAKNL 129
+GAKFRISLGLPVGAVINCADNTGAKNL
Sbjct: 19 SGAKFRISLGLPVGAVINCADNTGAKNL 46
>UniRef50_P0A473 Cluster: 50S ribosomal protein L14; n=69; cellular
organisms|Rep: 50S ribosomal protein L14 - Streptococcus
pneumoniae
Length = 122
Score = 57.6 bits (133), Expect = 1e-07
Identities = 31/73 (42%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Frame = +2
Query: 182 AGSGDMIVATVKKGKP--ELRK-KVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGE 352
A GD+IVA+VK+ P ++K V+ AV++R + RR DG +I F++NA VI+
Sbjct: 33 ANIGDVIVASVKQATPGGAVKKGDVVKAVIVRTKSGARRADGSYIKFDENAAVIIREDKT 92
Query: 353 MKGSAITGPVAKE 391
+G+ I GPVA+E
Sbjct: 93 PRGTRIFGPVARE 105
>UniRef50_Q5KJU6 Cluster: Mitochondrial 60s ribosomal protein l38
(Yml38), putative; n=13; Dikarya|Rep: Mitochondrial 60s
ribosomal protein l38 (Yml38), putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 149
Score = 57.2 bits (132), Expect = 2e-07
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 18/98 (18%)
Frame = +2
Query: 152 IKGRLNRLPAAGSGDMIVATVKKGKP-----------------ELRK-KVMPAVVIRQRK 277
+K RL A GD IV V K +P ++RK + AVV+R +K
Sbjct: 27 VKTRLKSTGFATVGDEIVCVVNKARPIPANEVVKNPNASSNIQKIRKGDIRRAVVVRVKK 86
Query: 278 PFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKE 391
+R DG + F+D+A V++NNKGEM G+ I GPVA E
Sbjct: 87 TTQRPDGSVVRFDDSAAVLLNNKGEMLGTRIVGPVASE 124
>UniRef50_P56792 Cluster: Chloroplast 50S ribosomal protein L14;
n=151; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L14 - Arabidopsis thaliana (Mouse-ear cress)
Length = 122
Score = 56.8 bits (131), Expect = 2e-07
Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Frame = +2
Query: 191 GDMIVATVKKGKPEL---RKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKG 361
GD+IVA +K+ P R +V+ AV++R K +R +G I ++DNA V+++ +G KG
Sbjct: 36 GDVIVAVIKEAIPNTPLERSEVIRAVIVRTCKELKRNNGTIIRYDDNAAVVIDQEGNPKG 95
Query: 362 SAITGPVAKECADL 403
+ + G + +E L
Sbjct: 96 TRVFGAIPRELRQL 109
>UniRef50_Q676X9 Cluster: HUELLENLOS-like protein; n=1; Hyacinthus
orientalis|Rep: HUELLENLOS-like protein - Hyacinthus
orientalis (Common hyacinth)
Length = 171
Score = 55.2 bits (127), Expect = 7e-07
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Frame = +2
Query: 191 GDMIVATVKKGKPELRKK---VMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKG 361
GD I+A+VK+ +P+ + K V+ VV+R P R DG I F+DNA V+VN +GE G
Sbjct: 85 GDTIIASVKEAQPKGKVKKGDVVYGVVVRAAMPRGRCDGSEIKFDDNAVVLVNKQGEPIG 144
Query: 362 SAITGPVAKE 391
+ + GPV E
Sbjct: 145 TRVFGPVPHE 154
>UniRef50_A7IFZ1 Cluster: Ribosomal protein L14; n=1; Xanthobacter
autotrophicus Py2|Rep: Ribosomal protein L14 -
Xanthobacter sp. (strain Py2)
Length = 144
Score = 50.4 bits (115), Expect = 2e-05
Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Frame = +2
