Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP06_F_P16
         (653 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-55|AAZ66445.1|  199|Drosophila melanogaster CG33635-PA ...    82   6e-16
AY118429-1|AAM48458.1|  163|Drosophila melanogaster RH26504p pro...    37   0.021
AE014296-3393|AAN12138.1|  163|Drosophila melanogaster CG5104-PB...    37   0.021

>AE014134-55|AAZ66445.1|  199|Drosophila melanogaster CG33635-PA
           protein.
          Length = 199

 Score = 82.2 bits (194), Expect = 6e-16
 Identities = 59/172 (34%), Positives = 77/172 (44%), Gaps = 2/172 (1%)
 Frame = +3

Query: 108 MANLKSDLDQYLL--QNESRRSYKFSLPSFSTPAFLXXXXXXXXXXXXXXXXXXVQKEYF 281
           M+NLKSDLD+YLL   ++ + S+   LP    P F                       + 
Sbjct: 1   MSNLKSDLDEYLLLQSDQKKPSFNVKLPQLKVPFFSSSDPEANSFLKDSDSC------FP 54

Query: 282 TLSRTQRXXXXXXXXXXXXXXXXXXXXYIPVLLLQARKFAXXXXXXXXXXXXXXXXXYGP 461
            LSR QR                    YIP L+L+ARKFA                  G 
Sbjct: 55  KLSRLQRIVGFVACLGMGALCMTLSTFYIPFLILKARKFALLYTLGSLFFILSFCFLSGF 114

Query: 462 WAHLKSMFSKERALTTSIYSITLIATLYCALHLQSTPWTIVCAVLQVMALFW 617
            + LK MFSK R LT+  YS  LI TLYCAL  +ST +T++ AV Q++AL +
Sbjct: 115 GSFLKQMFSKPRLLTSLSYSSCLILTLYCALVAKSTAFTVLFAVAQIIALLF 166


>AY118429-1|AAM48458.1|  163|Drosophila melanogaster RH26504p
           protein.
          Length = 163

 Score = 37.1 bits (82), Expect = 0.021
 Identities = 14/54 (25%), Positives = 30/54 (55%)
 Frame = +3

Query: 456 GPWAHLKSMFSKERALTTSIYSITLIATLYCALHLQSTPWTIVCAVLQVMALFW 617
           GP+  +K MF++ R + T I  + ++ T   A+  +    T++  ++Q +A+ W
Sbjct: 87  GPFKQIKKMFAETRLIATIIVLVMMVLTFIAAIVWKKAGLTLIFIIIQSLAMTW 140


>AE014296-3393|AAN12138.1|  163|Drosophila melanogaster CG5104-PB
           protein.
          Length = 163

 Score = 37.1 bits (82), Expect = 0.021
 Identities = 14/54 (25%), Positives = 30/54 (55%)
 Frame = +3

Query: 456 GPWAHLKSMFSKERALTTSIYSITLIATLYCALHLQSTPWTIVCAVLQVMALFW 617
           GP+  +K MF++ R + T I  + ++ T   A+  +    T++  ++Q +A+ W
Sbjct: 87  GPFKQIKKMFAETRLIATIIVLVMMVLTFIAAIVWKKAGLTLIFIIIQSLAMTW 140


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,838,176
Number of Sequences: 53049
Number of extensions: 476519
Number of successful extensions: 1045
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1044
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)