Query: 191 GDMIVATVKKGKPELRKK---VMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNK 346
GD+IV +VK+ P R K VM AVV+R K RR DG I F+ NA V++NNK
Sbjct: 36 GDIIVVSVKEAIPRGRVKKGDVMKAVVVRTAKDIRRVDGSVIRFDRNAAVLINNK 90
>UniRef50_A5K9G7 Cluster: 50S ribosomal subunit protein L14,
putative; n=4; Aconoidasida|Rep: 50S ribosomal subunit
protein L14, putative - Plasmodium vivax
Length = 183
Score = 50.0 bits (114), Expect = 2e-05
Identities = 25/69 (36%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Frame = +2
Query: 191 GDMIVATV--KKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGS 364
GD I ++ K +++K +++R++K +R+DG +I F+DNA VI+ +K ++K +
Sbjct: 103 GDRIRVSIRDKTNDCTIQEKTPKGIIVRRKKETKRKDGSYIKFDDNAFVII-SKNKLKAT 161
Query: 365 AITGPVAKE 391
I GPVA E
Sbjct: 162 KIKGPVAME 170
>UniRef50_Q9G8Q2 Cluster: Ribosomal protein L14; n=1; Naegleria
gruberi|Rep: Ribosomal protein L14 - Naegleria gruberi
Length = 123
Score = 49.6 bits (113), Expect = 3e-05
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Frame = +2
Query: 140 QSKXIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMP-----AVVIRQRKPFRRRDGVF 304
Q++ IK + A GD IV +KK K + KV +++R +K +R +G++
Sbjct: 18 QAECIKVLKKKYQHASVGDYIVVAIKKVKMRKKMKVKMHDVRFGIIVRTKKNIKRYNGIY 77
Query: 305 IYFEDNAGVIVNNKGEMKGSAITGPVAKE 391
+ FEDNA V+++ G+ I GP++ E
Sbjct: 78 VSFEDNAMVLLDKNLNPIGNRINGPLSYE 106
>UniRef50_Q7RBS4 Cluster: LSU ribosomal protein L14P; n=4;
Aconoidasida|Rep: LSU ribosomal protein L14P -
Plasmodium yoelii yoelii
Length = 124
Score = 48.8 bits (111), Expect = 6e-05
Identities = 24/69 (34%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Frame = +2
Query: 191 GDMIVATVKKGKPE--LRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGS 364
GD I +++ E + +K +++R++K +R+DG +I F+DNA V++ +K ++K +
Sbjct: 44 GDRIRVSIRDKTSECGVSEKTPKGIIVRRKKETKRKDGSYIKFDDNAFVMI-SKNKLKAT 102
Query: 365 AITGPVAKE 391
I GPVA E
Sbjct: 103 KIKGPVAME 111
>UniRef50_A0IXJ1 Cluster: Ribosomal protein L14b/L23e precursor;
n=1; Serratia proteamaculans 568|Rep: Ribosomal protein
L14b/L23e precursor - Serratia proteamaculans 568
Length = 119
Score = 47.2 bits (107), Expect = 2e-04
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +2
Query: 245 VMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMK-GSAITGPVAKE 391
V+ AVV+R +K RR DG I F+ NA VI+NN E G+ I GPV +E
Sbjct: 53 VLKAVVVRTKKGVRRPDGSVIRFDGNACVILNNNSEQPIGTRIFGPVTRE 102
>UniRef50_A3U7M5 Cluster: 50S ribosomal protein L14; n=1;
Croceibacter atlanticus HTCC2559|Rep: 50S ribosomal
protein L14 - Croceibacter atlanticus HTCC2559
Length = 135
Score = 46.0 bits (104), Expect = 4e-04
Identities = 33/76 (43%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = -3
Query: 399 SAHSLATGPVMAEPFISPLLLTMTPALSSKYINTPSRLLNGFRCLMTTAGIT---FFRSS 229
S SLATGP P ISP+ T ALSSK I PS L F TTA T
Sbjct: 27 SRSSLATGPKTRVPLISPVGFNNTHALSSKRIYEPSGLRTSFLVRTTTAVETAPFLIPPF 86
Query: 228 GLPFLTVATIMSPEPA 181
G+ T+ TI+SP A
Sbjct: 87 GVASFTLTTILSPTDA 102
>UniRef50_A6SDC7 Cluster: 50S ribosomal protein L14; n=7;
Pezizomycotina|Rep: 50S ribosomal protein L14 -
Botryotinia fuckeliana B05.10
Length = 134
Score = 43.2 bits (97), Expect = 0.003
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = +2
Query: 236 RKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKE 391
R + AVV+R K +R DG + F+DNA V++N GE G+ + G V E
Sbjct: 66 RGDIRHAVVVRTVKKLQRPDGSVVKFDDNACVLINKAGEPIGTRLNGVVGTE 117
>UniRef50_A0NWH4 Cluster: 50S ribosomal protein L14; n=2;
Bacteria|Rep: 50S ribosomal protein L14 - Stappia
aggregata IAM 12614
Length = 147
Score = 42.3 bits (95), Expect = 0.005
Identities = 31/70 (44%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = -3
Query: 390 SLATGPVMAEPFISPLLLTMTPALSSKYINTPSRLLNGFRCLMTTAGIT---FFRSSGLP 220
S TGP + P S LLLT T AL S I PS F TTA IT R G+
Sbjct: 46 SRGTGPKIRVPIGSLLLLTSTAALRSNRITLPSGRRISFAVRTTTAFITSPFLTRPRGIA 105
Query: 219 FLTVATIMSP 190
LT T+MSP
Sbjct: 106 SLTETTMMSP 115
>UniRef50_Q3S293 Cluster: Ribosomal protein L14; n=1; Thalassiosira
pseudonana|Rep: Ribosomal protein L14 - Thalassiosira
pseudonana (Marine diatom)
Length = 126
Score = 42.3 bits (95), Expect = 0.005
Identities = 21/73 (28%), Positives = 42/73 (57%), Gaps = 7/73 (9%)
Frame = +2
Query: 191 GDMIVATVKKGKPELRK-------KVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKG 349
GD+I+ +++K + + R +V AV+IR +K ++DG ++F+ N +++ +G
Sbjct: 36 GDIIIVSIQKLRNKARSTSKVQKGEVHKAVIIRTKKKTIKKDGTVVFFQSNVVSLISKQG 95
Query: 350 EMKGSAITGPVAK 388
+ S I GP+ K
Sbjct: 96 KPIASRIMGPIPK 108
>UniRef50_O21033 Cluster: Mitochondrial 60S ribosomal protein L14;
n=2; Dictyosteliida|Rep: Mitochondrial 60S ribosomal
protein L14 - Dictyostelium discoideum (Slime mold)
Length = 129
Score = 41.9 bits (94), Expect = 0.007
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 9/76 (11%)
Frame = +2
Query: 191 GDMIVATVKK------GKPELRKK---VMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNN 343
GD IV +KK GK +L+ K V AV+++ ++P RR+ G+ + +N +++
Sbjct: 37 GDKIVVVIKKMEKRKGGKYKLKVKKSDVCYAVIVKSKQPVRRKSGIIVNAGENGVILLTK 96
Query: 344 KGEMKGSAITGPVAKE 391
E G+ +TG V KE
Sbjct: 97 TKEPIGTRLTGVVFKE 112
>UniRef50_Q9G8W6 Cluster: Ribosomal protein L14; n=1; Rhodomonas
salina|Rep: Ribosomal protein L14 - Rhodomonas salina
(Cryptomonas salina)
Length = 113
Score = 39.1 bits (87), Expect = 0.047
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +2
Query: 215 KKGKPELRKKVMPAVVIRQRKPFR-RRDGVFIYFEDNAGVIVNNKGEMKGSAITGPV 382
KK K ++KK + I K F +++G+F+ F N V++N+K + G+ GPV
Sbjct: 37 KKSKTNIKKKSLFLAAIICEKIFNSKKNGIFVAFNKNNAVLLNSKNNLIGTRFFGPV 93
>UniRef50_P15767 Cluster: Mitochondrial 60S ribosomal protein L14;
n=1; Paramecium tetraurelia|Rep: Mitochondrial 60S
ribosomal protein L14 - Paramecium tetraurelia
Length = 119
Score = 37.1 bits (82), Expect = 0.19
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 191 GDMIVATVKKGKPEL---RKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKG 361
GD I +++ KPE R K A+++R +RDG F F N V++ + G
Sbjct: 36 GDYIKVSIRSTKPECTIKRGKKKKAIIVRHAFGRLKRDGSFSKFSSNVCVLLKKRTAPLG 95
Query: 362 SAITGPV 382
I GP+
Sbjct: 96 REIKGPI 102
>UniRef50_Q9G8Z6 Cluster: Ribosomal protein L14; n=1; Ochromonas
danica|Rep: Ribosomal protein L14 - Ochromonas danica
Length = 127
Score = 36.3 bits (80), Expect = 0.33
Identities = 26/77 (33%), Positives = 47/77 (61%), Gaps = 7/77 (9%)
Frame = +2
Query: 182 AGSGDMIVATVK--KGKPELRKK---VMPAVVIRQRK-PFRRRD-GVFIYFEDNAGVIVN 340
A SGD+I+A++K K K ++ K V+ AVV++ + F R++ I F +N +I++
Sbjct: 33 AKSGDLIMASIKSIKYKQNIKLKKGDVVRAVVVKTKVFSFLRKEIKTPIKFFENGAIILS 92
Query: 341 NKGEMKGSAITGPVAKE 391
NK ++ G+ I G + K+
Sbjct: 93 NKNKLVGTRIFGGINKQ 109
>UniRef50_Q9TCB2 Cluster: Ribosomal protein L14; n=1; Nephroselmis
olivacea|Rep: Ribosomal protein L14 - Nephroselmis
olivacea
Length = 124
Score = 35.9 bits (79), Expect = 0.43
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Frame = +2
Query: 191 GDMIVATVKKGKPELRKK-----VMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEM 355
GD+IV T+KK + + K V V++ +K R+DG F+ N ++ +
Sbjct: 36 GDVIVVTIKKANSKYKGKATAGQVYRGVILETKKEVTRKDGSLFSFDRNVVALMTPQENP 95
Query: 356 KGSAITG 376
G+ ITG
Sbjct: 96 MGTRITG 102
>UniRef50_Q9TAK1 Cluster: Ribosomal protein L14; n=1; Cafeteria
roenbergensis|Rep: Ribosomal protein L14 - Cafeteria
roenbergensis
Length = 124
Score = 35.1 bits (77), Expect = 0.76
Identities = 19/82 (23%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Frame = +2
Query: 152 IKGRLNRLPAAGSGDMI-VATVKKGKPELRK-KVMPAVVIRQRKPFRRRDGVFIYFEDNA 325
++G N+ GS ++ + ++ G ++ +V AV++R + + +DG F+ N
Sbjct: 25 LEGFFNKTAVVGSLIVLSIRGIRSGSRRVKAGQVSLAVIVRTKAWTKFKDGSQSRFQRNC 84
Query: 326 GVIVNNKGEMKGSAITGPVAKE 391
V++ K ++ G+ + GPV+++
Sbjct: 85 AVLLTRKKQILGTKVFGPVSRQ 106
>UniRef50_Q9LNP8 Cluster: F1L3.27; n=14; Magnoliophyta|Rep: F1L3.27
- Arabidopsis thaliana (Mouse-ear cress)
Length = 201
Score = 34.7 bits (76), Expect = 1.0
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 15/72 (20%)
Frame = +2
Query: 191 GDMIVATVKKGKPELRKKV----MP-----------AVVIRQRKPFRRRDGVFIYFEDNA 325
GD+IV +VK+ P ++KKV +P VV+R P R DG + F+DNA
Sbjct: 86 GDIIVGSVKEANPIVQKKVKKDAIPKGKVKKGMVVYGVVVRAAMPKGRADGSQVKFDDNA 145
Query: 326 GVIVNNKGEMKG 361
V+V K E KG
Sbjct: 146 IVVVGIK-EKKG 156
>UniRef50_Q9ZZN9 Cluster: 50S ribosomal protein L14; n=1;
Cyanidioschyzon merolae|Rep: 50S ribosomal protein L14 -
Cyanidioschyzon merolae (Red alga)
Length = 127
Score = 33.9 bits (74), Expect = 1.8
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 8/72 (11%)
Frame = +2
Query: 191 GDMIVATVK---KGKPELRKKVMP-----AVVIRQRKPFRRRDGVFIYFEDNAGVIVNNK 346
G I+ T+K + +R K+ A+++R +K R D ++ F DN V+++NK
Sbjct: 36 GSTIIVTIKELYRSNNSVRSKIEKGIISHALIVRTKKKNRSLDNIWTNFIDNGVVLLDNK 95
Query: 347 GEMKGSAITGPV 382
+ + + GP+
Sbjct: 96 KSLMFTRVRGPI 107
>UniRef50_UPI000023CF98 Cluster: predicted protein; n=1; Gibberella
zeae PH-1|Rep: predicted protein - Gibberella zeae PH-1
Length = 336
Score = 33.5 bits (73), Expect = 2.3
Identities = 25/64 (39%), Positives = 29/64 (45%)
Frame = +3
Query: 102 RRQHRGKESVCDRSPRXSKVA*TDCRRPVPGT*LWPQSKRVNLNSGKR*CRQWSSGSGNR 281
RR RG +V DR PR + DC RP P RV G+R CR S S R
Sbjct: 250 RRARRGNMNVMDRLPRPASEP-RDCERP-------PVHDRVAALRGERRCRPTSRSSIGR 301
Query: 282 SEGV 293
S+ V
Sbjct: 302 SQAV 305
>UniRef50_A4C2U8 Cluster: Putative uncharacterized protein; n=2;
Polaribacter|Rep: Putative uncharacterized protein -
Polaribacter irgensii 23-P
Length = 503
Score = 33.5 bits (73), Expect = 2.3
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 5/71 (7%)
Frame = +2
Query: 161 RLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVV-----IRQRKPFRRRDGVFIYFEDNA 325
R++ L G I K + K P V+ I K +G IYF DN+
Sbjct: 158 RIDSLSLDGQATTIKGRFLKDSELIFTKEKPTVIYGYAAIPANKTLTITEGARIYFHDNS 217
Query: 326 GVIVNNKGEMK 358
G+IV+ KG +K
Sbjct: 218 GLIVDKKGSLK 228
>UniRef50_Q6UVR4 Cluster: Ribosomal protein L14; n=1;
Pseudendoclonium akinetum|Rep: Ribosomal protein L14 -
Pseudendoclonium akinetum (Green alga)
Length = 129
Score = 33.5 bits (73), Expect = 2.3
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 10/62 (16%)
Frame = +2
Query: 191 GDMIVATVKKGKPE-----LRK-----KVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVN 340
GD + ATVKKG + L+K ++ VVI+ + RR DG I F N G+ VN
Sbjct: 37 GDFLKATVKKGSAKSQTQRLKKLTGSERLRNLVVIQTKSALRRLDGGAIRFNANCGITVN 96
Query: 341 NK 346
+
Sbjct: 97 ER 98
>UniRef50_A2BGS3 Cluster: Novel protein similar to vertebrate
transmembrane protein 116; n=3; Otophysi|Rep: Novel
protein similar to vertebrate transmembrane protein 116
- Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 361
Score = 33.1 bits (72), Expect = 3.1
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = -3
Query: 402 RSAHSLATGPVMAEPFISPLLLTMTPALSSKYINTPSRLLNGFRCLMTTAGITFFRSSGL 223
R+ + GPV++ + PLLLT ++ + +RCL+ G + SS
Sbjct: 140 RTRNCRCLGPVLS--CLLPLLLTAPVFVAGNVFQCYTNFTQPYRCLLMHTGAVYLTSSAS 197
Query: 222 PFLTVATIM 196
P LT +I+
Sbjct: 198 PELTACSII 206
>UniRef50_A5ZN23 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus obeum ATCC 29174|Rep: Putative
uncharacterized protein - Ruminococcus obeum ATCC 29174
Length = 309
Score = 33.1 bits (72), Expect = 3.1
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +1
Query: 13 TKCLREDVVVPAGAKFRISLGLPVGAVINCADNTGAKNLY 132
TK L + + P +KF I + LP+ IN D T KNLY
Sbjct: 27 TKVLNRETLEPI-SKFVIKMALPLMVFINITDGTDKKNLY 65
>UniRef50_Q6ACJ4 Cluster: Sugar ABC transporter, solute-binding
protein; n=2; Actinomycetales|Rep: Sugar ABC
transporter, solute-binding protein - Leifsonia xyli
subsp. xyli
Length = 288
Score = 31.9 bits (69), Expect = 7.1
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 70 LGLPVGAVINCADNTGAKNLYVIAVQGYQRSPEQTAGGRFRG 195
+GL A I A T K++ + ++ G + + EQ AGG + G
Sbjct: 198 MGLGAQAAIIAAGKTPGKDIQIYSIDGTRNAVEQIAGGAYNG 239
>UniRef50_Q11M94 Cluster: Oligopeptide/dipeptide ABC transporter,
ATPase subunit; n=1; Mesorhizobium sp. BNC1|Rep:
Oligopeptide/dipeptide ABC transporter, ATPase subunit -
Mesorhizobium sp. (strain BNC1)
Length = 646
Score = 31.9 bits (69), Expect = 7.1
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = -3
Query: 267 LMTTAGITFFRSSGLPFLTVATIMSPEPAAGSLFRRPLIXLDCDHIQILCPCV 109
L TA SGL +L + ++ P+P+ G + R ++ D + I+ PCV
Sbjct: 210 LSLTAAAAIVTESGLSYLGLG-VVPPDPSWGQMIRGARAYMERDPLGIIIPCV 261
>UniRef50_Q7YN74 Cluster: Ribosomal protein L14; n=2;
Eimeriorina|Rep: Ribosomal protein L14 - Eimeria tenella
Length = 121
Score = 31.9 bits (69), Expect = 7.1
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +2
Query: 191 GDMIVATVKK---GKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKG 361
GD+IV +KK + ++ +VIR +K I F DN+ V+V+ G
Sbjct: 35 GDLIVGVIKKINNTSKLIYSNIVYGIVIRLKKNINLYKKYNISFNDNSAVLVDKNLNPIG 94
Query: 362 SAITGPVAK 388
S I G + K
Sbjct: 95 SRIFGTIPK 103
>UniRef50_Q8SRQ2 Cluster: UBIQUITIN CARBOXYL-TERMINAL HYDROLASE;
n=1; Encephalitozoon cuniculi|Rep: UBIQUITIN
CARBOXYL-TERMINAL HYDROLASE - Encephalitozoon cuniculi
Length = 726
Score = 31.9 bits (69), Expect = 7.1
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -2
Query: 370 DGRALH-FALVIDYDTRIVLKVYKYSITPSERFPLPDDHCR 251
DGR LH A + +++ R VLK+ K + P R DDH R
Sbjct: 186 DGRVLHPLARLDEFENRSVLKISKITRMPDGRVLSVDDHMR 226
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 491,461,956
Number of Sequences: 1657284
Number of extensions: 10337972
Number of successful extensions: 28169
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 27347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28159
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 25191138900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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